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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0306600 |
| Transcript ID | LotjaGi1g1v0306600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich receptor-like kinase family protein; TAIR: AT3G56370.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9LY03|IRK_ARATH Probable LRR receptor-like serine/threonine-protein kinase IRK; TrEMBL-Plants: tr|I1JYC1|I1JYC1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0306600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:74760106..74764706) extracted from Lotus japonicus Gifu genome v1.2.
TAAAAATTCTGTGTTCGCAGCTCACACAGCACACAAGGGAGAGAAACAAAGAGAGAGAAAGATAGTGACATTCTAGAGAG AGAAACTTCCGTTCCGGTCACCGGAAAACCTGTTCAGCTTCTTTCCACCACCGGTAACTAACGGTGGTTCCGCCGTCTGG TTCAATTCTCCGGCGAACTCCACCTCCAACTGCATTTGATTGTTCCTGTTTCCTGGATCGTGCCTTCAACAACACTCTTG GTGCTGTTTTCTTCAACTTTTTCTGCTTTGTTTCACTCTGAAGCTTCTCCAAGAAAAAGCAAACTCACTACCTTCCTTGG TTTCTAGGGTTTGGTGTGTTGTTACACTTTACCTTCCTCTGAGCATTTCTCGTTTTGCTCAATTTTGGTCCATTGATTTG TACTCAGCTCACTCACTCTTCAATTTCACATGGGTTGTGTCTAGAGTTTGGAGAATGCGAGCTTTATTCAACATGAGAGC TCTTCTTTTGTGCTTGTTGCCGCTGATTCTGACGGCGGCGGCGGTGGCGGTGGCGGCGGTAGCTGTGAGCCCGTCACTGA ACGACGACGTATTGGGGCTGATTGTGTTCAAAGCTGACATACGAGATCCGAAGGGGAAGCTGGTGTCATGGAACGAGGAT GATGAGAGTGCTTGTGGCGGTGGTTGGGTTGGGGTGAAATGTAACCCTAGATCCAACAGGGTGGTGGAGCTGAACCTTGA TGGGTTCTCTCTCTCTGGGAGAATTGGGAGAGGTTTGCAGCGTTTGCAGTTTCTGCGGAAGCTTTCTCTCAGGAACAATA ATCTCACTGGGAGCATAACCCCCAACATTGCTATTGTTGATAATCTTCGGGTTCTTGACTTGAGCAACAACAATCTCTCA GGGGAGGTGCCTGATGAGATTTTCCGACAATGTGGGTCTCTGAAGACTGTTTCCTTGGCGAGGAACAAGTTTTCTGGGAA CATTCCTTCCACTTTGGTCTCTTGTTCTTCTCTTGCTTCCATTGACCTGTCTCTTAACCAGTTTTCAGGTTCTGTTCCCT CTGGGGTTTGGGCGCTGAGTGGGCTCAGGGCTTTGGATTTGTCTGGTAACATGTTGGAGGAAGAGATTCCAAAAGGGGTT GAGGCGATGAAGAATTTGAGGAGCATAAGCTTGGCGAGGAATCAGTTATCTGGGAAGATTCCAGATGGGTTTGGAAGTTG TTTGCTCTTGAGGTCTGTTGATTTCAGTGAGAACGCTTTCTCCGGTGGCATTCCTGGCGATTTGAAGGGACTAGTGTTGT