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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0446600 |
| Transcript ID | LotjaGi1g1v0446600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G67510.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9ZU46|ZAR1_ARATH Receptor protein kinase-like protein ZAR1; TrEMBL-Plants: tr|G7KTA0|G7KTA0_MEDTR Receptor-like kinase; Found in the gene: LotjaGi1g1v0446600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:94546660..94551976) extracted from Lotus japonicus Gifu genome v1.2.
CATAATTTAAAAACAGATAATTTCCAGGTGGATTAGAAACCTAACTTTGTCTTTACACTATTTGAAAGTCCACTAAAAGA GAAACATCAACCCCTACGAAACAAACCACAGTTGAGTTCAGTTAAGCACTATTATCAAACATTATTTCAATATTGGAATA GAAACCCAACAGAATCCTAAATCCATTGATCCCATCTTAAGTTGCACCCAAAGAGAGAAAGATCCTTTTGTTTCTCTGTC TCAATTACCTCTTGCTTCTCTTTCACTTCACTTCACTTCACTCTACTCCTTCTGTTAACTAACAACTCTCTCTCAAACTC TATAGATCTTTTTGGCGGGAATTGGACCCCACAAAATTAAAATCTCATCCTCCCCAACTCTTAGATATCTTTTCTTCCAT AAATACAACAACTTCCCCTCTTTCTTAATAATCCTCCTCAACCATTTCCATTCCAACCTCTTTTTCCATTCTCTCCCACA ACTGCACCAAACGCACCGTACCATCCATAACAACAAACCACCCAAAACGGTGCCGTATTTCTAATCCTAAATGCACTTCA CTCTCTTCATCCTCCTTTTCTTCTTCCACTTCCACCGGACTGTTTCACTTACCTCCGACGGCCTCGCCCTTCTCACTCTA AAATCCGCCGTCGACGGCGTCAGCGCCGCCGCATTCTCCGACTGGAACGATGCCGACGCAAATCCCTGCCGGTGGTCCGG CATCAGCTGCGGCAACATCTCCGGTGACTCTGACCCCCGCGTCGTCGGCGTCGCCCTCGCCGGCAAGGGCCTCCGCGGCT ATCTCCCGTCGGAGCTTGGCAACCTCCTCTACCTCCGCCGCCTGAGCCTCCACACCAACGCCTTCCACGGCTCCATCCCC TCCCAGCTCTTCAACGCCGCCGCGCTCCACAGCGTCTTCCTCCACGGTAACAACCTCTCCGGCGAACTTCCACCTTCCGT CTTCGACCTCCCTCACCTCCAGAATCTTGACCTCTCCGACAACTCCCTCTCTGGCAACATCCCAAACTCCCTCTCCAACT GCTCCCAGCTCCAGCGGCTCGTCCTCGCCCGCAACAAATTCTCCGGTGAGATCCCGGCGACTCCCTGGCCGGCGCTGAAG ATCCTCGTCCAGCTCGACCTCTCCGGGAACCATCTCAAAGGTCCGATCCCGGACCAAATCGGTGACCTCACCTCCCTCGC CGGAACCCTAAACCTCTCCTTCAACCACCTAACCGGTAAACTCCCAAATTCCCTCGGGAAATTGCCTGTATCCGTGAGCT TCGATCTTCGCAACAACGACCTCGCCGGCGAGATCCCTCAAACGGGGTCGTTTTCGAATCAGGGACCCACCGCATTCCTC AACAACCCGAACCTCTGCGGGTTCCCTCTGCAGAAACCCTGCAGCGGTTCAGCGCCGAGCGAACCGGGCGCGAATCCCGG TGCGTCTCGGCCAACCGGGAAGCGGTCCAGCAAGGGATTGAGCCCTGGCTTGATTATTCTGATTACAGTTGCTGATGCTG