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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0512900 |
| Transcript ID | LotjaGi1g1v0512900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor protein kinase, putative; TAIR: AT3G02130.1 receptor-like protein kinase 2; Swiss-Prot: sp|Q9S7I6|RPK2_ARATH LRR receptor-like serine/threonine-protein kinase RPK2; TrEMBL-Plants: tr|G5EM40|G5EM40_LOTJA Leucine-rich repeat receptor-like kinase; Found in the gene: LotjaGi1g1v0512900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:103489192..103493501) extracted from Lotus japonicus Gifu genome v1.2.
AAAAATAAAATCCTTATTTTCCATAGCATTGATTGACTAGCATTTAAAACATGAAAAAGAAAAAAGAAAAAGAAAAGAAG AAGAAAAACGCGTATTCTGAAAAAGAAACCAGACAGTTGAATCTTCTCTCTCCTCCTCTTCCTCATCATCATCATCACTG TTCTCTTCTCTCTTCTCAATCTCTCAATCCCAATCTCTCAAAATTAGGGCTAGGGTTTTCAGAAAACCCTTTTTCTTTTG CCTTCTGCAACTGAAACAACGTTAACAATCTCTCTGAGATGTTTTCATCTTCAACTACTTCTACAACCAAATGGAGGAGG TTCTTTCAACTCTGCACTCTCTTCTGGGTCCTCTTCTTCTCCGGCAACAACCACGCTGTTTCCGCCGTCGATTCCGATGA TGGGTCGGTGTTGTTTCAGCTCAGGAATTCACTCTCTGACCCTGAAGGCTTGCTCTCCAGCTGGGACCCCACCAAGGGTT TGAGCCACTGTGCATGGTTTGGTGTCTCCTGCGACCCGAGCTCGCACCGTGTTGTGGCGATCAACGTCACGGGTAACGGA GGTAACCGAAAACACCCTTCTCCGTGTTCTGATTTTACTGAATTTCCCCTATACGGTTTTGGAATTAGGAGGAGCTGTGT GGGTAGTGGAGGGGCTTTGTTTGGGAAGGTTTCACCTTTGTTCAGTAAGCTCACTGAGCTTAGGATTCTGTCGCTTCCCT TTAACGGGTTTGAGGGTGTGATTCCTGATGAAATTTGGGGGATGAACAAGTTGGAGGTTATTGATCTTGAGGGGAACTTG ATAAGTGGGTATCTTCCTTCAAGGTTTAGTGGGTTGAGGAGTTTGAGGGTTCTTAATCTTGGGTTTAATAGGATTGTTGG GGAGGTGCCAAATTCATTGTCAAGTGTTGCTAGTTTGGAGATTTTGAATTTGGCTGGGAATGGCATTAATGGGTCTGTTC CTGGTTTTGTTGGGAGGCTCAGAGGGGTGTATCTTTCTTTCAACTTGCTTACCGGGAGTATTCCGCAAGAGATAGGGGAT GACTGTGGTAGGCTGGAGCATCTGGATTTGTCTGGTAATTTCTTGACTCTGGAGATACCGAATAGTTTGGGGAATTGTAG TCAGTTGAGGACTATTTCACTGCATTCAAATATATTGCAGGATGTTATTCCAGCTGAACTTGGTAAGCTTAGGAAGCTTG AGGTGTTGGATGTTTCAAGGAATACTCTTGGCGGTTTGGTGCCTCCTGAGCTTGGGCATTGTATGGAGTTATCTGTCCTT GTTCTTTCTAATCTTTTTAATCCGCTTCCAGATGTCAGTGGTATGGCAAGGGACTCTTTGACAGATCAGCTAGTTTCTGT TATTGATGAGTATAATTATTTTGAAGGTCCAATTCCGGTGGAAATTATGAACCTTCCTAAGTTGAAGATACTGTGGGCGC CTAGGGCAAATCTGGAAGACAGTTTTCCGCGCAGTTGGAATGCTTGTGGTAACTTGGAGATGCTCAATTTGGCTCAAAAT GATTTCACTGGGGATTTTCCTAATCAACTTAGTCGCTGCAAGAAGCTCCATTTTCTTGATTTAAGCTTTACCAACCTTAC CGGCAAGCTTGCTAAAGACCTTCCTGCTCCATGCATGACAGTCTTTGACGTCAGTGGAAATGTCTTATCCGGATCAATTC