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LotjaGi2g1v0292300.2

Overview

Field Value
Gene ID LotjaGi2g1v0292300
Transcript ID LotjaGi2g1v0292300.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Receptor protein kinase; TAIR: AT3G24240.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q9LHP4|RCH2_ARATH Receptor-like protein kinase 2; TrEMBL-Plants: tr|A0A0L9UTH1|A0A0L9UTH1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0292300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:76675738..76679694) extracted from Lotus japonicus Gifu genome v1.2.

ATGCTGAGCTCGAGGCAATCCTTCTACACCTCTTCCTTGTCCTCATCACTATTATGTATCATTCTTCTCCAAGCTAATCT TCTCTATGGCCTTGCCTTCTCTGCTAACCATGAAGCCTCAACTCTCTTCTCATGGCTCCATAGTTCTTCTTCATCATCAC CACCCCCTCCATCTTTCTCTAACTGGAATATTCTTGATAACAATCCATGCAACTGGACCTGTATTACATGCTCCTCACTA GGCTTTGTCACTGAAATCAACATACAATCCACCCCTCTTGAGCTTCCCGTACTTTTCAATCTCTCTTCATTCCCCTTTCT TCACAAGCTTGTAATTTCTGATGCCAATCTCACTGGAACCATCCCAGTTGACATTGGTGATTGCTCTGCTCTCTATGTTA TTGACCTGAGCTCCAACAATCTTGTTGGTTCTATTCCTGCAAGCATTGGCAAACTCCAGAAACTGGAGAATTTGTCTTTG AACTCTAACCAGCTTACTGGGAAAATTCCAGATGAGATAAGCAACTGCATTAGTCTGAAAAATCTTCTCCTTTTTGATAA TCAGCTAGATGGGACTCTCCCACCTTCTCTGGGAAAGTTGTCAAAACTTGAGGCTCTCAGAGCAGGAGGAAACAAAGGTA TAGTTGGAGAAATCCCTGAAGAGCTTGGAGAATGCAGAAATTTGACTGTGTTGGGGTTGGCTGATACAAGAATATCAGGT TCTTTGCCTGCTTCTTTGGGTCAGCTTAGAAAGCTTCAAACTTTGTCAATCTATACCACTATGCTATCTAGTGAAATTCC ACCAGAGTTAGGTAATTGTTCTGAACTTGTTGACTTGTTCCTATATGAAAATAGCCTATCAGGGTCTATTCCACCTGAGC TTGGCAAGTTAAAAAAGCTGGAGCAGTTGTTTCTATGGCAGAATAGTCTTGTGGGAGCTATCCCAGAAGAGATTGGTAAC TGTTCAAGCTTGAGGAATATTGACCTCTCTTTGAATTCTCTATCTGGAACTATACCTTTGTCTTTGGGGGGTCTTTTAGA GCTTGAAGAGTTCATGATTAGTGATAACAATGTGTCTGGCTCTATACCATCAAGTCTCTCAAATGCTAAAAGTCTTCAAC AGTTGCAAGTTGACACAAACCAGCTCTCAGGCTTGATTCCACCAGAGCTTGGGAAGTTGGAAAATCTATTAGTGTTCTTT GCTTGGCAGAACCAGCTTGAAGGAAGCATTCCTTCAACTTTGGGAAACTGCAGCAATTTACAAGCGCTGGACTTGTCTCG CAACGCGCTCACTGGTAGCATCCCTGGTGGCCTATTTCAGCTCCAAAACCTCACAAAGCTACTTCTCATTTCCAATGACA TATCAGGTTTTATACCATCAGAAATAGGAAGCTGCAGCTCACTCATAAGGTTGAGGCTTGGAAACAACAGGATCACGGGC AGCATACCTAAGACAATTGGCGGCCTCAAAAGCCTGAACTTCTTAGATCTCTCCGGGAACCGCCTCTCCGGGCCAGTGCC TGATGAGATTAGAACCTGCACAGAACTGCAAATGATAGACTTCAGCAGCAACAGCTTAGAAGGTCCACTTCCAAATTCTT