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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1463050 |
| Transcript ID | Lj4g3v1463050.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540-like [Glycine max] gi|356562708|ref|XP_003549611.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| PANTHER | 5 | 80 | 76 | 0 | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| PANTHER | 5 | 80 | 76 | 0 | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| Phobius | 18 | 26 | 9 | – | – | |
| Phobius | 27 | 706 | 680 | – | – | |
| Pfam | 28 | 67 | 40 | 2.50E-08 | ||
| Gene3D | 29 | 241 | 213 | 3.30E-53 | ||
| SUPERFAMILY | 53 | 256 | 204 | 3.03E-40 | ||
| PANTHER | 105 | 208 | 104 | 0 | – | |
| PANTHER | 105 | 208 | 104 | 0 | – | |
| SMART | 117 | 139 | 23 | 160 | ||
| SMART | 117 | 143 | 27 | 350 | – | |
| PRINTS | 120 | 133 | 14 | 6.80E-05 | – | |
| SMART | 141 | 164 | 24 | 31 | ||
| SMART | 165 | 189 | 25 | 29 | ||
| SMART | 165 | 191 | 27 | 120 | – | |
| SUPERFAMILY | 203 | 539 | 337 | 2.12E-69 | – | |
| PANTHER | 240 | 525 | 286 | 0 | – | |
| PANTHER | 240 | 525 | 286 | 0 | – | |
| Gene3D | 242 | 463 | 222 | 1.00E-66 | ||
| SMART | 262 | 288 | 27 | 700 | – | |
| SMART | 286 | 310 | 25 | 17 | ||
| Pfam | 288 | 347 | 60 | 1.70E-08 | ||
| SMART | 334 | 358 | 25 | 8.4 | ||
| SMART | 382 | 411 | 30 | 290 | – | |
| SMART | 382 | 406 | 25 | 40 | ||
| Pfam | 464 | 515 | 52 | 1.10E-07 | ||
| Gene3D | 464 | 666 | 203 | 1.70E-60 | ||
| SUPERFAMILY | 467 | 694 | 228 | 1.41E-40 | – | |
| SMART | 478 | 501 | 24 | 28 | – | |
| SMART | 478 | 502 | 25 | 16 | ||
| SMART | 502 | 525 | 24 | 500 | – | |
| PANTHER | 550 | 944 | 395 | 0 | – | |
| SMART | 550 | 574 | 25 | 46 | ||
| PANTHER | 550 | 944 | 395 | 0 | – | |
| SMART | 574 | 600 | 27 | 710 | – | |
| Pfam | 605 | 623 | 19 | 0.84 | ||
| PRINTS | 623 | 636 | 14 | 6.80E-05 | – | |
| SMART | 623 | 648 | 26 | 130 | – | |
| SMART | 646 | 679 | 34 | 320 | ||
| TMHMM | 707 | 729 | 23 | – | – | |
| Phobius | 707 | 728 | 22 | – | – | |
| Gene3D | 718 | 834 | 117 | 5.60E-16 | – | |
| Phobius | 729 | 970 | 242 | – | – | |
| SUPERFAMILY | 758 | 944 | 187 | 1.50E-46 | ||
| ProSiteProfiles | 770 | 970 | 201 | 26.549 | ||
| SMART | 770 | 970 | 201 | 3.60E-10 | ||
| Pfam | 773 | 944 | 172 | 1.60E-29 | ||
| ProSitePatterns | 776 | 802 | 27 | – | ||
| Gene3D | 835 | 944 | 110 | 2.70E-25 | – | |
| ProSitePatterns | 893 | 905 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj4g3v1463050.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1463050.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.