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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0529200 |
| Transcript ID | LotjaGi1g1v0529200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RNA polymerase II C-terminal domain phosphatase-like protein; TAIR: AT2G33540.1 C-terminal domain phosphatase-like 3; Swiss-Prot: sp|Q8LL04|CPL3_ARATH RNA polymerase II C-terminal domain phosphatase-like 3; TrEMBL-Plants: tr|I1KWR8|I1KWR8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0529200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:105567118..105575319) extracted from Lotus japonicus Gifu genome v1.2.
CGTCATTCTCATTCGTGAGGCGCATGGTGTTCCTTTTCAGGATCAGTGACGTGTACGGTCCAGATTCCAATTCCCACTCA AACTTAGATTCTCCTTTCATATCGTATCCCTATAAAACCCTCTCTCTCATCATCATCTTTCTTATTCTTCTTTCGCTACT CGCGTATGTGAATTTTTTCTACCTATTTTTTTTTTTCTCACCATTTCTCTGCGATTCGAAAACTCGATTCTCGCACTTCG TCGCCGTCGTCGATTCCCGGATCCGAACCCTGCGATTCACGATCTCGATCTTGATCAGAATCTCCGATTCATCTGTAACA TTGTTGTAGATTGCTAAATCTCGCTGGATCTCGAGGAATCGAAACTGGAACGGAACCCTAATTTAATCATCTAGCCCTAA ATTTATCGAGATTTCGTGTTTGGTTTGTAATTGTAACGTTTGTTGTTGTTGTTTTTACTATATGGTTTTTGGATCGTTCT TGGGTTGTGAGAAACTGAGGAATTTGGAGGCGATGGGGAAGGAGGTTGAGGATGTGGATGTGGAGGAAGGTGAGATTTCG GATGGTACTGCTTCGGTGGAAGAGATCAGTGCGGAGGATTTCAATAAGCAAGACGCTGTTAAGGTGAATAATAATAACAA CAACAATAAGACTGATGAAGCTAGGGTTAAAGCTGTTCATGATCTTTACTCTAGGTACCCAAATATATGCCGCGGTTACG CGTCGGGTTTGTACAATCTTGCTTGGGCACAAGCTGTGCAGAATAAGCCTTTGAATGATATTTTTGTGATGGATGTTGAT TCTGATGCAAATGGTAATGGTATCAGCAAGAATCGAATGTCGTCGGGTGGTTCTGTGGATTCTAAGGAGGTTGTGGTGGT GGATGTTGAGGATGGGGAGCTGGAGGAGGGTGAGATTGATGCTGATGCTGATGTTGATGTTGACCATGAAGCAAGAGCAG GTGGTGGTGGTGAGTGTGAGGGTGGTGATGAGGTGATTGTTGATGGTTCTGAGGCTATTCCCAATTCTAAGCTGCTTGGT GTTAGGAATGTTCTTGAGAGTGTTAATGTTGCTAATGTGGTTAAGTAAGTGAAGCTGTTCATGGGTTTTATTGTTTCCAT TTTTAATCTGAATTGCTTACTTTGGAGTATGTTACAACATTGAGTTGATTGTTTTTGTTGCTGTTGTTGTCGTAGATCGT TTGCTGAAACTTGCACTAGGCTGCAGAGTGTCTTTGAGGACTTGCCTCAAGTGTTATCAGGACTTGCTGTTTCTGAAAAG GATAATCTTGTTCGTTTGTCATTCGATGCAATTGGAGTAGTTTATTCTGTAAGACACTCAGGATCTTTCGTTATCATTAC