TGTCATCACTGTCTTCACTGCAGGTACTAGATGCATCTTCAAACAAATTCTCAGGTTCCGTACCGGCGAGTTTAGGCCGT CTTGTTTCTTTAAATAAGCTAATCCTAGAGAATAACTTATTCTCTGGAACCATTCCTGCATCCCTTAGCATGTGCTCAAA TCTCCAACTACTTGATCTCAGTAGCAACCAACTCACTGGAAGCATACCAGCAGAGCTTGGCCATATAGAGACACTAGAAA TTGCTCTTAATCTTAGTTGCAATTCACTTAGTGGAGCAATCCCAGATCAGATATCTTCTCTCAACAAGCTTTCCATACTT GACCTTTCACATAATCAATTAGAAGGAGATTTGCAACCACTTGCTGAGCTTGATAACCTTGTCTCCCTCAATGTTTCTTA TAACAAATTAAGCGGATACCTACCAGATAACAAGCTTTTCAGGCAGTTATCATCGAAAGACCTCACTGGAAATCAAGGGC TATGCAATTCAGGTGAAGACTCATGCTTTGTAAAGGATTCTGCCAAGGATGATATGAAATTGAATGGAAATGATGCAAGG AAGTCACAGAAGCTCAAAATAACCATTGGATTGCTGATAGCCTTAGCAGTGATAATGTTAGTTATGGGGGTAACTGCTGT GGTCAAAGCAAAGAGAACAATCAGAGATGATGATTCAGAATTAGGAGACTCATGGCCTTGGCAATTCATACCATTCCAGA AGCTAAGTTTTTCAGTTGAACAAATTCTAAGATGCTTAGTTGATAGGAATATAATTGGGAAGGGATGTTCCGGTGTTGTT TATCGCGCTGAAATGGATACTGGTGAAGTCATTGCAGTGAAGAAACTATGGCCAATAACAAATGATGCTGCAGTGGATGT TTTCAAGGAAGATAAAAGTGGAGTTCGCGATTCGTTCTCAGCTGAGGTGAAGGCCCTTGGCTCGATTCGGCACAAGAACA TTGTCAGGTTCTTGGGTTGTTGTTGGAACAGGAGAACAAGGTTGCTTATCTTTGATTACATGGCAAATGGAAGTTTAAGC AGTTTACTTCATGAGAGGAGTGGGAATTCTCTAGAATGGGAACTCAGGTACAGAATCTTGTTAGGTGCTGCAGAAGGTTT GGCTTATCTGCACCATGACTGTGTCCCTCCTATAGTCCACAGAGATATTAAAGCCAATAACATCCTCATTGGCCTTGAAT TTGAACCTTACATTGCTGACTTTGGCTTGGCTAAGCTGGTTGATGATGGTGATTTTGGTCGTTCTTCCAATACAGTTGCT GGTTCCTATGGATATATTGCTCCAGGTTAGTGTGCCTTCCACACAAACTTCGATCACATTCTTTTCAAATTCTTATGCTT TTATAGGTGTAGGTAACTAGTTATAAGGAACAAATTTAGCAAGTATTGAATTAGATACGGTTGACAAATCCCACATAGAC TAGAGATATGGTCAAAATGGTCCTTATAAAGAGTAGAGAAAGAAAAACCCTCATCTTTGAGACTTTGAGCTAGCTTTGGG AGTTGAGTTAGGCCTAACCCAAATTCTAATAGATACAATTAATATCTTGGTTGAAAGGAAAACAAATGTCAGAAAACTGG ACCATAGCATGATTTCCAAACATTCTACTACTCTTTTGTTTTAGAAAGCTTCATATAGTTACTTCCACACAACTGGTTGG ATTTTTTCTCATCACATGTTACATCTCTTAACACATTTTACAAAATTTGTTTAGCATCTTGAAGCTGACTTTGAATTTAT CTCAGAATATGGCTACATGTTGAAGATCACAGAGAAGAGTGACGTTTACAGCTATGGTGTGGTGTTGCTGGAAGTCTTGA CAGGTAAGCAACCAATTGATCCAACCATACCAGATGGTCTACATGTTGTTGATTGGGTGAGACAGAAAAGGGGTATTGAA GTGCTTGATCCAAGCTTACTCTCTAGACCAGAATCAGAAATAGAGGAAATGATGCAGGCACTGGGAATAGCCTTGTTGTG TGTGAATTCATCCCCTGATGAGAGGCCAACAATGAGAGATATAGCCGCAATGCTCAAGGAGATAAAGCATGAGAGGGAGG AATATGCAAAATTTGATGTGCTTCTAAAAGGGTCTCCTGCAAATAGAAGCTGTGGAGGTGGTGGTGGAGTTCTGGCAACA TCTTCATCAGTATCAAGAAGCAACAACACAAGCTTCTCTGTGTCTTCTCTGCTTCATTCATCTTCAAGTGCCAACCTGAG TTTCAAATGATGAATTGAATATTTAAGGAGAGTATAAGCTTCTTATTCATGTCACTTGCTTTCTCAGTGATCCTTCTGAT ATTGTTTTTATGTGATTGTAAAGTTTGTTATAGCTGA 