CTGAATTCTCTGGTAACGCATGTCCCTCAGCTCCTTCCTGGAATGGGAATCTATTTGAATCCGACAACAGGGCCCTTCCG TACGGATTCTTTTTTGCATTAAAGGTTCTTCAAAGGTCCCCTTTGTCGTCACTTGGAGATGTTGGCCGTTCTGTTATTCA CAACTTTGGTCAAAACAATTTTATTAGCATGGATTCATTGCCAATAGCGCGTTACAGATTAGGAAAGGGATTTGCTTACG CAATTCTTGTTGGAGAAAACAACCTGACAGGACCGTTTCCTACTAATTTATTTGAGAAATGTGATGGATTAAATGCATTA CTTTTAAATGTGAGTTATACTCGGATATCTGGTCAGATTTCTTCCAACTTTGGCAGAATGTGCAAATCATTAAAATTCTT GGATGCATCTGGAAATCAGATTACTGGCACGATCCCCTTTGATTTAGGGGACATGGTATCTCTTGTTGCTCTGAATCTTA GTCGGAACCATTTACAAGGTCAGATTCCCACCAGCCTTGGTCAGTTAAACGATCTGAAGTTTCTCTCCTTGGGCAATAAT AACTTCAGTGGCTCCATTCCTACTAGCCTTGATCAGCTGCACTCCTTAGAAGTCTTGGATCTCTCTTCAAATTCTTTTAC TGGTGAAATTCCAAAAGGTATTGAGAACTTGAGAAATCTGACTGTTGTTTTGCTCAACAATAACAAACTTTCTGGACAGA TTCCTGCTGGTTTGGCAAATGTCAGTACACTGTCAGCATTCAACGTCTCATTCAATAACTTGTCTGGGTCCTTGCCATCA AATAGCAGCTTGATAAAATGCAGCAGTGCTGTTGGGAATCCATTTTTGCGCTCTTGCATTGGAGTTTCTCTTACTGTGCC ATCAGCAGATCAACACGGGGTGGCTGATTATCCTAATTCTTATACTGCTGCACCACCAGAAGATACAGGCAAAACAAGTG GGAATGGATTCACTTCTATTGAAATAGCATGTATAACTTCTGCATCTGCCATTGTTTCTGTTCTTCTAGCCCTAATTGTC CTTTTTGTTTGTACGCGGAAGTGGAATCCAAGGTCCAGGGTTGTTGGGTCTACAAGAAAAGAAGTCACAGTGTTCACTGA CGTTGGGTTTCCATTGACATTTGAAAGCGTTGTCCGGGCCACTGGAAATTTCAATGCAGGCAACTGCATTGGGAATGGGG GATTTGGGGCAACCTATAAGGCAGAGATATCACCAGGAAACTTAGTTGCAATAAAACGTCTCTCGGTGGGGAGATTTCAA GGTGCTCAACAATTCCATGCCGAGATTAAGACCCTTGGAAGGCTTCATCATCCAAATCTTGTCACCCTTATTGGTTATCA TGCTAGTGATTCGGAGATGTTTCTCATATACAACTATTTGTCAGGTGGTAATCTGGAAAAGTTTATCCAGGAGAGGTCCA CAAGGGCTGTGGATTGGAGAATTCTTCACAAGATTGCATTGGATATAGCCCGTGCACTTGCATACCTGCATGATCAGTGC GTACCGCGAGTCCTCCATCGAGATGTCAAGCCCAGTAATATCTTGTTGGATGATGATTATAATGCTTATCTATCTGACTT TGGATTGGCTAGGCTTCTCGGAACTTCAGAAACTCATGCCACCACCGGTGTAGCGGGAACATTCGGTTATGTTGCTCCTG AATACGCCATGACTTGCCGCGTTTCTGACAAGGCTGATGTGTATAGCTATGGTGTGGTGCTTCTGGAGTTACTCTCAGAC AAGAAGGCGTTGGATCCTTCATTTTCTTCATATGGGAATGGTTTCAACATTGTAGCGTGGGCATGCATGCTACTCCGGCA AGGCCAGGCAAAAGATTTCTTCACTGCTGGCTTATGGGATGCTGCACCTGCAGATGATTTGGTTGAGGTCCTGCACTTGG CTGTTGTTTGTACAGTTGAGACCCTCTCCACCCGACCGACCATGAAACAGGTTGTGCGGCGGCTGAAGCAACTTCAGCCA CCATCGTGTTAATTTGCCATGGTGAGGCTGGCTGTGCTTGTTTGACATAGTAATCTTAGACATATTGTAATTTGTGATGC AGATATTTGATCTCCAATGCCATACTTGTCTATTCCAGTTTCATTTGTCAAATAAAATTATATAACCATAGATCAGAACC AGTTTCTTGAAATTTTTGGTCAGTTTTTATGATTTTGTGAATTTTTAGTAGCATCACTTGCAATTATAGGAACTTTCTAG