GGGAATAGCGTCACGATTGTTTAATTTTTTTTTGTATTCGTTGTAGGTGTTCTACTCTATGGACAATTTGCTAAAGGAGC AGAACAAGGATGGCATATCAAGGTTTTTAATGTAGAAGTTTTTAGTTTTATATTTCTGAATAGTTGCAACACCCCCTAAA TCCTAACTTTTCCTTGTTGCGATTTTCGTGTTAGATTACTTTCTTCTGTGAAGGATCTTCACGCCGATTTATTTTCTACA GAGCATATGATTGAGGTGATGTTTAATGCAACCCCCCATTGGGGAAGCAGTTTCCTTTCCCTCCTTGTAATCCCCATTTT GTAAAATAAAAATGAGATAGAATCTAAAACTCGGTTGCTTCTTCCTACAGATTCAGGTCATGGTTACTGCAGTCAATTCT GTTGGTGCTTTAGGCAATGATGCTATTGAAGATGAGAAAAAATTGCAGACCCATGAGACAAAGACTCAGGAGATTCAAGC TGTAAAAGCTCCTGAATTGAGTTCTTATAGTAAGCCTTCACATAGCGTCTCAACTGAGGCGTCCGAAGCTTTTAAATCTG GACTAAGTAATTTTAAAGGTAGAGGGATTTTGCTCCCTCTATTAGACCTTCATGGTGATCATGATGCCGATAGCTTACCA TCACCCACCCGAGAAGCGCCGTCCTGCTTCCCTGTAAATAAATCAATGTCTATTAGCGAGGGGAGGGTTGGGTCTGGGTT GCCTTCTAGCAAGATGAAGGCTAGGAAATTGGAATTGGATAGTGAAGATTCTAAGATTCATCTCTATGAAACTGATGCTT TAAAAGCTGTTTCCACATATCAACAAAAGTTTAATCGAAGTTCCTTTTTCACATATGATAAACTTCCAAGTCCAACCCCT TCTGGTGATTGTGAGGAAGAGGCTGTAGACATGAATGATGAGGTCTCTAGTTTTTCTATAACGAGCTCTAAGCCAACCCT TTTGGATCAGCTGCCTGTTTCTTCTACTTCCATGGATAGGTCCTCTAGCATGCATGGATCGATTAATTCTAAACTTGACG CGGTAGGTTCTGTGTCTTACCCTGTGAAAAGTTCAGTGAAGAGTAGAGATCCTAGGCTTCGTTCAATTAGTTCTGATGCA GGAGCTTTAGATCTTAACCAACCTTCAATGACACAAAGTGTGCCTAAAGTGGAATATTCTAGTACAACAATCTCAAGAAA ACAAAAGGCTGTAGAAGAGCCTTCTTTTGATGTTGCTGTATCAAAAAGACTTAAAAGTTCCTTGGAAAATCCTGACCGTA ATACAACAGAGGTAAGAACTGCTGCTGGAAATGGTGGTTGGTTGGAAGAAACTGCTACCACAGGATCTCAGTTGTTAGAA AAGAACCATTTAATTGAGAAAAGGGAAGCTGAGCACAAAAATACTTTGATTTTTGGTGCTGGTAACATCAATATGACAAG TAATCGAAATGAGCAGGCTCCAGTTACAACTAGCAACATGACAGCTTCTTTACCTGCTTTATTGAAAGATATAGCTGTAA ACCCAACCATGTTGCTAAACATACTTATAGAGCAGCAGCAGAGATTAGCAGCAGAATCCCAAAAGAAATCTGCGGATTCC GCTACAACTACACTGCATCAAACAAGCTCAAATTCAGCATTGGGAATGAACCCAACTGTGAGTGCTGGTCCATCATTGAC TACTGGTTTTCTGCAAAGTTCGGTTGGGATGCTTCCAGTTTCATCACACCCAACTTCCACGGTAAAATGCTTTTTGTGAT ATGTTTTTTTAAATGATATAGCCAGCGGTTGTGGTGTTACCTTCTAATTATCTATTTCTTCTCTTGCTTTTGATAATTAA CCTGAAATTTTTAACATTTTGATCCTTGATTATGAATGAACTTATAACCTAAATTTGTTTGCAAAATTTTAAGGCCAGAT AATTGTGTAACGGGAATCACTTGAAGCTAAATGTTTTTTTTTTAATGTCATTGGCAATCAGGCACAAAGCCCTCCACGTG