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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0222600 |
| Transcript ID | LotjaGi1g1v0222600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Endoribonuclease YbeY; TAIR: AT2G25870.1 haloacid dehalogenase-like hydrolase family protein; Swiss-Prot: sp|Q5XD45|Y533_STRP6 Putative phosphatase M6_Spy0533; TrEMBL-Plants: tr|A0A0B2SRP5|A0A0B2SRP5_GLYSO Putative rRNA maturation factor; Found in the gene: LotjaGi1g1v0222600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:49598933..49607380) extracted from Lotus japonicus Gifu genome v1.2.
TACATGCTTCCCCGTTTCTGTAACTTCCTCCGCCGCCACCCTTCTCTCGACATGGCGCGCGCCATCGGGCCTCACCTCCA TCATTTCCATTATGCCTCACCCGCCACCCGTTTCCCTCTCTCTCCTTCAATCTCTTCTCCGCTCCTCCGCCATAACGAAC CGTCGGGGAAGAAGAAGAAGATTCAGCCTTTTGTGGTATCAATGGGGGGACATAGCCATAGGGAGTATAGGAAAGTGAGG AGGCGAGCACCGAAGAGCAAAGAGAAGCAACTGGAGCTCTGCGCCGACATTTGCATCGAAGAGGATTTGCCTGACGATCC TGAAATCTTTGTAGGTCACTGCCCAAATTCATCATCCTTCTGCAACTTGAATTGCTCTTGGGTTTTTGATTTGCTCTTGT TAATTCCTGTTCATTTAATGTTTTTATTTTTAAATAAATTCAAACTGATATTTATATTGGAGTGCTGCATTATTTGTTCT TTTTGGTGGCAGAACATCGCGGAGATGCTTCGCCTAAATGTTCCAACGGCAATGAAACTGGCATTTGATGGTTTGAAAGG TTCAGGGTATAAAACAAGAGATACTGCTATAAGTGATGTTGGCGAGTTTCAAAGTGTTGAGTTATCAGTGCTTCTTTGCA ATGATGTGTTTATTCGACAACTTAATAAGGAATGGAGAGGTGAAGATCATGCTACTGATGTTCTCTCAATGTCACAACAT GTACCTGGCCTCAAGCTTCCTATTGTAAGAATTGCATTAACCTTTCTGATTATAACTTGCCTGCCCAATCAATGAGACTT GGAACTTACATGGGATGCCATGTTTTTGATGAATTTTGTTGTTTGCAGCTTATGTTGGGTGATATCGTAATTTCTGTAGA GACAGCTGCTAGACAAGCTGAGGAAAGGGGACACACTCTTCTTGATGAGATCCGTATCCTCATGGTTTGTTTCATGATAT TCAGACTATTTTATGCCTTGTGTGTTAGATTACATTATTTCCCTTCTACAGGCATGATTGAATTCACATGAGTGATAAGT TTGCTTACCCTTTATATCAGTTTCACATTGAATTCTGAATTCACGTTATTTCCCTTCTACAGGCGTGATAAATTTATATA TTTAAATAAGGTTGATACTTTAAACTAATCATTTAAAGTTTAAAATCTGTGTTGTTAGTCATTAATCTGTAAATGGATAC TAGTTTACGAAAGAGAGAAGAAAAGAAAACTTAAAGTAACAGTTGACACCCATGAAGCATATGTATTTACTAATAAGGGG GATGGGTGGAAGGGATAGTCTGCATTGCAAGACTCACTGCTTTGAAACCGTAAAAGTCTAATTCTTGGTTAGACATACAT AGGTGCTTAAATAAAACTTTTGATCCATAAGATAGAGAGTGAACTGGTTCTTCATCTGCTTCTAAGCATGTTGGTTTTGC TCTTCTAAGACCGTGTATGTGAACTAAAAGCTTAGACTTGATAATATTAATCAATTCTTTTGTGAAGGTTCATGGTTTGT