TTTCAGTTGTCAAACAAAATCATAGAATAGAATCAGCTTCTTGAATTGTAGCCAGTTTTTCTAATGTTTTGATTTTTAGT GGCATCACTTACAATTATAGAAACTTGTAATGTTTTGATATTTTTTTCCTTGTTGTTTAAGTGTTCACATTCAATTATGG TGTGCCACCCATCAGTTGACAACTCAGTACAAAACTACAAAACTTCAAAACTTCGAAGTATTCTCTCCACCACATGTGAA GTTCTCGTTACTCAAACTTTCATTTTGATTTTCTCTCTGAAATATTATAATTAGTTTATGTTCTCTCCAAAATTCTATAA TCCAAGTAATCCGAGTGTTTGGGTTAACCTCCAAAACTAACCAACCACCAACCAAAGTATTAGAGTGACG
CDS sequence (LotjaGi1g1v0512900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTTCATCTTCAACTACTTCTACAACCAAATGGAGGAGGTTCTTTCAACTCTGCACTCTCTTCTGGGTCCTCTTCTT CTCCGGCAACAACCACGCTGTTTCCGCCGTCGATTCCGATGATGGGTCGGTGTTGTTTCAGCTCAGGAATTCACTCTCTG ACCCTGAAGGCTTGCTCTCCAGCTGGGACCCCACCAAGGGTTTGAGCCACTGTGCATGGTTTGGTGTCTCCTGCGACCCG AGCTCGCACCGTGTTGTGGCGATCAACGTCACGGGTAACGGAGGTAACCGAAAACACCCTTCTCCGTGTTCTGATTTTAC TGAATTTCCCCTATACGGTTTTGGAATTAGGAGGAGCTGTGTGGGTAGTGGAGGGGCTTTGTTTGGGAAGGTTTCACCTT TGTTCAGTAAGCTCACTGAGCTTAGGATTCTGTCGCTTCCCTTTAACGGGTTTGAGGGTGTGATTCCTGATGAAATTTGG GGGATGAACAAGTTGGAGGTTATTGATCTTGAGGGGAACTTGATAAGTGGGTATCTTCCTTCAAGGTTTAGTGGGTTGAG GAGTTTGAGGGTTCTTAATCTTGGGTTTAATAGGATTGTTGGGGAGGTGCCAAATTCATTGTCAAGTGTTGCTAGTTTGG AGATTTTGAATTTGGCTGGGAATGGCATTAATGGGTCTGTTCCTGGTTTTGTTGGGAGGCTCAGAGGGGTGTATCTTTCT TTCAACTTGCTTACCGGGAGTATTCCGCAAGAGATAGGGGATGACTGTGGTAGGCTGGAGCATCTGGATTTGTCTGGTAA TTTCTTGACTCTGGAGATACCGAATAGTTTGGGGAATTGTAGTCAGTTGAGGACTATTTCACTGCATTCAAATATATTGC AGGATGTTATTCCAGCTGAACTTGGTAAGCTTAGGAAGCTTGAGGTGTTGGATGTTTCAAGGAATACTCTTGGCGGTTTG GTGCCTCCTGAGCTTGGGCATTGTATGGAGTTATCTGTCCTTGTTCTTTCTAATCTTTTTAATCCGCTTCCAGATGTCAG TGGTATGGCAAGGGACTCTTTGACAGATCAGCTAGTTTCTGTTATTGATGAGTATAATTATTTTGAAGGTCCAATTCCGG TGGAAATTATGAACCTTCCTAAGTTGAAGATACTGTGGGCGCCTAGGGCAAATCTGGAAGACAGTTTTCCGCGCAGTTGG AATGCTTGTGGTAACTTGGAGATGCTCAATTTGGCTCAAAATGATTTCACTGGGGATTTTCCTAATCAACTTAGTCGCTG CAAGAAGCTCCATTTTCTTGATTTAAGCTTTACCAACCTTACCGGCAAGCTTGCTAAAGACCTTCCTGCTCCATGCATGA CAGTCTTTGACGTCAGTGGAAATGTCTTATCCGGATCAATTCCTGAATTCTCTGGTAACGCATGTCCCTCAGCTCCTTCC TGGAATGGGAATCTATTTGAATCCGACAACAGGGCCCTTCCGTACGGATTCTTTTTTGCATTAAAGGTTCTTCAAAGGTC CCCTTTGTCGTCACTTGGAGATGTTGGCCGTTCTGTTATTCACAACTTTGGTCAAAACAATTTTATTAGCATGGATTCAT TGCCAATAGCGCGTTACAGATTAGGAAAGGGATTTGCTTACGCAATTCTTGTTGGAGAAAACAACCTGACAGGACCGTTT CCTACTAATTTATTTGAGAAATGTGATGGATTAAATGCATTACTTTTAAATGTGAGTTATACTCGGATATCTGGTCAGAT