ATTCAGGAAAGATTCGCATGAAACCGCGTGATCCACGGCGCATTCTCCATGGAGGTGAACAATTCAAAGCCACTTTATCC CCTATGTCGAACAACCAGGGAACTCTGGACAATGTATTGGCCCAGAAGCTTGAGGTTAGGACTGAGACAACATCGGCGCC TACTCAATCAATTGTACAACCTGATATTGCTCGCCAGTTCACCAGTAATCTGAAAAACCTTGCTGATATTATGTCTGTTT CGCAAGAATCTTCAAAGCACTCTTCCGCTCCTCAAAGTTTTTCTTCAGCATCTGTTCCTCTTATATCAGATAGAGCTGAA CAGAAATCTGCTGCGTCTAACTCTCAGAATCTGCAGGCTGGCATAGGATCAGCTCCTGAAACATTTGGATCAGGTTCCTC TCGATCCCAGAATAAATGGGGCGATCTGGAGCATATTTTGGATGGTTTTGATGAGCAGCAGAAAGCTGCTATACACATAG AAAGGGCTAGGAGGATGAAAGAACAGAATAAAATGTTTGCTGCTAGGAAATTGTGCCTTGTATTGGACCTAGATCATACA CTTCTTAATTCTGCTAAGGTAATTTACATGGAATGGCTCTCCTGTGAATCTAAGTTTGTAAAATTGCATATTAACAGGTT CTATTTCAGTTTGTGGAAGTTGATCCAGTGCACGAAGAAATGTTGAGGAAGAAAGAACAGGAGGAACGAGAGAAACCTCC GAGTCAGAGACTCCTTTTTCGTTTTCCTCATATGGGAATGTGGACTAAACTCAGACCGGGAGTTTGGAACTTCTTGGAGA AGGTAAAATGAATTATGTTAGTTGTTTTAGGCATGGCATTGTAGTTGTACACCAGGGCTTAAATTAAATTGAAGAATTCA CATCTTTCCCAATTGCTTTATAGGCTAGTAAGCTCTTTGAGCTGCATGTTTACACTATGGGAAACAAGCTATACGCGACG GAAATGGCTAAGTTGCTTGATCCAAAGGGGGCATTGTTTGCTGGGAGAGTTATTTCTAGAGGTGATGATAATGAATCCCT TGATGGTGATGCTCCTAAAAGCAAAGATTTGGATGGCGTTTTGGGTATGGAATCATCGGTTGTAATTATAGATGATTCTG TGAGAGTCTGGCCTCATCACAAAGCGAACCTTATAGTGGTTGAAAGGTCAGTGTAACATGCGTTTCAATCTTACATGCAT TTCTTTACCACTCTTATAGATTCAGTGGGCGTGGCATCCCTGTATTAAGTTTTAAGATATTGCAGGTATATATACTTCCC CTGTAGTAGACGTCAATTTGGACTTCATGGTCCTTCTCTTCTTGAAATTGATGTCGATGAGAGACCTGATACTGGAACTC TAGCAGCCTCTTTGGCGGTGAGCTCATAGTCAATTTTTTTCTTTGATTTGGGACGGTTTGTTATTTTACAGTTCATAATT CCTTCTCTTCCACAAGTAGGTTATTGAGAGAATACACCAAAACTTTTTTGCTTCACAATCTTTAGAAGATATGGATGTCA GACATATCCTAGAATGTGAGCAGAAAAAAATCTTGGCTGGATGTCGAATAGTATTCAGTAGGGTGGTTCCGGTTGGCGAA ATTCCCCACCTTCACCCTTTGTGGAAGATGGCCGAACAATTTGGTGCTGTTTGCACAAACCAGATTGATGAGGAGGTTAC TCATGTAGTTGCAGGTTCCCTTGGGACTGATAAGGTATAGTTTTATTTATAAACTTTCAGCACATTACAGCAGTGCGTCC TAGTGTTATTTTGTTTACTTATTTTATCATTGAAGAAAAAAAAAAATAGATGCATGGAATTTTGCTTTATGTCAAAATAT AGAGTAGCACTTGATAAAAAAACCGTGCCTCAATCCCTGAAAAATTCCAAGTGTAAATGAAATAGACATGGGAAGCAATT TTATCCATCGTTTAGGCTATGTTTGGATATCCCCTAGGCACCGGTGCTATTACGCACTTCAAGATAAAGAGTGAATGGAA