TACATCTTTTGGGATTCGATCATGAAATAAGTGAAGAAGCGGAAGTAGAAATGGAGAAACAGGAGGAACTACTTTTGAAG AGTCTTGATTGGAAAGGAAAAGGGCTAATAAAGAGTGCATATGATATTGTAACAAATTCTAATTCTCACCAAGACTGTTC AGATGGTAATTGCATTTTTTACTAGCATCATTGATGAACTTGTATCATATTTTTGTTTTATATGCTTCCCGCTAATTCAA GCAACTGTTATATGCATAATAAAGTATGTGGGTGAATAATCTCATTGATGAATTTTTAAAAGACAGGAAGCAAGAAGGAA GTCTTAGATTTTACAAACCAAAGTTTAGCTATATCTTCTGTGATATGGATGGTAAGATTGCTGTGAAACATACTCTTTAG ATATTCATTTATCCTTTCTTTGAGTATTAATAGAATGCTCTATTATATAAAGGAACATTGCTGAACAGCAGAAGTCAAAT TTCTAGTGCAACTGCCAAGGCTCTGAGAGAAGCCTCGTCAAGTGGGGTGAAAATTGTGATAGCTACTGGAAAAGTAAGAC TATTCATCAGGGTATCAGGCTATTTATCTTATATTGGCTAATACATATGAATCCTTGGTTGCTGCATCTGCTACATATTT CTTTGTGCATTTTCTAATATTAATATTGACATTCATATAGCTGAAATTTGTCTGCTCATCAGTTTTTTACATTGTGAAAT AGGCTCGTCCAGCAGTGATAGATATTTTTAAGATGGTGGATTTAGCTGGAAAAGATGGCATTGTTTCAGAATTTTCACCT GGGGTTTTCTTACAGGTAATTCTGTGTCTTTTTAATGTTCATGATGCTGCTTGATCCAACAAGGCACTCCATCTATGTGG CTGAAAGCATCTTTATTTTTTTTTGTAATAAAATCTCTTCTCTTACAAACTCATTTTTCTCAGATTTGGGAAAATGGGGG AAGAGAAAGAGGAAGAGGGAGATGGGTGGCTATGGTGTTTAAGAAGTAGAAGAAGGGTGAGTGAAGAGAAGGGTGGGAGG ATCGCCGCCAATCTCCAGAAGACACCGAACCGCCGCTCCCAGCCGCGAGTTTCACAATGTAACCTCGATCTGCTTCTCTT TCTCGGTCTCTCTCCCTCTGCAAAATCTTTCTCTCTCTTTGAACTCTCCCTCTCTCACCCATATGTTTGTGCAATGGCAG TGATGAGGAAAAGGCATAGATGGGAAGCGGAATAGTCTTTAGGGTTGAGATCTGTTAGAATGTGAGAAAGTGGAAAGGTG GTGGTATCTGCCATAACTGTTGCTTTGGTTGCTAGGGATGAGAGATGACGATGTAAAGAGATAGAAGAAATTTTTTAGAT CTGTTGCAAAGCTGCCCTATCTCTGTTCAAAATGTTAAATCGGGATGTTTAGAGGAGGAGGAGGAGGAGGAGGAGGAAGA GAAAGATGTGGTCATTGGGGGGGTTGGTGTGGTGGTGGCCAGAATGAGATGTGGAGGTTATGAAGGAAGAGCAATGAGAA AGAAGAGGAAGAAGATTAGAAGATGAAGAGGGAAGAGGAAGGCCTGAAAATGATTTTTAAAAAAAATTAGAGGGACCAAA ATTGATGCGAAAAAAATCCACGTAGTTACCCAATTGACTAAACCTACCACGTGGCTATTGACTAAGTCAAAATTGATGAC ACGTAGGCAGAAGATGTAATTTGATTATAAAAAATCTCAGGGATGGCATTTTGAAGATTTTTTTTCAGGGACCCAATTTG ATTTCTCTTACAAAGTCAGGGACTTAAAACATATTTAAGCCAATAACTGATAGATAATCATAAACTCTGATAGGAACCAA ATTATTATGATAGAATAATTATACAACTCTGGTTTTCGAGAGCCAGCCTCTCCTAATTCTGGAATTTGAGAGTCCAGATC TCTCCCACCATAACACCCAACTTCTGAATAATCCCAACTATCTTACATAACTCCTATTTATAACCACTCCTATATGATTT AAATTCAAACCATAGCAGTTACCTAACTGCTTTAATCATAAAATTACCCAACTAATAAATTAAATAATAATAACTTCCTA