GTGGTTACTTTAGTTTGAGTGGTAATGCTTTCTCAGGAGAGGTTCCTGAGTGGATTGGAGAGATGAAGGGTCTTGAGACA TTGGACCTTTCCCGGAATAGATTTTCTGGTCAAGTGCCAAGCTCTGTAGGAAATCTTCAGTCACTGAAGGTTTTGAATTT TTCTTCCAATGGTTTCACTGGTAATCTGCCAGAGTCTATGGTGAATTGCACAAGCCTTTTGGCCTTGGATGTCAGTCAGA ATTCAATGTCTGGAGGCCTTCCATCGTGGATTTTCAAGTCGGATGTGGAGAAGGTTTTGGTATCGGAAAACAGACCCAGT GGTAGCCTGGAAACCCCTTTGTTTTCCCTGGCTGAAGTTGCGGTTCAGAGTCTTCAGGTTTTGGATTTATCTCACAACGC ATTTTCTGGTGAAATCACGTCTGCTATTGCAGGTTTAAGCAGCTTGCAACTTTTGAATTTATCAAGGAACTCTCTGAGAG GCCCTATACCAGCTGCAATTGGTGAACTGAAAACTTGTTCTAGTCTTGATTTGAGTTATAATAAGCTCAACGGAAGTATA CCTGTGGAAATAGGAGGAGCTATGTCCTTGAAAGAGTTGATATTGGAAAAGAACTTCCTAATTGGGAAGATTCCCACCTC GATTGAGAACTGCTCTTCGTTAACAACTTTGTAAGTTCTTTTTCCAGCCCATTTTTCATTTTAGCATTTTATACACATGC CTACAATACAGTAGGCAATTAAAGTTGCCTTTTGTAGTCAATTTTGTGCAAGTTTTCATCATATGGATTTAGCAAATCTG CATGCAATATATTTGGTTATAAAGTGCTTAACTTGCCTTCATTTACTTAGATAGTTATACCCATATAAACTGAAGTCAAG TCACCTTGTTTGTTCATGGTTGATATTCCCTTGATGGAGACTTTACCTTCTGTTTTCCCTTTTCATGTTCTATTAATACA AGTTGCGTATCATAATGCAATAAAAGATAATTGAGTGTCAACTTGATTCAGTCTGGTTTGCAGTTGTGTTGTTTTGCCAT AAACATGCACAATGCAATGCTTATGCCTGTTACTTCAACAGCAATAATTGTCTTAAGTTCAATGATACTTCTCACCTTTT ATGTACCCTACAATATTGAAAAAGCTAAAAGATTAAAGAAAAGATGTCCATAATACATACTGGGGATGGGATGGTTATGT TGACATGAACAACCTGGCAACCAAAGTTTTTTATTTCTCAGTACATAAAATGTTATCAACTTATCATGGTGTGGTTTTAA ACTTTATATCATTGTAGTTTCATGTATTGTTACTTTTTTCTTAATAGGGATGTTATGTTTTAGTCTCGACTCCTCTTATT TTTATGATGGCTCTGACTTCCCTGGTTATGCTTCTTTTTTTCCCCTTTCTGCTTTGGTTTATTCTGTAGGATTCTGTCGC AGAACAGGCTCAGCGGGTTGATACCAGCTGCGGTTGCAAAACTTACCAATCTACAAATCGTGGACTTATCATTTAACGAC CTTACTGGAAACCTTCCGAAGCAATTGGCCAACCTTCCCAACCTTCTTTCCTTCAATATATCTCACAACAACCTTCAGGG TGAATTGCCGGCTGGTGGTTTTTTCAACACCATTTTACCGTCTTCTGTTTCTGGCAATCCATCACTTTGTGGCTCTGCAG TGAACAAATCATGCCCTACTGTCCTCCCAAAGCCTATTGTTCTGAATCCCAACACTACTGACTCTGGCTCTGTACTGCCT GCAAATTTTGGTCACAAGAGAAATATTCTCAGCATTTCTGCACTCATTGCCATTGGTGCAGCTGCTTTCATTGTAATTGG TGTCATCGGCATAACTGTTCTTAACCTCCGTGTTCGGTCCTCCGCTTCTCGAACTCTTGCTGCCCATACATTTTCTGCAG