CTGTTGTGGCTTTGATTGGGCTTGTAGTGGTTTATATTTATTGGAAGAAGAAGGACAAGTCCAATGGGTGTAGTTGCACT GGAAAAAGCAAGTTTGGTAGTAGTGGTAATGGGGAAGATGAGAAATCAAGGTTGTGTTGTTTTTGTGGGTCTTTGAATGG GTTCAGGAGTGATGATTCTGAAATGGAGGAGGGTGAGAAAGGGGGAGAGGATGAGAGAGTTGAAGGGGAGGGGGGGCATT TGGTGGCAATTGATAAGGGCTTCAACTTTGAGCTTGATGAGCTTTTAAGAGCTTCTGCTTATGTGTTGGGGAAGAGTGGG TTGGGGATTGTGTATAAAGTTGTGCTAGGGAATGGGGTGCCTGTGGCTGTGAGGAGATTAGGGGAGGGTGGGGAACAGAG GTATAAGGAGTTTGCTGCTGAGGTTCAAGCTATTGGGAAAGTGAAACACCCTAACATTGTTAAGTTGAGAGCTTATTATT GGGCTCCTGATGAGAAGCTTTTGATCAGTGATTTCATCTCGAATGGCAATTTGGCCACTGCCCTTAGAGGTCAGTTCTTT CACATTTTGATCCTGTGTTCCTTCCTTCTTTTGGTCAGTGATTTCATTTGTTGCATTTAGTGATAAGTAGTAACCTCTAT TTCTACCCTTACTATACATATTAGAGTAGCAGGCTTGGGGGGTAAGGGTGTACACAAACAGAGTGATGACAATTTCCACC AAAAATTTAGTGATGATTAGTAATGAGAGTTGAATAGGAGTGATTGCAAAATATTAATCATGACAGCTAATGTTAACAGG AAATAACGTGCATCTCTGGTTATATAAATAGAAACATTTTAGGAGGATGTTATCAATTAGTACAAGAAGAAAATTGTCTA GAGTAGTTCTTCTGTCTGATTTTATGTTTTGTTTGTTTGATAATTTGATTGGTTCTTGTCCTTTTTACTTTTATAATTCA GCCCAGAAAACGAAAACAATTGTTGTGCTATCTAGAAAGGATGGGTTACCAGTTATACTAAATTTAATATTCATTTTAAA ATAGTTGATAGCAAAAATTGGTTTTGTAGTCCTGTCTTTTTCAATTGTTTCTATTTTTGAATATGATTGTCGTTTCCGTT ATTGATTTGTGGGACAATGGGACCGCCAACATGGTTGGTTAAATGGCGTAAATGTGCAATATTCAATGGAGTATGTTTTT AAAATTAATTTGAGGGTTGAGTGTTGCTTGCTAGGTGAGCACTTATTAGCTGCTTATTTATTATTGGTAAAAGCATTGGA TCAAGAAAATGTTTGGTGAGACAACAATGCTAATATAAATGAGCGTCCTTTGGGTACTTCAGACGAGAAAAACAGGACAT TCACCATGTGTGTGGGAAACGAGATGGCAGTGGTTCTCATGTTTGGGACCATGATCTTCTAGATCTCTCATTCTCAGCAC ATGGGGTCACTAACCAAACCTAAATTTTAGGTGGAAATATTGCAGTTTCACACATCATTGTAGTGTCCGTTTGACTTTTA TAAATGTACTCCATGTATTTTTTAATAAGGGCAAAGGACAAACATCATGCTATAGAGTTCCCGCAATGCGCATGAGATCT AAGGAGGGGCCGGACCACTTTATGGATCTAATGTAGGTAGCTTTACCTTGCATTTTTGCAAGAGACTGATTTTATGTCTC GAATATGTGACTGCAAAGTCATATGGCAGCAACCTTATCGTTGTGCCGAGACTTTTCCTCATGTATTTTATGTAAGAGTG AAAATCTTAGATGAAAATGTGAATATATTTTTAAGAGATAATGTTTTTTTATATCATTGTATGGTTAAAATTTCTCATTA CTCAGCCTGTATTCATCCTCTATAGTATATTAGAAGTTGTTTTGGATATCCTCCTTTATATGTGTATTTTCAGGTCACTA TAATGGTATCTTTTAAAGTAGCTTTGTATAAAGTGTGTTGTGTTTGTAGGCTAAAAAACAGCTTTCAAGTTTGAGCCGCT TTTGTGACTTTATTTCTTTCAGCTAAAGCTAAAAACTTCCTGGTTTTTGTTATTTTTAGTTGAACTTCCTACTTCTTAAA