ACTGCTACTGTTCACGAGTACTGTTCATGCAGTTCCCTATCAATACCCCGCCCTAAAAGATCCACCTTGTCCCCAAGGTG ATAATTCAGAAAAGTTTCTTGCACTATGGAAGGAAGCCTGAATCTGGTGGCTTTGCCGGAGGTTGCTTGGTGGTTACCAA ATGGCATGGAATACAGCCCAAGGTGTTGGGATCACCGACAAAGAGGTCTGGTGGCTTAGCCGGCAGACGATTGATGGTCA TTGTCTTGCAACGGAGTGAGTCCGGCGGTTTTCGTGGTGGCCTTCCCGTGTGAACTGCAACGCTGTTCTGGAATCGCAGA GTCTCAACCTTTGTCACCCTGAATTTCATCTTTACTGTAAACTCAAAATACAGCGATGGTGAGCGTTCAACTCGCAATTT CAGTCTTCCTGTTCCATCGAACCCTAAGTCAGCCTTTTGGGGCCAAACAGTGGATTCGTCCTTCGTTTCCCGTTGAAGGC TGCAATCCTGTCTTTCCACCATGGTCGAACCATGCTGCAGCAACTGCTGGATGAGGGCGATCTTCTTTATTTCGTCCTTT CTTTGACGTGCGATTTCCTCTCTCAAATCTGCAATCCCCTTCTTTATTTGTCGAAGAAGGCCAATTGCTGTCTCCTTCTC CATTTCTTCACGATTCATTTGCACCACAGCACCTGGATGGTGCTCTGATACCAAATTGATAGGAACCGAATTATTGTGAT AGAATGTTTATACAACTCTGGTTTTCGAGAGCCAGCCTCTCCTAATTCTGGAATTTGAGAGTCCAGACCTCTCCCACCAT AACACCCAACTTCTGAATAAACCCAACCATCTTACATAACTCCTATTTATAACCACTCCTATATGATTTAAATTCAAACC ATAGCAGTTACCTAACTGCTTTAATCATAAAATTACCCAACTAATAAATTAAATAATAGTAACTGCTACTGTTCACGAGT ACTGTTCATGCAGTTCCCTATCAAACTCTTATTCATAATCTAATATGAACAATTTATGAAAAGAAGCTCGAAACAACTTA TAGGTAGGTCATAAGCTATTCACGTATGCTCTCTCAAAACTTGCATAAACGCTACACTATAAGATAAGCTCTTACAAACA TAGCCTAAATTTATAAAAAGGTGCCTGAAAGAGAAATGATTGTAAGATTATCCACTAGCCAAAATTTAGATATATCTTTA AGGCAAAATTTTTAGCAATTAAAATTTGATGCTCTTCAAATTAAATGGGTTACCGACATGCAAGTGAAAAAGTAAATTCA AGTCAAAGGAAGAGTTAATGATCGATTTTTATTCTATGACTATGAGAATCAAGAAAGGTTACTTGCAATAAAAAGGTGTC TGAGAGAGAGAGAGAGAGAGAGAAAGTAATTAGAAGCGTCTATGAGCCAAAATTTAGATGTCTTGATTCTTGAATGTCAA GTGTACAATTAAAATTTGAAGGTTTTCAAATTAAAGGGTTTAATATGTTAATCATTCAATTACGTATCCAAAGCTGAGAT GGAGAAGTTATAATGGGGTGGTGGAACTGGTACTGCTTATTAAGGTAGTCTTTGGGAGTTGAAAAGTCAAGAAAGGAGGA GCTCAGATTCATTTAGAAGTGTTGATGTGGCATGAAATGAGAATGGACCATGATTCCAGGGTTTGTTTGTTTCAGTTTTT TTAGGTTCCTGCTATTATCTTGTGCCTAATATTTCATACACCATGATTCCAGGGTTTGCTTGTTTATGGTAGACAAGGTC AGGAAATATTTAGGAGCAACTTAGATCCAAACATCTGTAGAGAGGTAGTAGCTTCTTGCACCCTCTTTTCATTTCGCAAA ATACTTTTCCTTCAAAAGAAACAATGTTTTTTTGGACTTGAACATATCATGCCTCCTTTGTCCTTTTGGACTTAATTGCA AAGGTTTGCTGTGGCCTTTTCACTTTATCACTCATTCCTCAATTGCATGCATATATATGGTCTAAGGTTTAGGGTTTTTT ACTAAACTCCTTTTTAGCTGTGAATCAAGCCCTGACCCACCTCAGTAACCAGCATAAGTTTTGTTTTGTTTTTATCCAAA