CDS sequence (LotjaGi2g1v0292300.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTGAGCTCGAGGCAATCCTTCTACACCTCTTCCTTGTCCTCATCACTATTATGTATCATTCTTCTCCAAGCTAATCT TCTCTATGGCCTTGCCTTCTCTGCTAACCATGAAGCCTCAACTCTCTTCTCATGGCTCCATAGTTCTTCTTCATCATCAC CACCCCCTCCATCTTTCTCTAACTGGAATATTCTTGATAACAATCCATGCAACTGGACCTGTATTACATGCTCCTCACTA GGCTTTGTCACTGAAATCAACATACAATCCACCCCTCTTGAGCTTCCCGTACTTTTCAATCTCTCTTCATTCCCCTTTCT TCACAAGCTTGTAATTTCTGATGCCAATCTCACTGGAACCATCCCAGTTGACATTGGTGATTGCTCTGCTCTCTATGTTA TTGACCTGAGCTCCAACAATCTTGTTGGTTCTATTCCTGCAAGCATTGGCAAACTCCAGAAACTGGAGAATTTGTCTTTG AACTCTAACCAGCTTACTGGGAAAATTCCAGATGAGATAAGCAACTGCATTAGTCTGAAAAATCTTCTCCTTTTTGATAA TCAGCTAGATGGGACTCTCCCACCTTCTCTGGGAAAGTTGTCAAAACTTGAGGCTCTCAGAGCAGGAGGAAACAAAGGTA TAGTTGGAGAAATCCCTGAAGAGCTTGGAGAATGCAGAAATTTGACTGTGTTGGGGTTGGCTGATACAAGAATATCAGGT TCTTTGCCTGCTTCTTTGGGTCAGCTTAGAAAGCTTCAAACTTTGTCAATCTATACCACTATGCTATCTAGTGAAATTCC ACCAGAGTTAGGTAATTGTTCTGAACTTGTTGACTTGTTCCTATATGAAAATAGCCTATCAGGGTCTATTCCACCTGAGC TTGGCAAGTTAAAAAAGCTGGAGCAGTTGTTTCTATGGCAGAATAGTCTTGTGGGAGCTATCCCAGAAGAGATTGGTAAC TGTTCAAGCTTGAGGAATATTGACCTCTCTTTGAATTCTCTATCTGGAACTATACCTTTGTCTTTGGGGGGTCTTTTAGA GCTTGAAGAGTTCATGATTAGTGATAACAATGTGTCTGGCTCTATACCATCAAGTCTCTCAAATGCTAAAAGTCTTCAAC AGTTGCAAGTTGACACAAACCAGCTCTCAGGCTTGATTCCACCAGAGCTTGGGAAGTTGGAAAATCTATTAGTGTTCTTT GCTTGGCAGAACCAGCTTGAAGGAAGCATTCCTTCAACTTTGGGAAACTGCAGCAATTTACAAGCGCTGGACTTGTCTCG CAACGCGCTCACTGGTAGCATCCCTGGTGGCCTATTTCAGCTCCAAAACCTCACAAAGCTACTTCTCATTTCCAATGACA TATCAGGTTTTATACCATCAGAAATAGGAAGCTGCAGCTCACTCATAAGGTTGAGGCTTGGAAACAACAGGATCACGGGC AGCATACCTAAGACAATTGGCGGCCTCAAAAGCCTGAACTTCTTAGATCTCTCCGGGAACCGCCTCTCCGGGCCAGTGCC TGATGAGATTAGAACCTGCACAGAACTGCAAATGATAGACTTCAGCAGCAACAGCTTAGAAGGTCCACTTCCAAATTCTT TGTCATCACTGTCTTCACTGCAGGTACTAGATGCATCTTCAAACAAATTCTCAGGTTCCGTACCGGCGAGTTTAGGCCGT CTTGTTTCTTTAAATAAGCTAATCCTAGAGAATAACTTATTCTCTGGAACCATTCCTGCATCCCTTAGCATGTGCTCAAA TCTCCAACTACTTGATCTCAGTAGCAACCAACTCACTGGAAGCATACCAGCAGAGCTTGGCCATATAGAGACACTAGAAA TTGCTCTTAATCTTAGTTGCAATTCACTTAGTGGAGCAATCCCAGATCAGATATCTTCTCTCAACAAGCTTTCCATACTT GACCTTTCACATAATCAATTAGAAGGAGATTTGCAACCACTTGCTGAGCTTGATAACCTTGTCTCCCTCAATGTTTCTTA