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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0556600 |
| Transcript ID | LotjaGi3g1v0556600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; TAIR: AT1G72090.1 Methylthiotransferase; Swiss-Prot: sp|Q6P4Y0|CDKAL_XENTR Threonylcarbamoyladenosine tRNA methylthiotransferase; TrEMBL-Plants: tr|I1LNN6|I1LNN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0556600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:97447998..97457163) extracted from Lotus japonicus Gifu genome v1.2.
GTGAAATTGAAATTGATTTCTAGGGCGGAGGGTGGGTGTGTGCAGTGCAGAGTGCAGAGAAGGAGAATCGAGGTGAGGAG AGGAAATGGAGGACATTGAGGATATGCTGATCGGAACCACAACTGGTCACCCGGCAGGCTTTCGTTTGCCAGTAGCGGCA GTTGGTGTTGGCGTTGGAACGAAGAGGAATCAGCGTTGTTCACCTTGTTCTTCTGCAATCCCTGGCACTCAGACTATCTA CATGAAGACCTTCGGCTGCTCTCATAACCAGGCAAAGTTCTTTCTTTCAATTACATCATCTTAATCTTCATTCAGATTTC AGTTAGTTAGTTAGTTAATTACTGTTTGTTCTGATTCGAACATGAACAGAGTGACAGTGAATATATGGCTGGTCAGCTTT CGGCTTTCGGCTATTCATTGAGTGATAACCCCGACGAAGCCGATCTATGGCTCATCAACACGTAAGTCTTTTCATTGCTC TTGTTTAGTTAATTATTAATGCACATCACATGTATGTATGTATTTATTGTATATATAAGCCCCTTTCAATTCAAACAACC ATATTAGTAGTTCTCTTTGCTGTGAGGTTGAGGTAGAGGTAGCAATAGCATCCTTACTGCAGCCATATACTTATATACAT TTCAAATGAATACTCTGTTAATTAATCACTGCTCCAGTTGCACAGTCAAATCCCCAAGTCAATCTGCCATGGACACCATC ATAGCAAAAGGTAAATCTTCAAATAAACCACTAGTTGTTTCTGGCTGTGTACCTCAAGGAAGTCGAGATTTGAAAGAGCT CGACGGGATCAGCATAGTTGGAGTCCAGCAAATTCATCGTGTTGTTGAAGTTGTAGAGGAGACTTTAAAAGGTCATGAAG TGCGTCTTTTGACCCGTAAGACATTGCCAGCACTTGACCTTCCAAAGGTATGAATTTCGCCATTTTTAATTGCTCTTCTA TCTATGGAAATTTCTTCACTTACCTGAATATTATTATTTTACCATTCAGTTGTCGCATGGTAATGTTTTATGCTTCGGTA TAATGTATATCAGTTTGTTTTTTTTTTAAATAGTCAGGAGATGGATTAATTATTGTCCCTTTGTAACAGGTGAGAAAGAA CAAGTTTGTTGAGATTCTTCCAATTAATGTTGGTTGTTTAGGTGCGTGCACTTATTGCAAGACAAAGCATGCTCGGGGTC ACCTAGGGAGTTACACTATAGATAGCCTTGTACGTACTTTGATAGTGGCCTACATTATGTTTTATTTTTTTTACTATTTC AGTTTGCTCATATATGTATTATTCCTTAATGCAGGTTGGGCGTGTAAAATCTGTCATATCTGATGGAGTTAAAGAGATTT GGCTAAGCAGTGAAGACACTGGAGCTTATGGTAATTTCTAAAATTGGTTAGATTCCTTCAATTACTTTCACTTTTTCACA AATTTAAGATATTTGCAGACCTGAGCTTACGAAATTACCTTTTTAAGTGATTTATACATCCAAGCAATTAGGTTGTTTAA AATGTTTTAAAATTGAGATTTGGTTTTACATCTAGAGTTTCTTAGGTCATGATTTTTACAGGTCGTGACATTGGTGCCAA TCTTCCAAATTTATTGAATGCATTAGTAGCAGAACTACCACCTAATGCGAGCACTATGCTTCGTATCGGAATGACCAATC CTCCTTTTATCCTTGAGCACTTGAAAGAGATAGCAGAGATTTTGCGGCATCCATGTGTGTATTCTTTTTTGCATGTACCA