CTGCTGGTGAAAAAAATTGCTTTTCCCTTTTCCATTATTTATCCTTTTCGCTAAACTTTCTTGCTTCTGAAGCAGTACCA GCTCCACAATCTCTTGATCAAGCCTGGGCCCTACTATAACTGTTTTCCTACCTTCCTTGCTTCTCTTGCTTTTATGTTTG ACTATTGTGATGTGTTAATGTGGGATTATTATAATTTTGTATTTGAAATTATTTATATAATATTTTAAATTGTTATATTT GGCTTTATTAATTTCAAGGACATATCATATATCATCAAATTGTATAATTTTGTTTGTGTAAAGTATGAAGTGCATAAATC TGTAATTGCAAGTAAAGCAACTCAATCATATAAATTTATTTGATGTGAGGGTTGTGACGGTGGATGACCTGTAAGTACCT CTATAAGTGACCTATGATCCCGGAGGCATGCCCCTGGCCCGCGGTGGTGGCCAGAGGTGAAACCCGGCAAACTTATTCTA TTCATCAAAAAAAGGTTGCATAGTTCATATTTAATCCCAATCGCTTATGCAGGGAGAAATGGCCAACCATCTCCAAATCT TTCATGGTCAACCAGGCTGAGAATAGCCAAAGGAACAGCAAGGGGTTTGGCATACCTCCATGAATGCAGTCCAAGAAAAT TTGTTCATGGCGACATCAAACCCTCCAATATCCTGCTTGACACAGACTTCCAACCCCATCTTTCCGATTTCGGTCTCAAC CGGCTGATCAGCATCACCGGAAATAACCCCTCCTCAGGCGGCTTCATGGGCGCAGCTCTTCCTTACATAAAGTCCTCACA AACAGAGCGAACTAACAACTACAAAGCCCCTGAAGCTCGAGTCCCGGGCTGCAGACCCACCCAGAAATGGGATGTGTATT CATTTGGAGTTGTATTGCTCGAATTGCTCACTGGGAAGTCCCCGGATTCTTCTCCCGCAGCATCGACTTCCATGGAAGTC CCTGACTTGGTGAGGTGGGTAAGGAAAGGGTTTGAGCTAGAAAGCCCTTTGTCTGAAATGGTTGATCCATCGCTTCTCCA AGAAGTTCATGCCAAGAAAGAGGTACTAGCTGTGTTTCACGTAGCAATGTCATGCACAGAAGGAGACCCTGAGGTTCGTC CTAAAATGAAAGCTGTCTCTGAAAATCTTGAAAGAATTTGAACATGGTATTCTAATTTATACCAGCTGATCAAGGAATAA GCCTGAGGCTGGAATTTCTGTGATGCACGCAATGAAAGATGCATCTCAGTCCCATGATGCATTTCTGTGGTAGCATTCAG AAGATTTTCTTGTAGGGGTATCAAGGTGGTGTTGCAAATATTTCCTTCCATCTTGGACTAGGCCCTTAACTTCTGATTTG AAGTCAAAGCAATTTTTTGACAGCCGTTCTCACCTCAATTTTATACTCTTGGGTAAAGATGAAGAAAGTTAATGTTACAT TTTGTTCTGATCTCATCATCCCACAAAATCTTATTACAATAATTTGATTAATTTCACATTATCTTGTGCTATTACTTGGG TTGGCAAATCCAGATGTAATCTAGTGTATATTTTTTTATTTTTTTATTTCACTTTATTATGAATGGCAAGTTGGCAACTC ATTGACTATTGAGCCAGAAAAGGAACATGTTACTTGTATTAATGGGGTCTCTGGATGATTTTTGTAGGGGTTGTTTAAAT CACCACCCCTATCTCAAACCCCACCACCCGATCAGAG