TTCTTCCAACTTTGGCAGAATGTGCAAATCATTAAAATTCTTGGATGCATCTGGAAATCAGATTACTGGCACGATCCCCT TTGATTTAGGGGACATGGTATCTCTTGTTGCTCTGAATCTTAGTCGGAACCATTTACAAGGTCAGATTCCCACCAGCCTT GGTCAGTTAAACGATCTGAAGTTTCTCTCCTTGGGCAATAATAACTTCAGTGGCTCCATTCCTACTAGCCTTGATCAGCT GCACTCCTTAGAAGTCTTGGATCTCTCTTCAAATTCTTTTACTGGTGAAATTCCAAAAGGTATTGAGAACTTGAGAAATC TGACTGTTGTTTTGCTCAACAATAACAAACTTTCTGGACAGATTCCTGCTGGTTTGGCAAATGTCAGTACACTGTCAGCA TTCAACGTCTCATTCAATAACTTGTCTGGGTCCTTGCCATCAAATAGCAGCTTGATAAAATGCAGCAGTGCTGTTGGGAA TCCATTTTTGCGCTCTTGCATTGGAGTTTCTCTTACTGTGCCATCAGCAGATCAACACGGGGTGGCTGATTATCCTAATT CTTATACTGCTGCACCACCAGAAGATACAGGCAAAACAAGTGGGAATGGATTCACTTCTATTGAAATAGCATGTATAACT TCTGCATCTGCCATTGTTTCTGTTCTTCTAGCCCTAATTGTCCTTTTTGTTTGTACGCGGAAGTGGAATCCAAGGTCCAG GGTTGTTGGGTCTACAAGAAAAGAAGTCACAGTGTTCACTGACGTTGGGTTTCCATTGACATTTGAAAGCGTTGTCCGGG CCACTGGAAATTTCAATGCAGGCAACTGCATTGGGAATGGGGGATTTGGGGCAACCTATAAGGCAGAGATATCACCAGGA AACTTAGTTGCAATAAAACGTCTCTCGGTGGGGAGATTTCAAGGTGCTCAACAATTCCATGCCGAGATTAAGACCCTTGG AAGGCTTCATCATCCAAATCTTGTCACCCTTATTGGTTATCATGCTAGTGATTCGGAGATGTTTCTCATATACAACTATT TGTCAGGTGGTAATCTGGAAAAGTTTATCCAGGAGAGGTCCACAAGGGCTGTGGATTGGAGAATTCTTCACAAGATTGCA TTGGATATAGCCCGTGCACTTGCATACCTGCATGATCAGTGCGTACCGCGAGTCCTCCATCGAGATGTCAAGCCCAGTAA TATCTTGTTGGATGATGATTATAATGCTTATCTATCTGACTTTGGATTGGCTAGGCTTCTCGGAACTTCAGAAACTCATG CCACCACCGGTGTAGCGGGAACATTCGGTTATGTTGCTCCTGAATACGCCATGACTTGCCGCGTTTCTGACAAGGCTGAT GTGTATAGCTATGGTGTGGTGCTTCTGGAGTTACTCTCAGACAAGAAGGCGTTGGATCCTTCATTTTCTTCATATGGGAA TGGTTTCAACATTGTAGCGTGGGCATGCATGCTACTCCGGCAAGGCCAGGCAAAAGATTTCTTCACTGCTGGCTTATGGG ATGCTGCACCTGCAGATGATTTGGTTGAGGTCCTGCACTTGGCTGTTGTTTGTACAGTTGAGACCCTCTCCACCCGACCG ACCATGAAACAGGTTGTGCGGCGGCTGAAGCAACTTCAGCCACCATCGTGTTAA
Protein sequence (LotjaGi1g1v0512900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFSSSTTSTTKWRRFFQLCTLFWVLFFSGNNHAVSAVDSDDGSVLFQLRNSLSDPEGLLSSWDPTKGLSHCAWFGVSCDP SSHRVVAINVTGNGGNRKHPSPCSDFTEFPLYGFGIRRSCVGSGGALFGKVSPLFSKLTELRILSLPFNGFEGVIPDEIW GMNKLEVIDLEGNLISGYLPSRFSGLRSLRVLNLGFNRIVGEVPNSLSSVASLEILNLAGNGINGSVPGFVGRLRGVYLS FNLLTGSIPQEIGDDCGRLEHLDLSGNFLTLEIPNSLGNCSQLRTISLHSNILQDVIPAELGKLRKLEVLDVSRNTLGGL VPPELGHCMELSVLVLSNLFNPLPDVSGMARDSLTDQLVSVIDEYNYFEGPIPVEIMNLPKLKILWAPRANLEDSFPRSW NACGNLEMLNLAQNDFTGDFPNQLSRCKKLHFLDLSFTNLTGKLAKDLPAPCMTVFDVSGNVLSGSIPEFSGNACPSAPS WNGNLFESDNRALPYGFFFALKVLQRSPLSSLGDVGRSVIHNFGQNNFISMDSLPIARYRLGKGFAYAILVGENNLTGPF