CCTTCTTATTAATCAGAATGAAGGTCTGTTCACGTTGCTCTCAACTAGTATTGAAAGACACTTCATTTGATTTAAGTCTA CAAAAAGGTGGATCTTGTGGTGATCAGTCAACAACGCCAGCCACTTAAGCTTAGTAGTCCTCGACATATTTGCTGAAATC AACTAATAGAAAGACCATCTAACTTGGCTTTATCATTTATAGAGCCCTTACTTTTGTGTATTTTCTGCAACTGCTCCTAT ATCTTCACTTGCTTCCACTGGGACTGAACATGGTTTAAAATCTTTACTTCTTATCTTCTCTGGTAGTCTGATATCTAACT AGTGCTACTTCCTTTGTTCTGAGCAGGTAAATTGGGGTCTTTCCACTGGAAAATTTGTTGTCCATCCTGGCTGGTGAGTA TCGCATAACTTACATTCATCCTTGTCCTTTTCAGCCCCTTTCTTTTTAAAATTCTGAATGTGACTTGTGCTGCTTCTTTC CCCCTCCCTTATTTAAAAAACAGGGTGGAAGCATCAGCATTGCTATATAGGAGGGCGAATGAGCATGATTTTCCCACTAA ACCACTATAAAATTAACCATATAATCTCTGGTTAACTAAAATACGGGAAACATAAATCAAGAATCACATTGATTCGGGTG TCTGAAATCACCAGATCAGAATTGGTCTGGGGAAGCATTTTTAATGCCTGCCCATCGGAGCTGGCGGTTGATGAGTGTAA TTTCACTCAGAGGCCAGTTTCTGAGGACTTAAATGGAGAACTGTAAAAATGCCCTGTGGTTTTGGGATTTTCCTTCTGGG ATGGGTGCTGAAAGGGCCTAAAATGAGTTGACAGCTTTAGGGAGTAGGTGGTTGATATATTGTGGAGGTGGCTTTTGTGA AGCTCTCAGGAAATTTTGCCTGAGATGATGTCAAGAGTGGAAAATTTAAAGGCCTCAGCATTTTAGAGAGTTAAAACATG GAGGAATTGACTTAACCTAATTTAGGAAACAAAACTTCCTTGATTAGCTGAGTCTGAACTCTGAAGGGAGCTGGGGGCTC ATAATGGGGGGCTTATGGACCAGCAAATTGAATTTCTTAGAACTGAATTTGTATGTGAATGTGTCAGTGTATAATCATTG TGGGGCTCAGACTAATCACCATTCACTCCCCCAAAACATAAAATTCAGCAGGGAGGGGTTGGACAGAAAATCTTAGGAAG CTAACCATACATTATATAGGCAGGTCCCTTCTCCTTTTGGTTGCTTCTGCCTTCAATTTTTGCGACTTGCGTGGTCTTAC AACAAACCAATTGGAAAATTTTGAGAATTTGTAAAACACAACAATCTCATTCATGATGCCAATTTTTTCCTGGGAAACCC ATTGTGGTCAAGATAGCAAAATGGAGAAAGTAAAACGTATATGCTCCCTCGACCAAAAAAGAAAAAAACGTAAATGCTCC CGTTTTGTTCAAGATAGCAAAATGGAGAAAGTAAAACGTATATGCTCTATTATATACTGAAGAATAATAACAGTGAGATA CAGGTGCTGTACTGAAATGGACCACACAAACTAGTCCCTTATCTCACTGGTGCCAGAAACACTAACTTTGTCACTCTTTC TAATATTCTTTTTTTGATTGGTTAAAGTTTATGTAGATTTCACCAAATTGGTAGGGTGGTTCATATAATTTAGTGGACCC TACATGATTTTTAACCTATTAAAGAGTGAGTGTAGAAAGAGTGTTGAAGTGAGGTGTTGGTAGCATTTCTCTTGTGGAAA CATTAATCATCCCTTGCTATGTGTCTGTCCGGTTCTCATGACTCTAGTTTCCTTTTAGGCTAACGTTTTTATATAGAAAA ACTGTCATTTAGATCAGTAAATAAGTTTCACATGAATTTCGTTTCACTTGTTCAAACTTCAAACCAATCAATCCAGTAGT TTCTTAAAGGGTGCACCAAATGCGTGTCTTATATGTTCTTTTCCACATCAGAAGATTTTACCTCTCCAAGTACTTAAAAA