GTTCAGTCTGGAAGTGATACTATTTTGAGTGTAAGTCCTGAAAATTATTGATAAGATTGTGGACAATAATGTGCTAACCA ATATATTTACTAATAATCGGAATGTCTCAGGCAATGAATCGGGAATATACTGTGAGTGAGTTCAGGACTGTTGTAGATAC CTTAACTGAGCTTGTGCCAGGGATGCAGATTGCCACCGATATAATATGTGGATTTCCTGGTTAGTGGATGGTCTTTCTTA CACATTTTGTTATATACTTTTTCACAACCTGTTTAATTCTATTTGCAATAAGTCTAGAGCACAACAACTGAAGTTATGAA TCATTTTACACGAAAAAATACCACTTTGTTCTAAACTTGAGAACTCTTATACACTGATTTAACAATAAATGACAAGATAA TTGATGGAATCTTATTATTGGGCTGTCATTTGTACACAGTAATGTGAAACAATATTCTCGTACTCGTGGAGATTATACTG TATATGATTAAAATGATTTCGAATTGATATAGATAATGTGGAAACTATAAAAGAAGTGCATGGATCTTAGTAATATTTGT TTCTTGGGCTTTTTCAGGTGAAACTGATGAGGATTTTTCACAAACTGTCAACCTCATCAAAGAGTACAAGTTCTCTCAAG TTCATATTTCACAATTTTATCCTCGACCAGGTATGTGACCTGACATAACTTCATATTGAAAATCATTACTTCATTTTCAT TTGAAGGATGAAATTGAAGTAGGTATTAAGCTACTAGGATATTTTAGAAGCAAGTTCTTAGGTTCACTACGCTCTTTGTG TGAACAATTTGTCTTCTTATTTATTGTTTTTTTCGTTTTCTGGGGGTAGTGAGGGGATGGATTTAGGTTACTTCATTATT TGTGCCTATGCTTAAAGGGTTAAGGTTGTTTTACATATGATCCTCTTAAATGCTACAGTGATAGCCCTGTGCACTGAAAT CTGAATCTGCCCTTTTTCTGAGATTTCTTTACTTGTGCCAACTCTTAACTAAAATTTTAATGGAGATGTTTCAATAAAAA AGTGCTGCCAATAATTTTAAGTTCACTAACAGTGTTAATAGATGCATTTTCTTATTTACCCCTTTTCTAGGTGCTATTGT ATGCTACTCCCTTGTTATAAAGGGCCACACAATGTCCATATCCTTTTGAATAATTACTGAGTTGCTTATCTGAAGTATTG TTTTTTTCTTGCAAAAAGTACTCTCGTAAACATTTTTTCTAATTATTATGAGCAAGAGCAAGCGAACAAAATGTGGACAT TCCTGTTTATGAACAGGGTTAGTCTATCTTAGGTGATTTTGTTTGATTAATCCCAAGTTCCCCCTTTAAACACTAATGTT ACATCCTACAATTTTTTTTCTTCAAATTTTATAATTTCTTATTTTTGAACTTATAAAACTATTTCATATTTCACGATATT TAATTTTTTTAATAGAATTAAGATTTAAGGTCTATGAAAATTGTCAAAATTATCAATTTGCTTCATTAAAAAATGAAGAA CGTAATTAGCTTGAAAAAAAACCTAAAGGGCCGAAATCTCCGAGTCTAAGCTCCTCTTTTGTTTGCTGTTTTTTTTTCTA TTTTAAAAAATTGAAAAAAGTTTTTCTTTTCTTTTTTCTTAACGTGTTTTCAAAAACTGTTTTTAGAAACAACTATTATT TTTCAGTTTTTATAACTAAAATCTTAAATTATTTGTTTTTGTTTTTAGTTTTCAAATTACAGTTTTTAAAACGTTGTATA ACATTTCATTCAAACAATTTATTGTTCTTTTGAAAAACTGATTTTAAAAATTATTTCTGAAAACTGTTTTTAAATTTAGA AAACTAAAACAGAAATCAAACAAGCCCTAAACCTGTGGGACCAAAAGTAATTTTTTTTTTAGAATATTACATACATTACT GGAAGGGGTTGGGGCTCTCTTTGAAAATTTGCATTCAGGTTTAATTTTGGGTGCTTAGAAAATCAGCCCATCTTGATCTA GGTTACTACCAGGCCTTAGCACTTGTGTACGATGCTTATACCTGTTTTATTCCTTAACATTCATTTTAAAATAATATTGC TTATCCCCAACAGACTAATAATGGGAAAAAATTGAATAGGGACACCTGCTGCAAGGATGAAAAAGGTTCCAAGTAATGTG GTGAAGAGAAGAAGCCGTGAACTGACCAATGTTTTTGAAGCCTTCACACCATACTCTGGGATGGAAGGCAAAGTGGAAAG AATCTGGATTACTGATGTTGCATCTGATGGAGTTCACTTGGTAAGGAAGTATCGTAGATCTTGAATCATGATTTGCTTTT