CDS sequence (LotjaGi1g1v0446600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCACTTCACTCTCTTCATCCTCCTTTTCTTCTTCCACTTCCACCGGACTGTTTCACTTACCTCCGACGGCCTCGCCCT TCTCACTCTAAAATCCGCCGTCGACGGCGTCAGCGCCGCCGCATTCTCCGACTGGAACGATGCCGACGCAAATCCCTGCC GGTGGTCCGGCATCAGCTGCGGCAACATCTCCGGTGACTCTGACCCCCGCGTCGTCGGCGTCGCCCTCGCCGGCAAGGGC CTCCGCGGCTATCTCCCGTCGGAGCTTGGCAACCTCCTCTACCTCCGCCGCCTGAGCCTCCACACCAACGCCTTCCACGG CTCCATCCCCTCCCAGCTCTTCAACGCCGCCGCGCTCCACAGCGTCTTCCTCCACGGTAACAACCTCTCCGGCGAACTTC CACCTTCCGTCTTCGACCTCCCTCACCTCCAGAATCTTGACCTCTCCGACAACTCCCTCTCTGGCAACATCCCAAACTCC CTCTCCAACTGCTCCCAGCTCCAGCGGCTCGTCCTCGCCCGCAACAAATTCTCCGGTGAGATCCCGGCGACTCCCTGGCC GGCGCTGAAGATCCTCGTCCAGCTCGACCTCTCCGGGAACCATCTCAAAGGTCCGATCCCGGACCAAATCGGTGACCTCA CCTCCCTCGCCGGAACCCTAAACCTCTCCTTCAACCACCTAACCGGTAAACTCCCAAATTCCCTCGGGAAATTGCCTGTA TCCGTGAGCTTCGATCTTCGCAACAACGACCTCGCCGGCGAGATCCCTCAAACGGGGTCGTTTTCGAATCAGGGACCCAC CGCATTCCTCAACAACCCGAACCTCTGCGGGTTCCCTCTGCAGAAACCCTGCAGCGGTTCAGCGCCGAGCGAACCGGGCG CGAATCCCGGTGCGTCTCGGCCAACCGGGAAGCGGTCCAGCAAGGGATTGAGCCCTGGCTTGATTATTCTGATTACAGTT GCTGATGCTGCTGTTGTGGCTTTGATTGGGCTTGTAGTGGTTTATATTTATTGGAAGAAGAAGGACAAGTCCAATGGGTG TAGTTGCACTGGAAAAAGCAAGTTTGGTAGTAGTGGTAATGGGGAAGATGAGAAATCAAGGTTGTGTTGTTTTTGTGGGT CTTTGAATGGGTTCAGGAGTGATGATTCTGAAATGGAGGAGGGTGAGAAAGGGGGAGAGGATGAGAGAGTTGAAGGGGAG GGGGGGCATTTGGTGGCAATTGATAAGGGCTTCAACTTTGAGCTTGATGAGCTTTTAAGAGCTTCTGCTTATGTGTTGGG GAAGAGTGGGTTGGGGATTGTGTATAAAGTTGTGCTAGGGAATGGGGTGCCTGTGGCTGTGAGGAGATTAGGGGAGGGTG GGGAACAGAGGTATAAGGAGTTTGCTGCTGAGGTTCAAGCTATTGGGAAAGTGAAACACCCTAACATTGTTAAGTTGAGA GCTTATTATTGGGCTCCTGATGAGAAGCTTTTGATCAGTGATTTCATCTCGAATGGCAATTTGGCCACTGCCCTTAGAGG GAGAAATGGCCAACCATCTCCAAATCTTTCATGGTCAACCAGGCTGAGAATAGCCAAAGGAACAGCAAGGGGTTTGGCAT ACCTCCATGAATGCAGTCCAAGAAAATTTGTTCATGGCGACATCAAACCCTCCAATATCCTGCTTGACACAGACTTCCAA CCCCATCTTTCCGATTTCGGTCTCAACCGGCTGATCAGCATCACCGGAAATAACCCCTCCTCAGGCGGCTTCATGGGCGC AGCTCTTCCTTACATAAAGTCCTCACAAACAGAGCGAACTAACAACTACAAAGCCCCTGAAGCTCGAGTCCCGGGCTGCA GACCCACCCAGAAATGGGATGTGTATTCATTTGGAGTTGTATTGCTCGAATTGCTCACTGGGAAGTCCCCGGATTCTTCT CCCGCAGCATCGACTTCCATGGAAGTCCCTGACTTGGTGAGGTGGGTAAGGAAAGGGTTTGAGCTAGAAAGCCCTTTGTC TGAAATGGTTGATCCATCGCTTCTCCAAGAAGTTCATGCCAAGAAAGAGGTACTAGCTGTGTTTCACGTAGCAATGTCAT GCACAGAAGGAGACCCTGAGGTTCGTCCTAAAATGAAAGCTGTCTCTGAAAATCTTGAAAGAATTTGA