CGAGAAAAAGAAACATTTATTATCCAGCTCACTCACAGCATCCATGGAGATTATTTTCTTATCCAGTTTTCGACATTACT GACAGACTGGGGTTTCATGCTTCAAATCGAAATATCTAATTGTTAACTGAGGGCTTCATTGCTTTTCAGGAAAACTCTTC TTGCCATTCTATAAAATAAAAAGTTGTGTTCTTTTACATGCAGGCATGTCTTTACTCTTTGGAGAGTAAGGTTCCACTTA TTGCATTTTCAGAAGGTCGTTGCTTAACCCTTTTTCACGACCCACTTGTTGATTCACTACATACAGTATACCATGAACCG AAGGTACCTCATTTTTGTATTATGTATGCAGTCTTTCATAATATTATGCCATTTGCTTTGTATATTGAGCTAAAAATACT TTACAGGCTGAGATTATGCCTTCTGTTGAACATCTTCTGGCTTCAGCAGACATACAGGTATTCTCTAGGACAAATCCTGT CCCTGTTTACTGTTTTATGTGCTATATGTTCATTTATAGTATAATTCGCAAATAATTTGATGCAGCTATTAACTGCTGAC TTCTAAAGGTCTTCCATGCCAAGAATGGTATTGGCTCTGATATCATATTATGGAACAACTATTCTATAAGCTGAAGCTAT TGGGTGAAAGACATGTGAATGATTTTGCAGTATATTTCTGACATGCCTTCTCACTCAATGGCTCATTAAGCATGAAGCAT GGACAAAACACATACTCACCTATTTTGTGCTGAAAATCAAGTTATATATATTAGAAAAATTAGGGTCAATAAAGATCGAA CTCTAGACCACTTTGTCATAGAGGTTTTGATACTGCATTAACTAGGAAAAAGAAAAATATTTGGATTACCTATTTCAGGT GCAAGACGATGTTGTCCTTCTCATTTAAGAATTAAGATTCTCATTTAATGAGCAATACTAATACTATTGCTCATTTACAA AAAAAAAATTGGTGTTAGAAGTCCCACATTGGCTAGAGATAGAGCATAGATAGCATTTATAAGGGTAGTGCAAACCTCAA CTCTTGAGCTAGCTTTTGGGTTGAGTTAGGTCTCTCTAATTCTAATATGGTATCAGAGTCTATCCTAGATCCATTTGTTG TTTGTTGTGGAGATTTCCCATATTTGGGCCACCCGTTGTTGATCCCACGTTCCAGTTTGTTCAGTCCTGGACGTGAGGGG TGTGTTAGGAGTCCCACATTGACTAGAGTTAGAGCATAGATAGTAAGAGTAGTGTAAACCTCAACTCTTGAGCTAGCTTT TGCGTTGATTTAGGTCTCTCTAATTCTAATATTTGGAAACCATTTGCTCATGTGAGAAGAATAAAAATGTTGGTGAGAGT CTGGGTCAGATAGACAATGGTGCGACTGGCTCCTTGTATCTTTAGTCTTCTAGGCAAAGTAATGGTGGGCCTGTTTGATG CGTGATAAGAGCCAACTAGGCTCAAGTATTGAGAAGTTTATATGGTGTCCATATCATTTGTTTAATTTATATGTCAAACA GATAATGGCTTTATATTATAGTTCTTACAACGTTAGAAGAATATTTCTTTCCTTTTCTTTGCTTCATTGCTTTATTGTAT TAAGTGAATATTACACTCAAGTTTATTTCTGACCGCATCTTATCCTCAAATACGATTGCAGTAAAGAACCTAACTCAAGT TATTAATATTCTTATTCTTTTAACTTAAAGATCTTGTTAACACTAATATTTGGTTATTCAGAAAATGATTTTCATGGACA CTGCCCAGAGGGTGGCTAATACTTTACGGCCACACTGGTCAGATGCCACAAGAGGTCGTGCCACTGTTGTTCAAGCTGTG CCAGACATGCTGGAAATTGTACCATTGGGAACATCAAAAGGGAATGGAGTGAAAGTGCTGCTAGATCATTTGGGGGTTAC TGCCAACGAGGTATCACAAATATATGTTCACTTCTGAAATTTGTCTCTTTGCCAAACACTCACAGTAACATTATCAACAT TTATGAAACGGGTGGTAATATTTTGATAATTTTTTTTGAAACATCAAACATGTAATATTTAAATTAACTTGAATAGGAAT TTGAATGGCATTGCATACGTTGTTCCTAACCTATTGTTGAAATGTGATAGAACCCTGAAAATTATAGAAGTATTATTGAA