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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1984580 |
| Transcript ID | Lj6g3v1984580.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230-like [Glycine max] gi|356555431|ref|XP_003546035.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 20 | 20 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| SignalP | 1 | 18 | 18 | – | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| Phobius | 16 | 20 | 5 | – | – | |
| Phobius | 21 | 312 | 292 | – | – | |
| SUPERFAMILY | 46 | 246 | 201 | 6.80E-39 | ||
| PANTHER | 46 | 264 | 219 | 5.90E-286 | – | |
| PANTHER | 46 | 264 | 219 | 5.90E-286 | – | |
| Gene3D | 47 | 246 | 200 | 6.10E-41 | ||
| SMART | 81 | 105 | 25 | 53 | ||
| ProSiteProfiles | 83 | 105 | 23 | 6.133 | ||
| Pfam | 83 | 102 | 20 | 0.17 | ||
| Pfam | 138 | 195 | 58 | 5.60E-09 | ||
| ProSiteProfiles | 139 | 160 | 22 | 8.035 | ||
| PRINTS | 140 | 153 | 14 | 8.60E-05 | – | |
| PRINTS | 159 | 172 | 14 | 8.60E-05 | – | |
| SMART | 159 | 181 | 23 | 0.06 | ||
| ProSiteProfiles | 161 | 183 | 23 | 8.251 | ||
| ProSiteProfiles | 184 | 206 | 23 | 7.003 | ||
| SMART | 205 | 228 | 24 | 260 | ||
| ProSiteProfiles | 207 | 230 | 24 | 5.248 | ||
| ProSiteProfiles | 231 | 252 | 22 | 5.571 | ||
| MobiDBLite | 270 | 310 | 41 | – | – | |
| Gene3D | 281 | 349 | 69 | 8.50E-09 | ||
| PANTHER | 288 | 354 | 67 | 5.90E-286 | – | |
| PANTHER | 288 | 354 | 67 | 5.90E-286 | – | |
| Phobius | 313 | 338 | 26 | – | – | |
| TMHMM | 315 | 337 | 23 | – | – | |
| Phobius | 339 | 694 | 356 | – | – | |
| PANTHER | 374 | 508 | 135 | 5.90E-286 | – | |
| PANTHER | 374 | 508 | 135 | 5.90E-286 | – | |
| Gene3D | 389 | 423 | 35 | 8.50E-09 | ||
| SUPERFAMILY | 395 | 506 | 112 | 2.42E-46 | ||
| ProSiteProfiles | 415 | 691 | 277 | 18.591 | ||
| Pfam | 419 | 588 | 170 | 1.90E-20 | ||
| Gene3D | 424 | 479 | 56 | 1.40E-12 | – | |
| Gene3D | 480 | 500 | 21 | 3.60E-14 | – | |
| PANTHER | 530 | 684 | 155 | 5.90E-286 | – | |
| PANTHER | 530 | 684 | 155 | 5.90E-286 | – | |
| SUPERFAMILY | 533 | 684 | 152 | 2.42E-46 | ||
| Gene3D | 535 | 591 | 57 | 3.60E-14 | – | |
| Gene3D | 598 | 681 | 84 | 3.20E-06 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj6g3v1984580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1984580.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.