CGGTTTCTACTTTTTGTAGATTAAATTCATTTATAAGCGGGGATTTTACTTAATGAAGTGCGGTTATAACTGTTGATAAG AAACTTAATGTCTTAAGATTAAACAACTTCATAGTCGCCACTACATGCACTGCCATTGGCTGCTATCATCATCACTGTCA TCGCCACCACCAGGTAACATGCACCTCCACCACCATCACTCCCAAATTTCCACTGATTTTCTTAATCAGCATAAATTAGA TAGAACTTCTAATACAACAAGTAACAGAAAAAAAAACTATATCAACTAACTTGGCATTTGGAAGAATGAAGCATAGAAAG AAAATTCAATGGAATAAAAGGAAGAACTCATATATTAAGTGAACTGTACTCAATACTCACAACATAATGTAATAAGTCAA CTCCTCTTGCTAGCACTGGAAACTTACTTACACGTGATCATAAGAAAGAGGAAGAGAAACCAAGAAGAATCCTTAAGCTC ATGATCTTCAAGTGTGAATTCCTTCAAACCCTAACACTCTGACGGAAACCCCAAAAATCATACAACACCCCATTTAGTGA ATTTTGAACCCAAATAAAAGATTAAGGTTATGCAATGCACGTGATATGCTACAAACATTGGTAGTTTTAATTAATTTTCA CACGAAAGTAAGTAAAAAGTTCATCCTTTAGCCCTGAAATTTAAATATGTAATATCGACTGTATATGTATTGATATTTTC TAATCCTCATACGATACAAATTATCATGCTTTTTCATATATTTACTCCTAAAATTATTTTTAAATTATGAAAAAAGTACA TAATATATATTAATATTTTATAATCTTTGTACAGTATCTGTT
CDS sequence (LotjaGi1g1v0529200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTTTGGATCGTTCTTGGGTTGTGAGAAACTGAGGAATTTGGAGGCGATGGGGAAGGAGGTTGAGGATGTGGATGT GGAGGAAGGTGAGATTTCGGATGGTACTGCTTCGGTGGAAGAGATCAGTGCGGAGGATTTCAATAAGCAAGACGCTGTTA AGGTGAATAATAATAACAACAACAATAAGACTGATGAAGCTAGGGTTAAAGCTGTTCATGATCTTTACTCTAGGTACCCA AATATATGCCGCGGTTACGCGTCGGGTTTGTACAATCTTGCTTGGGCACAAGCTGTGCAGAATAAGCCTTTGAATGATAT TTTTGTGATGGATGTTGATTCTGATGCAAATGGTAATGGTATCAGCAAGAATCGAATGTCGTCGGGTGGTTCTGTGGATT CTAAGGAGGTTGTGGTGGTGGATGTTGAGGATGGGGAGCTGGAGGAGGGTGAGATTGATGCTGATGCTGATGTTGATGTT GACCATGAAGCAAGAGCAGGTGGTGGTGGTGAGTGTGAGGGTGGTGATGAGGTGATTGTTGATGGTTCTGAGGCTATTCC CAATTCTAAGCTGCTTGGTGTTAGGAATGTTCTTGAGAGTGTTAATGTTGCTAATGTGGTTAAATCGTTTGCTGAAACTT GCACTAGGCTGCAGAGTGTCTTTGAGGACTTGCCTCAAGTGTTATCAGGACTTGCTGTTTCTGAAAAGGATAATCTTGTT CGTTTGTCATTCGATGCAATTGGAGTAGTTTATTCTGTGTTCTACTCTATGGACAATTTGCTAAAGGAGCAGAACAAGGA TGGCATATCAAGATTACTTTCTTCTGTGAAGGATCTTCACGCCGATTTATTTTCTACAGAGCATATGATTGAGATTCAGG TCATGGTTACTGCAGTCAATTCTGTTGGTGCTTTAGGCAATGATGCTATTGAAGATGAGAAAAAATTGCAGACCCATGAG ACAAAGACTCAGGAGATTCAAGCTGTAAAAGCTCCTGAATTGAGTTCTTATAGTAAGCCTTCACATAGCGTCTCAACTGA