GGGATGAATTCAGCCGTTCACCAACAACGGATGCCAACTCTGGCAAGCTTGTCATGTTTTCAGGTGAGCCTGATTTCAGC TCTGGGGCACATGCTTTACTTAACAAGAATTGTGAGCTTGGGCGCGGAGGGTTTGGGGCCGTGTACCAAACAGTTCTCGG AGATGGGCATTCAGTTGCTATAAAGAAACTCACCGTATCGAGCCTTGTCAAGTCTCAAGATGATTTTGAAAGGGAAGTGA AGAAATTAGGAAAAGTCAGACACCAAAATCTTGTGGAACTTGAAGGTTATTATTGGACTTCATCACTGCAGCTCCTCATA TACGAGTATGTCTCTGGTGGTAGTCTGCATAAGCATCTCCATGAAGGTTCAGGCGGAAACTTCCTCTCGTGGAATGAGAG GTTCAACGTGATTCTCGGGACAGCAAAGGGCTTAGCTCACTTGCACCACTCCAACATCATTCACTACAACATCAAGTCAA CCAATGTGCTAATTGATAGCTACGGTGAACCAAAAGTTGGCGATTATGGCCTAGCAAGGCTGCTGCCTATGCTCGATCGT TACGTCTTGAGCAGCAAAATTCAGAGTGCGCTTGGCTACATGGCACCAGAGTTTGCCTGCAAAACAGTGAAGATCACTGA GAAATGCGACGTTTATGGGTTTGGGGTATTGGTTCTGGAGATTGTTACAGGGAAGAGGCCTGTGGAGTACATGGAGGACG ATGTGGTGGTGCTGTGTGACATGGTGAGAGGCGCATTGGAAGAAGGGAGAGTGGATGAATGTATTGATGAGAAGCTCCAA GGGAAGTTCCCGGCGGAGGAAGCGATTCCGGTAATGAAGCTCGGGTTAATATGTACATCTCAAGTGCCATCTAACAGACC TGAAATGGGAGAGGTTGTTAACATATTGGAACTGATAAGATGCCCCTCAGAAGGAACTGAGGAGTTGGGATGAATGATAA TGATGAGTTAACTTGCCAATTTTCTTGACAATGGTGGTTTATCCGGCGAAGAAGAATCCGGTTTTGTTCATTACAGAGAG GAAAACAATATTATTATTTGTTAGAAAATGTTTCCTTTTTCATTGTAATATTTTGTATTTTTAGTCTGTAATCTGTACTC TGTAGTTGGATCTGAGATTTCCTCTGTTATGGCACACCTAGGATGCTGGATTCCTTTTCACCGGGTTCCGTTTTGGACCC CCCTTCTCTGTTATGGAAATTGTTGTTCAAATGCTGATATTTCATATTCAAGTTTGTTCTTTCTCGTGTCCCACTTCATT GTTTGGAACAGCTTTTTTTTTCTGTGTGTCTGGGAATGATGATCAGTTTGTTTATACGCTTTTTGTATGAGGCGCATGCA TTGTGCTGTCCTTTTATTTCTCTTATTTGTCTCTTGTCTGG
CDS sequence (LotjaGi1g1v0306600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGAGCTTTATTCAACATGAGAGCTCTTCTTTTGTGCTTGTTGCCGCTGATTCTGACGGCGGCGGCGGTGGCGGTGGC GGCGGTAGCTGTGAGCCCGTCACTGAACGACGACGTATTGGGGCTGATTGTGTTCAAAGCTGACATACGAGATCCGAAGG GGAAGCTGGTGTCATGGAACGAGGATGATGAGAGTGCTTGTGGCGGTGGTTGGGTTGGGGTGAAATGTAACCCTAGATCC AACAGGGTGGTGGAGCTGAACCTTGATGGGTTCTCTCTCTCTGGGAGAATTGGGAGAGGTTTGCAGCGTTTGCAGTTTCT GCGGAAGCTTTCTCTCAGGAACAATAATCTCACTGGGAGCATAACCCCCAACATTGCTATTGTTGATAATCTTCGGGTTC TTGACTTGAGCAACAACAATCTCTCAGGGGAGGTGCCTGATGAGATTTTCCGACAATGTGGGTCTCTGAAGACTGTTTCC