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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1120510 |
| Transcript ID | Lj4g3v1120510.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Receptor-like protein kinase HAIKU2 [Medicago truncatula] gi|357446137|ref|XP_003593346.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 13 | 13 | – | – | |
| Phobius | 1 | 32 | 32 | – | – | |
| SignalP | 1 | 32 | 32 | – | – | |
| PANTHER | 1 | 271 | 271 | 0 | – | |
| PANTHER | 1 | 271 | 271 | 0 | – | |
| TMHMM | 13 | 32 | 20 | – | – | |
| Phobius | 14 | 27 | 14 | – | – | |
| Phobius | 28 | 32 | 5 | – | – | |
| Gene3D | 31 | 203 | 173 | 2.30E-31 | ||
| Pfam | 32 | 71 | 40 | 7.10E-09 | ||
| Phobius | 33 | 613 | 581 | – | – | |
| SUPERFAMILY | 55 | 364 | 310 | 5.27E-50 | ||
| SMART | 170 | 195 | 26 | 99 | ||
| Gene3D | 204 | 364 | 161 | 4.30E-44 | ||
| SMART | 219 | 243 | 25 | 37 | ||
| SUPERFAMILY | 290 | 574 | 285 | 1.26E-48 | – | |
| PANTHER | 301 | 704 | 404 | 0 | – | |
| PANTHER | 301 | 704 | 404 | 0 | – | |
| SMART | 314 | 338 | 25 | 280 | ||
| Gene3D | 370 | 575 | 206 | 1.60E-56 | ||
| SMART | 483 | 507 | 25 | 12 | ||
| Pfam | 485 | 507 | 23 | 0.11 | ||
| Pfam | 509 | 567 | 59 | 1.10E-08 | ||
| SMART | 531 | 554 | 24 | 140 | ||
| TMHMM | 613 | 635 | 23 | – | – | |
| Phobius | 614 | 634 | 21 | – | – | |
| Phobius | 635 | 976 | 342 | – | – | |
| SUPERFAMILY | 653 | 959 | 307 | 3.91E-72 | ||
| Gene3D | 667 | 772 | 106 | 1.20E-16 | – | |
| ProSiteProfiles | 672 | 960 | 289 | 37.305 | ||
| SMART | 672 | 964 | 293 | 4.30E-36 | ||
| Pfam | 675 | 955 | 281 | 7.50E-45 | ||
| ProSitePatterns | 678 | 700 | 23 | – | ||
| CDD | 678 | 960 | 283 | 2.96E-87 | – | |
| PANTHER | 722 | 957 | 236 | 0 | – | |
| PANTHER | 722 | 957 | 236 | 0 | – | |
| Gene3D | 773 | 960 | 188 | 3.90E-44 | – | |
| ProSitePatterns | 809 | 821 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj4g3v1120510.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1120510.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.