GGCGTCCGAAGCTTTTAAATCTGGACTAAGTAATTTTAAAGGTAGAGGGATTTTGCTCCCTCTATTAGACCTTCATGGTG ATCATGATGCCGATAGCTTACCATCACCCACCCGAGAAGCGCCGTCCTGCTTCCCTGTAAATAAATCAATGTCTATTAGC GAGGGGAGGGTTGGGTCTGGGTTGCCTTCTAGCAAGATGAAGGCTAGGAAATTGGAATTGGATAGTGAAGATTCTAAGAT TCATCTCTATGAAACTGATGCTTTAAAAGCTGTTTCCACATATCAACAAAAGTTTAATCGAAGTTCCTTTTTCACATATG ATAAACTTCCAAGTCCAACCCCTTCTGGTGATTGTGAGGAAGAGGCTGTAGACATGAATGATGAGGTCTCTAGTTTTTCT ATAACGAGCTCTAAGCCAACCCTTTTGGATCAGCTGCCTGTTTCTTCTACTTCCATGGATAGGTCCTCTAGCATGCATGG ATCGATTAATTCTAAACTTGACGCGGTAGGTTCTGTGTCTTACCCTGTGAAAAGTTCAGTGAAGAGTAGAGATCCTAGGC TTCGTTCAATTAGTTCTGATGCAGGAGCTTTAGATCTTAACCAACCTTCAATGACACAAAGTGTGCCTAAAGTGGAATAT TCTAGTACAACAATCTCAAGAAAACAAAAGGCTGTAGAAGAGCCTTCTTTTGATGTTGCTGTATCAAAAAGACTTAAAAG TTCCTTGGAAAATCCTGACCGTAATACAACAGAGGTAAGAACTGCTGCTGGAAATGGTGGTTGGTTGGAAGAAACTGCTA CCACAGGATCTCAGTTGTTAGAAAAGAACCATTTAATTGAGAAAAGGGAAGCTGAGCACAAAAATACTTTGATTTTTGGT GCTGGTAACATCAATATGACAAGTAATCGAAATGAGCAGGCTCCAGTTACAACTAGCAACATGACAGCTTCTTTACCTGC TTTATTGAAAGATATAGCTGTAAACCCAACCATGTTGCTAAACATACTTATAGAGCAGCAGCAGAGATTAGCAGCAGAAT CCCAAAAGAAATCTGCGGATTCCGCTACAACTACACTGCATCAAACAAGCTCAAATTCAGCATTGGGAATGAACCCAACT GTGAGTGCTGGTCCATCATTGACTACTGGTTTTCTGCAAAGTTCGGTTGGGATGCTTCCAGTTTCATCACACCCAACTTC CACGGCACAAAGCCCTCCACGTGATTCAGGAAAGATTCGCATGAAACCGCGTGATCCACGGCGCATTCTCCATGGAGGTG AACAATTCAAAGCCACTTTATCCCCTATGTCGAACAACCAGGGAACTCTGGACAATGTATTGGCCCAGAAGCTTGAGGTT AGGACTGAGACAACATCGGCGCCTACTCAATCAATTGTACAACCTGATATTGCTCGCCAGTTCACCAGTAATCTGAAAAA CCTTGCTGATATTATGTCTGTTTCGCAAGAATCTTCAAAGCACTCTTCCGCTCCTCAAAGTTTTTCTTCAGCATCTGTTC CTCTTATATCAGATAGAGCTGAACAGAAATCTGCTGCGTCTAACTCTCAGAATCTGCAGGCTGGCATAGGATCAGCTCCT GAAACATTTGGATCAGGTTCCTCTCGATCCCAGAATAAATGGGGCGATCTGGAGCATATTTTGGATGGTTTTGATGAGCA GCAGAAAGCTGCTATACACATAGAAAGGGCTAGGAGGATGAAAGAACAGAATAAAATGTTTGCTGCTAGGAAATTGTGCC TTGTATTGGACCTAGATCATACACTTCTTAATTCTGCTAAGTTTGTGGAAGTTGATCCAGTGCACGAAGAAATGTTGAGG AAGAAAGAACAGGAGGAACGAGAGAAACCTCCGAGTCAGAGACTCCTTTTTCGTTTTCCTCATATGGGAATGTGGACTAA ACTCAGACCGGGAGTTTGGAACTTCTTGGAGAAGGCTAGTAAGCTCTTTGAGCTGCATGTTTACACTATGGGAAACAAGC