TTGGCGAGGAACAAGTTTTCTGGGAACATTCCTTCCACTTTGGTCTCTTGTTCTTCTCTTGCTTCCATTGACCTGTCTCT TAACCAGTTTTCAGGTTCTGTTCCCTCTGGGGTTTGGGCGCTGAGTGGGCTCAGGGCTTTGGATTTGTCTGGTAACATGT TGGAGGAAGAGATTCCAAAAGGGGTTGAGGCGATGAAGAATTTGAGGAGCATAAGCTTGGCGAGGAATCAGTTATCTGGG AAGATTCCAGATGGGTTTGGAAGTTGTTTGCTCTTGAGGTCTGTTGATTTCAGTGAGAACGCTTTCTCCGGTGGCATTCC TGGCGATTTGAAGGGACTAGTGTTGTGTGGTTACTTTAGTTTGAGTGGTAATGCTTTCTCAGGAGAGGTTCCTGAGTGGA TTGGAGAGATGAAGGGTCTTGAGACATTGGACCTTTCCCGGAATAGATTTTCTGGTCAAGTGCCAAGCTCTGTAGGAAAT CTTCAGTCACTGAAGGTTTTGAATTTTTCTTCCAATGGTTTCACTGGTAATCTGCCAGAGTCTATGGTGAATTGCACAAG CCTTTTGGCCTTGGATGTCAGTCAGAATTCAATGTCTGGAGGCCTTCCATCGTGGATTTTCAAGTCGGATGTGGAGAAGG TTTTGGTATCGGAAAACAGACCCAGTGGTAGCCTGGAAACCCCTTTGTTTTCCCTGGCTGAAGTTGCGGTTCAGAGTCTT CAGGTTTTGGATTTATCTCACAACGCATTTTCTGGTGAAATCACGTCTGCTATTGCAGGTTTAAGCAGCTTGCAACTTTT GAATTTATCAAGGAACTCTCTGAGAGGCCCTATACCAGCTGCAATTGGTGAACTGAAAACTTGTTCTAGTCTTGATTTGA GTTATAATAAGCTCAACGGAAGTATACCTGTGGAAATAGGAGGAGCTATGTCCTTGAAAGAGTTGATATTGGAAAAGAAC TTCCTAATTGGGAAGATTCCCACCTCGATTGAGAACTGCTCTTCGTTAACAACTTTGATTCTGTCGCAGAACAGGCTCAG CGGGTTGATACCAGCTGCGGTTGCAAAACTTACCAATCTACAAATCGTGGACTTATCATTTAACGACCTTACTGGAAACC TTCCGAAGCAATTGGCCAACCTTCCCAACCTTCTTTCCTTCAATATATCTCACAACAACCTTCAGGGTGAATTGCCGGCT GGTGGTTTTTTCAACACCATTTTACCGTCTTCTGTTTCTGGCAATCCATCACTTTGTGGCTCTGCAGTGAACAAATCATG CCCTACTGTCCTCCCAAAGCCTATTGTTCTGAATCCCAACACTACTGACTCTGGCTCTGTACTGCCTGCAAATTTTGGTC ACAAGAGAAATATTCTCAGCATTTCTGCACTCATTGCCATTGGTGCAGCTGCTTTCATTGTAATTGGTGTCATCGGCATA ACTGTTCTTAACCTCCGTGTTCGGTCCTCCGCTTCTCGAACTCTTGCTGCCCATACATTTTCTGCAGGGGATGAATTCAG CCGTTCACCAACAACGGATGCCAACTCTGGCAAGCTTGTCATGTTTTCAGGTGAGCCTGATTTCAGCTCTGGGGCACATG CTTTACTTAACAAGAATTGTGAGCTTGGGCGCGGAGGGTTTGGGGCCGTGTACCAAACAGTTCTCGGAGATGGGCATTCA GTTGCTATAAAGAAACTCACCGTATCGAGCCTTGTCAAGTCTCAAGATGATTTTGAAAGGGAAGTGAAGAAATTAGGAAA AGTCAGACACCAAAATCTTGTGGAACTTGAAGGTTATTATTGGACTTCATCACTGCAGCTCCTCATATACGAGTATGTCT CTGGTGGTAGTCTGCATAAGCATCTCCATGAAGGTTCAGGCGGAAACTTCCTCTCGTGGAATGAGAGGTTCAACGTGATT