PTNLFEKCDGLNALLLNVSYTRISGQISSNFGRMCKSLKFLDASGNQITGTIPFDLGDMVSLVALNLSRNHLQGQIPTSL GQLNDLKFLSLGNNNFSGSIPTSLDQLHSLEVLDLSSNSFTGEIPKGIENLRNLTVVLLNNNKLSGQIPAGLANVSTLSA FNVSFNNLSGSLPSNSSLIKCSSAVGNPFLRSCIGVSLTVPSADQHGVADYPNSYTAAPPEDTGKTSGNGFTSIEIACIT SASAIVSVLLALIVLFVCTRKWNPRSRVVGSTRKEVTVFTDVGFPLTFESVVRATGNFNAGNCIGNGGFGATYKAEISPG NLVAIKRLSVGRFQGAQQFHAEIKTLGRLHHPNLVTLIGYHASDSEMFLIYNYLSGGNLEKFIQERSTRAVDWRILHKIA LDIARALAYLHDQCVPRVLHRDVKPSNILLDDDYNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKAD VYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACMLLRQGQAKDFFTAGLWDAAPADDLVEVLHLAVVCTVETLSTRP TMKQVVRRLKQLQPPSC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | - | – | |
| SignalP_EUK | 1 | 36 | 36 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 33 | 33 | - | – | |
| Phobius | 1 | 15 | 15 | - | – | |
| Phobius | 16 | 27 | 12 | - | – | |
| Phobius | 28 | 36 | 9 | - | – | |
| PANTHER | 32 | 1133 | 1102 | 0.0 | – | |
| PANTHER | 32 | 1133 | 1102 | 0.0 | – | |
| Phobius | 37 | 798 | 762 | - | – | |
| Pfam | 39 | 79 | 41 | 1.1E-8 | ||
| SUPERFAMILY | 132 | 249 | 118 | 4.31E-25 | – | |
| SMART | 162 | 185 | 24 | 140.0 | ||
| SMART | 186 | 210 | 25 | 31.0 | ||
| SMART | 231 | 255 | 25 | 250.0 | ||
| Gene3D | 232 | 446 | 215 | 1.3E-50 | ||
| SUPERFAMILY | 234 | 735 | 502 | 9.52E-54 | – | |
| SMART | 256 | 280 | 25 | 250.0 | ||
| Pfam | 258 | 280 | 23 | 0.011 | ||
| SMART | 304 | 328 | 25 | 29.0 | ||
| Gene3D | 447 | 752 | 306 | 3.8E-55 | ||
| SMART | 619 | 643 | 25 | 37.0 | ||
| Pfam | 621 | 679 | 59 | 5.0E-7 | ||
| SMART | 667 | 690 | 24 | 30.0 | ||
| SMART | 691 | 714 | 24 | 110.0 | ||
| TMHMM | 796 | 818 | 23 | - | – | |
| Phobius | 799 | 818 | 20 | - | – | |
| Phobius | 819 | 1137 | 319 | - | – | |
| Gene3D | 820 | 933 | 114 | 5.6E-28 | – | |
| SUPERFAMILY | 840 | 1129 | 290 | 2.56E-74 | ||
| ProSiteProfiles | 858 | 1132 | 275 | 39.241 | ||
| SMART | 858 | 1136 | 279 | 1.3E-34 | ||
| Pfam | 861 | 1125 | 265 | 2.9E-44 | ||
| CDD | 864 | 1132 | 269 | 8.6284E-86 | – | |
| ProSitePatterns | 864 | 886 | 23 | - | ||
| Gene3D | 934 | 1135 | 202 | 3.2E-56 | – | |
| ProSitePatterns | 978 | 990 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0512900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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