TATACGCGACGGAAATGGCTAAGTTGCTTGATCCAAAGGGGGCATTGTTTGCTGGGAGAGTTATTTCTAGAGGTGATGAT AATGAATCCCTTGATGGTGATGCTCCTAAAAGCAAAGATTTGGATGGCGTTTTGGGTATGGAATCATCGGTTGTAATTAT AGATGATTCTGTGAGAGTCTGGCCTCATCACAAAGCGAACCTTATAGTGGTTGAAAGGTATATATACTTCCCCTGTAGTA GACGTCAATTTGGACTTCATGGTCCTTCTCTTCTTGAAATTGATGTCGATGAGAGACCTGATACTGGAACTCTAGCAGCC TCTTTGGCGGTTATTGAGAGAATACACCAAAACTTTTTTGCTTCACAATCTTTAGAAGATATGGATGTCAGACATATCCT AGAATGTGAGCAGAAAAAAATCTTGGCTGGATGTCGAATAGTATTCAGTAGGGTGGTTCCGGTTGGCGAAATTCCCCACC TTCACCCTTTGTGGAAGATGGCCGAACAATTTGGTGCTGTTTGCACAAACCAGATTGATGAGGAGGTTACTCATGTAGTT GCAGGTTCCCTTGGGACTGATAAGGTAAATTGGGGTCTTTCCACTGGAAAATTTGTTGTCCATCCTGGCTGGGTGGAAGC ATCAGCATTGCTATATAGGAGGGCGAATGAGCATGATTTTCCCACTAAACCACTATAA
Protein sequence (LotjaGi1g1v0529200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVFGSFLGCEKLRNLEAMGKEVEDVDVEEGEISDGTASVEEISAEDFNKQDAVKVNNNNNNNKTDEARVKAVHDLYSRYP NICRGYASGLYNLAWAQAVQNKPLNDIFVMDVDSDANGNGISKNRMSSGGSVDSKEVVVVDVEDGELEEGEIDADADVDV DHEARAGGGGECEGGDEVIVDGSEAIPNSKLLGVRNVLESVNVANVVKSFAETCTRLQSVFEDLPQVLSGLAVSEKDNLV RLSFDAIGVVYSVFYSMDNLLKEQNKDGISRLLSSVKDLHADLFSTEHMIEIQVMVTAVNSVGALGNDAIEDEKKLQTHE TKTQEIQAVKAPELSSYSKPSHSVSTEASEAFKSGLSNFKGRGILLPLLDLHGDHDADSLPSPTREAPSCFPVNKSMSIS EGRVGSGLPSSKMKARKLELDSEDSKIHLYETDALKAVSTYQQKFNRSSFFTYDKLPSPTPSGDCEEEAVDMNDEVSSFS ITSSKPTLLDQLPVSSTSMDRSSSMHGSINSKLDAVGSVSYPVKSSVKSRDPRLRSISSDAGALDLNQPSMTQSVPKVEY SSTTISRKQKAVEEPSFDVAVSKRLKSSLENPDRNTTEVRTAAGNGGWLEETATTGSQLLEKNHLIEKREAEHKNTLIFG AGNINMTSNRNEQAPVTTSNMTASLPALLKDIAVNPTMLLNILIEQQQRLAAESQKKSADSATTTLHQTSSNSALGMNPT VSAGPSLTTGFLQSSVGMLPVSSHPTSTAQSPPRDSGKIRMKPRDPRRILHGGEQFKATLSPMSNNQGTLDNVLAQKLEV RTETTSAPTQSIVQPDIARQFTSNLKNLADIMSVSQESSKHSSAPQSFSSASVPLISDRAEQKSAASNSQNLQAGIGSAP ETFGSGSSRSQNKWGDLEHILDGFDEQQKAAIHIERARRMKEQNKMFAARKLCLVLDLDHTLLNSAKFVEVDPVHEEMLR KKEQEEREKPPSQRLLFRFPHMGMWTKLRPGVWNFLEKASKLFELHVYTMGNKLYATEMAKLLDPKGALFAGRVISRGDD NESLDGDAPKSKDLDGVLGMESSVVIIDDSVRVWPHHKANLIVVERYIYFPCSRRQFGLHGPSLLEIDVDERPDTGTLAA SLAVIERIHQNFFASQSLEDMDVRHILECEQKKILAGCRIVFSRVVPVGEIPHLHPLWKMAEQFGAVCTNQIDEEVTHVV AGSLGTDKVNWGLSTGKFVVHPGWVEASALLYRRANEHDFPTKPL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 378 | 1244 | 867 | 0.0 | ||