Protein sequence (LotjaGi1g1v0446600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHFTLFILLFFFHFHRTVSLTSDGLALLTLKSAVDGVSAAAFSDWNDADANPCRWSGISCGNISGDSDPRVVGVALAGKG LRGYLPSELGNLLYLRRLSLHTNAFHGSIPSQLFNAAALHSVFLHGNNLSGELPPSVFDLPHLQNLDLSDNSLSGNIPNS LSNCSQLQRLVLARNKFSGEIPATPWPALKILVQLDLSGNHLKGPIPDQIGDLTSLAGTLNLSFNHLTGKLPNSLGKLPV SVSFDLRNNDLAGEIPQTGSFSNQGPTAFLNNPNLCGFPLQKPCSGSAPSEPGANPGASRPTGKRSSKGLSPGLIILITV ADAAVVALIGLVVVYIYWKKKDKSNGCSCTGKSKFGSSGNGEDEKSRLCCFCGSLNGFRSDDSEMEEGEKGGEDERVEGE GGHLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVKLR AYYWAPDEKLLISDFISNGNLATALRGRNGQPSPNLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDTDFQ PHLSDFGLNRLISITGNNPSSGGFMGAALPYIKSSQTERTNNYKAPEARVPGCRPTQKWDVYSFGVVLLELLTGKSPDSS PAASTSMEVPDLVRWVRKGFELESPLSEMVDPSLLQEVHAKKEVLAVFHVAMSCTEGDPEVRPKMKAVSENLERI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 2 | 2 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 3 | 715 | 713 | 0.0 | – | |
| Phobius | 3 | 14 | 12 | - | – | |
| PANTHER | 3 | 715 | 713 | 0.0 | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| Gene3D | 16 | 185 | 170 | 3.6E-45 | ||
| Phobius | 20 | 313 | 294 | - | – | |
| SUPERFAMILY | 22 | 281 | 260 | 2.15E-47 | – | |
| Pfam | 22 | 60 | 39 | 2.0E-9 | ||
| Pfam | 119 | 177 | 59 | 1.0E-7 | ||
| ProSiteProfiles | 142 | 164 | 23 | 7.104 | ||
| Gene3D | 186 | 291 | 106 | 6.1E-23 | ||
| ProSiteProfiles | 191 | 213 | 23 | 5.117 | ||
| ProSiteProfiles | 215 | 239 | 25 | 5.148 | ||
| Pfam | 219 | 238 | 20 | 0.51 | ||
| MobiDBLite | 286 | 307 | 22 | - | – | |
| Pfam | 306 | 340 | 35 | 4.6E-5 | ||
| TMHMM | 314 | 336 | 23 | - | – | |
| Phobius | 314 | 338 | 25 | - | – | |
| Phobius | 339 | 715 | 377 | - | – | |
| ProSiteProfiles | 420 | 715 | 296 | 32.64 | ||
| SMART | 424 | 715 | 292 | 2.9E-12 | ||
| SUPERFAMILY | 425 | 712 | 288 | 4.32E-59 | ||
| Pfam | 425 | 648 | 224 | 1.6E-32 | ||
| Gene3D | 426 | 496 | 71 | 3.4E-17 | – | |
| CDD | 426 | 715 | 290 | 7.24735E-93 | – | |
| Gene3D | 497 | 715 | 219 | 7.0E-50 | – | |
| ProSitePatterns | 543 | 555 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0446600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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