CTCGGGACAGCAAAGGGCTTAGCTCACTTGCACCACTCCAACATCATTCACTACAACATCAAGTCAACCAATGTGCTAAT TGATAGCTACGGTGAACCAAAAGTTGGCGATTATGGCCTAGCAAGGCTGCTGCCTATGCTCGATCGTTACGTCTTGAGCA GCAAAATTCAGAGTGCGCTTGGCTACATGGCACCAGAGTTTGCCTGCAAAACAGTGAAGATCACTGAGAAATGCGACGTT TATGGGTTTGGGGTATTGGTTCTGGAGATTGTTACAGGGAAGAGGCCTGTGGAGTACATGGAGGACGATGTGGTGGTGCT GTGTGACATGGTGAGAGGCGCATTGGAAGAAGGGAGAGTGGATGAATGTATTGATGAGAAGCTCCAAGGGAAGTTCCCGG CGGAGGAAGCGATTCCGGTAATGAAGCTCGGGTTAATATGTACATCTCAAGTGCCATCTAACAGACCTGAAATGGGAGAG GTTGTTAACATATTGGAACTGATAAGATGCCCCTCAGAAGGAACTGAGGAGTTGGGATGA
Protein sequence (LotjaGi1g1v0306600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRALFNMRALLLCLLPLILTAAAVAVAAVAVSPSLNDDVLGLIVFKADIRDPKGKLVSWNEDDESACGGGWVGVKCNPRS NRVVELNLDGFSLSGRIGRGLQRLQFLRKLSLRNNNLTGSITPNIAIVDNLRVLDLSNNNLSGEVPDEIFRQCGSLKTVS LARNKFSGNIPSTLVSCSSLASIDLSLNQFSGSVPSGVWALSGLRALDLSGNMLEEEIPKGVEAMKNLRSISLARNQLSG KIPDGFGSCLLLRSVDFSENAFSGGIPGDLKGLVLCGYFSLSGNAFSGEVPEWIGEMKGLETLDLSRNRFSGQVPSSVGN LQSLKVLNFSSNGFTGNLPESMVNCTSLLALDVSQNSMSGGLPSWIFKSDVEKVLVSENRPSGSLETPLFSLAEVAVQSL QVLDLSHNAFSGEITSAIAGLSSLQLLNLSRNSLRGPIPAAIGELKTCSSLDLSYNKLNGSIPVEIGGAMSLKELILEKN FLIGKIPTSIENCSSLTTLILSQNRLSGLIPAAVAKLTNLQIVDLSFNDLTGNLPKQLANLPNLLSFNISHNNLQGELPA GGFFNTILPSSVSGNPSLCGSAVNKSCPTVLPKPIVLNPNTTDSGSVLPANFGHKRNILSISALIAIGAAAFIVIGVIGI TVLNLRVRSSASRTLAAHTFSAGDEFSRSPTTDANSGKLVMFSGEPDFSSGAHALLNKNCELGRGGFGAVYQTVLGDGHS VAIKKLTVSSLVKSQDDFEREVKKLGKVRHQNLVELEGYYWTSSLQLLIYEYVSGGSLHKHLHEGSGGNFLSWNERFNVI LGTAKGLAHLHHSNIIHYNIKSTNVLIDSYGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDV YGFGVLVLEIVTGKRPVEYMEDDVVVLCDMVRGALEEGRVDECIDEKLQGKFPAEEAIPVMKLGLICTSQVPSNRPEMGE VVNILELIRCPSEGTEELG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 27 | 27 | - | – | |
| Phobius | 9 | 19 | 11 | - | – | |
| TMHMM | 9 | 31 | 23 | - | – | |
| Phobius | 20 | 27 | 8 | - | – | |
| Phobius | 28 | 617 | 590 | - | – | |
| PANTHER | 29 | 965 | 937 | 0.0 | – | |
| PANTHER | 29 | 965 | 937 | 0.0 | – | |
