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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0189790 |
| Transcript ID | Lj4g3v0189790.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356510820|ref|XP_003524132.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | – | – | |
| Phobius | 1 | 26 | 26 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| TMHMM | 7 | 26 | 20 | – | – | |
| Phobius | 7 | 18 | 12 | – | – | |
| PANTHER | 9 | 134 | 126 | 0 | – | |
| PANTHER | 9 | 134 | 126 | 0 | – | |
| Phobius | 19 | 26 | 8 | – | – | |
| Phobius | 27 | 890 | 864 | – | – | |
| Gene3D | 35 | 345 | 311 | 5.20E-78 | ||
| Pfam | 37 | 72 | 36 | 1.20E-10 | ||
| SUPERFAMILY | 92 | 414 | 323 | 2.51E-63 | – | |
| SMART | 111 | 137 | 27 | 130 | – | |
| SMART | 135 | 159 | 25 | 28 | ||
| SMART | 183 | 207 | 25 | 140 | ||
| PANTHER | 218 | 232 | 15 | 0 | – | |
| PANTHER | 218 | 232 | 15 | 0 | – | |
| SMART | 255 | 279 | 25 | 44 | ||
| SMART | 303 | 322 | 20 | 250 | – | |
| SMART | 303 | 327 | 25 | 4.9 | ||
| Gene3D | 350 | 598 | 249 | 8.40E-69 | ||
| SMART | 353 | 376 | 24 | 340 | ||
| PANTHER | 354 | 544 | 191 | 0 | – | |
| PANTHER | 354 | 544 | 191 | 0 | – | |
| PRINTS | 379 | 392 | 14 | 2.30E-06 | – | |
| SMART | 424 | 447 | 24 | 240 | ||
| SUPERFAMILY | 424 | 702 | 279 | 5.58E-57 | ||
| SMART | 448 | 472 | 25 | 97 | ||
| SMART | 448 | 463 | 16 | 390 | – | |
| SMART | 496 | 520 | 25 | 250 | ||
| Pfam | 522 | 581 | 60 | 2.50E-06 | ||
| SMART | 544 | 570 | 27 | 260 | – | |
| SMART | 544 | 568 | 25 | 100 | ||
| Gene3D | 599 | 865 | 267 | 3.40E-60 | ||
| PANTHER | 606 | 1150 | 545 | 0 | – | |
| PANTHER | 606 | 1150 | 545 | 0 | – | |
| SUPERFAMILY | 664 | 854 | 191 | 4.85E-43 | ||
| SMART | 687 | 711 | 25 | 38 | ||
| SMART | 735 | 759 | 25 | 13 | ||
| Pfam | 761 | 821 | 61 | 8.50E-07 | ||
| SMART | 808 | 834 | 27 | 81 | – | |
| PRINTS | 808 | 821 | 14 | 2.30E-06 | – | |
| SMART | 808 | 830 | 23 | 30 | ||
| SMART | 832 | 863 | 32 | 24 | ||
| Gene3D | 878 | 973 | 96 | 2.00E-06 | ||
| TMHMM | 891 | 913 | 23 | – | – | |
| Phobius | 891 | 914 | 24 | – | – | |
| Phobius | 915 | 1168 | 254 | – | – | |
| SUPERFAMILY | 947 | 1158 | 212 | 1.15E-55 | ||
| ProSiteProfiles | 966 | 1168 | 203 | 30.407 | ||
| SMART | 966 | 1166 | 201 | 5.90E-09 | ||
| Pfam | 971 | 1151 | 181 | 3.00E-32 | ||
| ProSitePatterns | 972 | 995 | 24 | – | ||
| Gene3D | 974 | 1025 | 52 | 1.10E-15 | – | |
| Gene3D | 1026 | 1152 | 127 | 3.90E-28 | – | |
| ProSitePatterns | 1097 | 1109 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj4g3v0189790.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0189790.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.