GAAAACCCTCATTCTTAAATTAGGAATTAGAGTCAGTTACAGTAGAGATACCAAACACACCTGAAACTGAGAGAGATACC CAATACTCTCCCTAAACCCTAAATCCCAAATGAATACAAAGATAACCATCCCTCACTAACTCCCTCTTATTTATAGGCAA CAAGCTTTATTAAACTTCTAACTAACCCTCTATCTCTCTAACAAACCCATAACACTTGTTAACTAAGCTATTAACCTTGA GTACCTATCAAAATGTAAACCATTTAATTATAGCAAAGTTTGACATGATTTTAAGATTGCATTTCCTATATTGTAGCTAT CTTTTGAATTTTATCATTCATGTGTGTAGGGGATAAAACAGCCCATGCAAATGTGGTATGCTTGTTGATATGGTGTGTCA ATTTTATTTCTAATCTTCAACCGAAATTTCTTGAATGCAGATAATGGCTATTGGTGACGGGGAAAATGATATCGAGATGC TTGAGCTGGCTTCTCTAGGCATCGCACTTAGTAATGGATCAGAGAGGACCAAAGCTGTGGCTAGCGTAATTGGTTTGAGC AATGATGAAGATGGTGTAGCAGATGCCATATACCGGTATGCATTCTAA
CDS sequence (LotjaGi1g1v0222600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTCCCCGTTTCTGTAACTTCCTCCGCCGCCACCCTTCTCTCGACATGGCGCGCGCCATCGGGCCTCACCTCCATCA TTTCCATTATGCCTCACCCGCCACCCGTTTCCCTCTCTCTCCTTCAATCTCTTCTCCGCTCCTCCGCCATAACGAACCGT CGGGGAAGAAGAAGAAGATTCAGCCTTTTGTGGTATCAATGGGGGGACATAGCCATAGGGAGTATAGGAAAGTGAGGAGG CGAGCACCGAAGAGCAAAGAGAAGCAACTGGAGCTCTGCGCCGACATTTGCATCGAAGAGGATTTGCCTGACGATCCTGA AATCTTTAACATCGCGGAGATGCTTCGCCTAAATGTTCCAACGGCAATGAAACTGGCATTTGATGGTTTGAAAGGTTCAG GGTATAAAACAAGAGATACTGCTATAAGTGATGTTGGCGAGTTTCAAAGTGTTGAGTTATCAGTGCTTCTTTGCAATGAT GTGTTTATTCGACAACTTAATAAGGAATGGAGAGGTGAAGATCATGCTACTGATGTTCTCTCAATGTCACAACATGTACC TGGCCTCAAGCTTCCTATTCTTATGTTGGGTGATATCGTAATTTCTGTAGAGACAGCTGCTAGACAAGCTGAGGAAAGGG GACACACTCTTCTTGATGAGATCCGTATCCTCATGGTTCATGGTTTGTTACATCTTTTGGGATTCGATCATGAAATAAGT GAAGAAGCGGAAGTAGAAATGGAGAAACAGGAGGAACTACTTTTGAAGAGTCTTGATTGGAAAGGAAAAGGGCTAATAAA GAGTGCATATGATATTGTAACAAATTCTAATTCTCACCAAGACTGTTCAGATGATGAATTTTTAAAAGACAGGAAGCAAG AAGGAAGTCTTAGATTTTACAAACCAAAGTTTAGCTATATCTTCTGTGATATGGATGGAACATTGCTGAACAGCAGAAGT CAAATTTCTAGTGCAACTGCCAAGGCTCTGAGAGAAGCCTCGTCAAGTGGGGTGAAAATTGTGATAGCTACTGGAAAAGC TCGTCCAGCAGTGATAGATATTTTTAAGATGGTGGATTTAGCTGGAAAAGATGGCATTGTTTCAGAATTTTCACCTGGGG TTTTCTTACAGGGTTTGCTTGTTTATGGTAGACAAGGTCAGGAAATATTTAGGAGCAACTTAGATCCAAACATCTGTAGA GAGGCATGTCTTTACTCTTTGGAGAGTAAGGTTCCACTTATTGCATTTTCAGAAGGTCGTTGCTTAACCCTTTTTCACGA CCCACTTGTTGATTCACTACATACAGTATACCATGAACCGAAGGCTGAGATTATGCCTTCTGTTGAACATCTTCTGGCTT