| Gene3D | 35 | 316 | 282 | 5.8E-75 | ||
| Pfam | 36 | 77 | 42 | 2.6E-8 | ||
| SUPERFAMILY | 63 | 380 | 318 | 1.36E-56 | – | |
| ProSiteProfiles | 106 | 128 | 23 | 5.54 | ||
| SMART | 128 | 152 | 25 | 0.69 | ||
| ProSiteProfiles | 130 | 152 | 23 | 7.65 | ||
| Pfam | 130 | 147 | 18 | 0.29 | ||
| PRINTS | 131 | 144 | 14 | 2.2E-5 | – | |
| Pfam | 155 | 214 | 60 | 3.6E-7 | ||
| SMART | 201 | 224 | 24 | 43.0 | ||
| ProSiteProfiles | 203 | 225 | 23 | 5.587 | ||
| SMART | 225 | 249 | 25 | 41.0 | ||
| ProSiteProfiles | 227 | 249 | 23 | 5.51 | ||
| SUPERFAMILY | 277 | 578 | 302 | 1.96E-54 | – | |
| SMART | 297 | 321 | 25 | 46.0 | ||
| ProSiteProfiles | 299 | 321 | 23 | 5.471 | ||
| Pfam | 299 | 357 | 59 | 1.2E-7 | ||
| Gene3D | 317 | 591 | 275 | 2.0E-74 | ||
| ProSiteProfiles | 323 | 345 | 23 | 4.955 | ||
| SMART | 397 | 420 | 24 | 340.0 | ||
| Pfam | 399 | 458 | 60 | 2.2E-8 | ||
| ProSiteProfiles | 399 | 425 | 27 | 5.794 | ||
| SMART | 421 | 445 | 25 | 28.0 | ||
| PRINTS | 421 | 434 | 14 | 2.2E-5 | – | |
| ProSiteProfiles | 471 | 493 | 23 | 5.017 | ||
| Pfam | 471 | 530 | 60 | 3.1E-8 | ||
| SMART | 493 | 516 | 24 | 190.0 | ||
| ProSiteProfiles | 495 | 516 | 22 | 6.056 | ||
| SMART | 517 | 540 | 24 | 120.0 | ||
| ProSiteProfiles | 519 | 542 | 24 | 5.802 | ||
| SMART | 541 | 565 | 25 | 35.0 | ||
| ProSiteProfiles | 543 | 565 | 23 | 4.786 | ||
| Phobius | 618 | 643 | 26 | - | – | |
| TMHMM | 621 | 643 | 23 | - | – | |
| Phobius | 644 | 979 | 336 | - | – | |
| ProSiteProfiles | 696 | 968 | 273 | 34.407 | ||
| Pfam | 698 | 965 | 268 | 2.3E-41 | ||
| SUPERFAMILY | 700 | 969 | 270 | 9.98E-65 | ||
| ProSitePatterns | 702 | 725 | 24 | - | ||
| Gene3D | 702 | 773 | 72 | 8.7E-20 | – | |
| CDD | 702 | 968 | 267 | 6.17872E-86 | – | |
| Gene3D | 774 | 976 | 203 | 5.5E-51 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0306600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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