| PANTHER | 378 | 1244 | 867 | 0.0 | – | |
| MobiDBLite | 379 | 410 | 32 | - | – | |
| MobiDBLite | 389 | 405 | 17 | - | – | |
| MobiDBLite | 694 | 754 | 61 | - | – | |
| MobiDBLite | 694 | 766 | 73 | - | – | |
| MobiDBLite | 859 | 891 | 33 | - | – | |
| Gene3D | 915 | 1155 | 241 | 3.6E-48 | ||
| SUPERFAMILY | 923 | 1097 | 175 | 5.6E-33 | ||
| ProSiteProfiles | 927 | 1107 | 181 | 29.037 | ||
| TIGRFAM | 927 | 1090 | 164 | 4.4E-50 | ||
| SMART | 930 | 1094 | 165 | 3.5E-53 | ||
| CDD | 931 | 1084 | 154 | 1.21448E-40 | – | |
| Pfam | 932 | 1088 | 157 | 4.0E-23 | ||
| CDD | 1142 | 1237 | 96 | 4.98783E-38 | – | |
| ProSiteProfiles | 1150 | 1242 | 93 | 11.17 | ||
| SMART | 1152 | 1232 | 81 | 1.6E-7 | ||
| Pfam | 1152 | 1227 | 76 | 4.9E-6 | ||
| SUPERFAMILY | 1154 | 1241 | 88 | 2.62E-17 | ||
| Gene3D | 1156 | 1242 | 87 | 9.5E-19 | ||
| Coils | 1245 | 1245 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphoprotein phosphatase activity | Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Molecular function | RNA polymerase II CTD heptapeptide repeat phosphatase activity | Catalysis of the reaction: phospho-(DNA-directed RNA polymerase II) + H2O = (DNA-directed RNA polymerase II) + phosphate. | ||
| Biological process | Dephosphorylation of RNA polymerase II C-terminal domain | The process of removing a phosphate group from an amino acid residue in the C-terminal domain of RNA polymerase II. Some dephosphorylation occurs during transcription while some may occur after the enzyme is released from the template in order to prepare it for the beginning of the transcription cycle again. RNA polymerase II with little or no phosphorylation is referred to as the hypophosphorylated or II(A) form. |
Expression pattern of LotjaGi1g1v0529200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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