CAGCAGACATACAGAAAATGATTTTCATGGACACTGCCCAGAGGGTGGCTAATACTTTACGGCCACACTGGTCAGATGCC ACAAGAGGTCGTGCCACTGTTGTTCAAGCTGTGCCAGACATGCTGGAAATTGTACCATTGGGAACATCAAAAGGGAATGG AGTGAAAGTGCTGCTAGATCATTTGGGGGTTACTGCCAACGAGATAATGGCTATTGGTGACGGGGAAAATGATATCGAGA TGCTTGAGCTGGCTTCTCTAGGCATCGCACTTAGTAATGGATCAGAGAGGACCAAAGCTGTGGCTAGCGTAATTGGTTTG AGCAATGATGAAGATGGTGTAGCAGATGCCATATACCGGTATGCATTCTAA
Protein sequence (LotjaGi1g1v0222600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLPRFCNFLRRHPSLDMARAIGPHLHHFHYASPATRFPLSPSISSPLLRHNEPSGKKKKIQPFVVSMGGHSHREYRKVRR RAPKSKEKQLELCADICIEEDLPDDPEIFNIAEMLRLNVPTAMKLAFDGLKGSGYKTRDTAISDVGEFQSVELSVLLCND VFIRQLNKEWRGEDHATDVLSMSQHVPGLKLPILMLGDIVISVETAARQAEERGHTLLDEIRILMVHGLLHLLGFDHEIS EEAEVEMEKQEELLLKSLDWKGKGLIKSAYDIVTNSNSHQDCSDDEFLKDRKQEGSLRFYKPKFSYIFCDMDGTLLNSRS QISSATAKALREASSSGVKIVIATGKARPAVIDIFKMVDLAGKDGIVSEFSPGVFLQGLLVYGRQGQEIFRSNLDPNICR EACLYSLESKVPLIAFSEGRCLTLFHDPLVDSLHTVYHEPKAEIMPSVEHLLASADIQKMIFMDTAQRVANTLRPHWSDA TRGRATVVQAVPDMLEIVPLGTSKGNGVKVLLDHLGVTANEIMAIGDGENDIEMLELASLGIALSNGSERTKAVASVIGL SNDEDGVADAIYRYAF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 32 | 576 | 545 | 5.6E-274 | – | |
| PANTHER | 32 | 576 | 545 | 5.6E-274 | – | |
| Hamap | 89 | 267 | 179 | 21.205 | ||
| Gene3D | 131 | 265 | 135 | 2.1E-41 | ||
| SUPERFAMILY | 147 | 263 | 117 | 1.19E-35 | – | |
| Pfam | 148 | 257 | 110 | 1.5E-32 | ||
| TIGRFAM | 152 | 258 | 107 | 2.3E-30 | ||
| ProSitePatterns | 227 | 237 | 11 | - | ||
| SUPERFAMILY | 300 | 574 | 275 | 6.01E-57 | ||
| ProSitePatterns | 306 | 317 | 12 | - | – | |
| TIGRFAM | 306 | 543 | 238 | 2.6E-21 | ||
| TIGRFAM | 306 | 571 | 266 | 3.9E-48 | ||
| CDD | 307 | 573 | 267 | 9.68297E-57 | – | |
| Pfam | 307 | 571 | 265 | 1.0E-49 | – | |
| SFLD | 307 | 575 | 269 | 3.223E-44 | – | |
| Gene3D | 307 | 571 | 265 | 9.3E-62 | ||
| SFLD | 307 | 575 | 269 | 3.223E-44 | – | |
| Gene3D | 393 | 500 | 108 | 9.3E-62 | – | |
| ProSitePatterns | 525 | 547 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Biological process | RRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi1g1v0222600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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