TAACAAATTAAGCGGATACCTACCAGATAACAAGCTTTTCAGGCAGTTATCATCGAAAGACCTCACTGGAAATCAAGGGC TATGCAATTCAGGTGAAGACTCATGCTTTGTAAAGGATTCTGCCAAGGATGATATGAAATTGAATGGAAATGATGCAAGG AAGTCACAGAAGCTCAAAATAACCATTGGATTGCTGATAGCCTTAGCAGTGATAATGTTAGTTATGGGGGTAACTGCTGT GGTCAAAGCAAAGAGAACAATCAGAGATGATGATTCAGAATTAGGAGACTCATGGCCTTGGCAATTCATACCATTCCAGA AGCTAAGTTTTTCAGTTGAACAAATTCTAAGATGCTTAGTTGATAGGAATATAATTGGGAAGGGATGTTCCGGTGTTGTT TATCGCGCTGAAATGGATACTGGTGAAGTCATTGCAGTGAAGAAACTATGGCCAATAACAAATGATGCTGCAGTGGATGT TTTCAAGGAAGATAAAAGTGGAGTTCGCGATTCGTTCTCAGCTGAGGTGAAGGCCCTTGGCTCGATTCGGCACAAGAACA TTGTCAGGTTCTTGGGTTGTTGTTGGAACAGGAGAACAAGGTTGCTTATCTTTGATTACATGGCAAATGGAAGTTTAAGC AGTTTACTTCATGAGAGGAGTGGGAATTCTCTAGAATGGGAACTCAGGTACAGAATCTTGTTAGGTGCTGCAGAAGGTTT GGCTTATCTGCACCATGACTGTGTCCCTCCTATAGTCCACAGAGATATTAAAGCCAATAACATCCTCATTGGCCTTGAAT TTGAACCTTACATTGCTGACTTTGGCTTGGCTAAGCTGGTTGATGATGGTGATTTTGGTCGTTCTTCCAATACAGTTGCT GGTTCCTATGGATATATTGCTCCAGAATATGGCTACATGTTGAAGATCACAGAGAAGAGTGACGTTTACAGCTATGGTGT GGTGTTGCTGGAAGTCTTGACAGGTAAGCAACCAATTGATCCAACCATACCAGATGGTCTACATGTTGTTGATTGGGTGA GACAGAAAAGGGGTATTGAAGTGCTTGATCCAAGCTTACTCTCTAGACCAGAATCAGAAATAGAGGAAATGATGCAGGCA CTGGGAATAGCCTTGTTGTGTGTGAATTCATCCCCTGATGAGAGGCCAACAATGAGAGATATAGCCGCAATGCTCAAGGA GATAAAGCATGAGAGGGAGGAATATGCAAAATTTGATGTGCTTCTAAAAGGGTCTCCTGCAAATAGAAGCTGTGGAGGTG GTGGTGGAGTTCTGGCAACATCTTCATCAGTATCAAGAAGCAACAACACAATTTGTTATAGCTGA 

Protein sequence (LotjaGi2g1v0292300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLSSRQSFYTSSLSSSLLCIILLQANLLYGLAFSANHEASTLFSWLHSSSSSSPPPPSFSNWNILDNNPCNWTCITCSSL GFVTEINIQSTPLELPVLFNLSSFPFLHKLVISDANLTGTIPVDIGDCSALYVIDLSSNNLVGSIPASIGKLQKLENLSL NSNQLTGKIPDEISNCISLKNLLLFDNQLDGTLPPSLGKLSKLEALRAGGNKGIVGEIPEELGECRNLTVLGLADTRISG SLPASLGQLRKLQTLSIYTTMLSSEIPPELGNCSELVDLFLYENSLSGSIPPELGKLKKLEQLFLWQNSLVGAIPEEIGN CSSLRNIDLSLNSLSGTIPLSLGGLLELEEFMISDNNVSGSIPSSLSNAKSLQQLQVDTNQLSGLIPPELGKLENLLVFF AWQNQLEGSIPSTLGNCSNLQALDLSRNALTGSIPGGLFQLQNLTKLLLISNDISGFIPSEIGSCSSLIRLRLGNNRITG SIPKTIGGLKSLNFLDLSGNRLSGPVPDEIRTCTELQMIDFSSNSLEGPLPNSLSSLSSLQVLDASSNKFSGSVPASLGR LVSLNKLILENNLFSGTIPASLSMCSNLQLLDLSSNQLTGSIPAELGHIETLEIALNLSCNSLSGAIPDQISSLNKLSIL DLSHNQLEGDLQPLAELDNLVSLNVSYNKLSGYLPDNKLFRQLSSKDLTGNQGLCNSGEDSCFVKDSAKDDMKLNGNDAR KSQKLKITIGLLIALAVIMLVMGVTAVVKAKRTIRDDDSELGDSWPWQFIPFQKLSFSVEQILRCLVDRNIIGKGCSGVV YRAEMDTGEVIAVKKLWPITNDAAVDVFKEDKSGVRDSFSAEVKALGSIRHKNIVRFLGCCWNRRTRLLIFDYMANGSLS SLLHERSGNSLEWELRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFGRSSNTVA GSYGYIAPEYGYMLKITEKSDVYSYGVVLLEVLTGKQPIDPTIPDGLHVVDWVRQKRGIEVLDPSLLSRPESEIEEMMQA LGIALLCVNSSPDERPTMRDIAAMLKEIKHEREEYAKFDVLLKGSPANRSCGGGGGVLATSSSVSRSNNTICYS 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 30 30 -
Phobius 1 11 11 -
Phobius 12 23 12 -
TMHMM 13 35 23 -
Phobius 24 30 7 -
Phobius 31 726 696 -
Gene3D 31 193 163 3.0E-36
PANTHER 34 1078 1045 0.0
PANTHER 34 1078 1045 0.0
Pfam 36 78 43 1.1E-4
SUPERFAMILY 110 502 393 2.51E-65
ProSiteProfiles 130 152 23 4.963
SMART 152 176 25 14.0
SMART 152 175 24 45.0
ProSiteProfiles 154 176 23 6.649
ProSiteProfiles 178 200 23 4.886
Gene3D 194 286 93 2.1E-23
ProSiteProfiles 227 249 23 4.632
SMART 249 273 25 200.0
ProSiteProfiles 275 298 24 4.924
Gene3D 287 395 109 3.2E-29
SMART 297 329 33 140.0
SMART 297 321 25 42.0
ProSiteProfiles 323 346 24 5.309
SUPERFAMILY 361 692 332 1.73E-63
ProSiteProfiles 371 394 24 4.77
Gene3D 415 704 290 5.0E-88
SMART 417 441 25 29.0
ProSiteProfiles 419 441 23 6.926
Pfam 443 502 60 2.2E-8
ProSiteProfiles 443 465 23 5.225
ProSiteProfiles 467 490 24 5.325
SMART 489 513 25 56.0
ProSiteProfiles 491 513 23 5.887
SMART 513 539 27 320.0
ProSiteProfiles 515 538 24 4.532
SMART 537 560 24 140.0
ProSiteProfiles 539 562 24 4.986
SMART 561 585 25 160.0
ProSiteProfiles 563 585 23 4.793
SMART 585 606 22 680.0
SMART 586 609 24 230.0
Pfam 587 607 21 1.5
ProSiteProfiles 587 609 23 6.896
PRINTS 588 601 14 6.7E-6
ProSiteProfiles 611 634 24 4.555
Pfam 616 670 55 1.4E-6
PRINTS 634 647 14 6.7E-6
SMART 634 653 20 360.0
SMART 634 659 26 120.0
ProSiteProfiles 636 658 23 7.843
SMART 657 682 26 70.0
ProSiteProfiles 659 680 22 5.81
Phobius 727 748 22 -
TMHMM 729 748 20 -
Phobius 749 1114 366 -
SUPERFAMILY 764 1066 303 6.34E-73
Gene3D 771 873 103 4.8E-19
SMART 786 1069 284 1.7E-31
ProSiteProfiles 786 1073 288 37.616
Pfam 790 1064 275 1.4E-42
ProSitePatterns 792 815 24 -
Gene3D 874 1083 210 3.1E-59
ProSitePatterns 918 930 13 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0292300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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