TGGTTAGTCGAAATTTAGTCCATTAAAATTGTGAGACGTCACAACTCACATGTTACCAAAACATATATGTGATTATGTGG CTGAAACCCTGTAATTGCCATGAACCCACCCAAGTGCCTAAAATAGAAAGCTAATCTGTTATTTGTTTCTAAACTTTTTT AGTCTTCATAATCGTGCTGTGTGTTTCAAACTACAATATTTGAGACTTAGGTGGTTTAACTACGAAAGGTGTCATTTATT ATACTTAGGATCTTTAGCACATCACAGGTGTTGGAGAAGGGCTACTCACATAGCATAGCCATGGGCTCAGGGCCTCTTGT CGATAAAAAAGAGTGTTAGAAGTCCCACATTAGCTAGAGATATGGCCTAGATAGCCTTTGTAAAGGATATAGCAACCCTC AACTCTTGAGCTAGTTTTTGAATTGTGTTAGGCCTCCTAAATTATAAAGAGGGTATGATGGGAAGAAAAGTTTCTTTTTC TTTTTTTACTGTGCCTACAAATGTGTTGCAAACTTGCTATGATAAAATGTGAATTATTTGAAGCTGTGAAGCAGTACACT GAACTTGTGACTTCTATGTATCATTATATATTTATCGGTGATCATCTAATTAATTTGTTCTTCAATGCTGAAGGTTGGTC ATACGAAGGGATATATACAAGTTCTTGTAATTGCTCCAGACTATATGCTGGGAACTTCAGCTATGGTTAAAATAACATCT GTTGGAAGGTGGTCAGTTTTTGGGGAAGTAATTGAGATGGTCAACCATGTAAGTGATGATAAAGTCGTAAACAAGCAGGA TCCCAATCAGGACATGCAAGAGCCAGAATCTTGTGCTTGTGGAAATGATATTGACAGCTGCTGTGGTCAGAGTAATCTCG ATAAGAATGATCAGTCAAGAGGCCCTGCAGAGCCACAGAGTCAAAACAGTAGAAATTTCATCGGATGGATACTGAGGAAG CGGAAGCATCTGCACAAAGGGGTAGAGAGTGAACTTGCGTCCGGATCTGTTCAAAATCAAGAAGGGAGCATGAAAAAGTT GGACTTTGTTGACAAGGCTCTTTTGAGCGGAATATCTATCAGCATCTTTATGATTATTGCTATAGTAGCTGCTCTTACGT TTAGGGTTATTTGGTCCCAGTAAAAGGCTATTAGTTTCTAATTTTTCCTGAATCAAATTGTCATTCTAAAGTTTTGACTT ACAAATTGGTTAGATTTTATCTAGTGTTTGCACATGTATTCTTCTGCAAAATCCCACCCACATTGCTTTAGATTTTGTGG TAGTTGTATTGATATGGTATGGTTCATAGAAAATCCATTTTGGACATGTTTTGTGAAGGCAAACGAATAGCTTCTTTTGC AATAGTTGACAGATGTGGTCGCCAATAATAGGAAGTACATTTCATGATTTGATAAAACTATTACGAGTTATTTTTATTGC TGAATCTGAGGGTTTGGGATATACATATAATGTAAGTGGAGGGGGACTATCACATCTTTGCTACACCCTCTTTCGTTTGG GTGTAATGGTGCAGGTCTGTTTATTCATATATATAGAATTATTTGTGTGCACAAAAATTAAACATTAGGCAGGGGAAGGG AGAGGTCCAAGCCAGGCCTCATAGCAGCATGTCTGATTTAGAAGGCAATCTCTTGAAGAAATTAACCGGCACTGATGGCA TCTTGCTCCTAAACCGAGGATGACGCAGCATGTAGAGGCCTACTAGAATTGCTACTACCTGAAAGGGAGTAATGTAAATG AACACAGCCCAGATCAGTGAGAAGATGATGAAGATAGATGTAGCCCTTGAGTCTCTCCAACCTAATATTGCTTGAGCTCT TTCTCCCTGAGTTGCCAAATCTCCAACCACAGTCTGAACTCTACCTGCCACACTCCGCATTCTGTCGTACCTCATTCTCA CAATATCTGCAGGTCTTGTAGTTGGAAAAGTGTCAAATTCCTCGTCCAATTCATCTGGGTGGGCGGTTTCTGCTTGTGAA AGCCTAGCATCCATGTGGGGCGGATGCCTTGGCCTGAACCGGTAATTCCAAATCCCAATTACAAACAGGTAAAGAAAAAT AGTGGGCAATATCAGTTCTGGGTAGCAAACCAAGATCAAGAATAAGACATGAACAAGGCAGGTTGTCACTGGGTTTCTCC AAGTGCAGATGTTGTCAAACCATTTACACACAGCTGTAACACCTGAGAGGAGTGACATTATCCGGTGAAAATTGGCTTTG CTTCTCCTCAGACTCCACATATGGTAATCCACATCAAGCATGTACTCAACTGCTTCTTGTCTAAGCGGTGGCTCGGCTCT TGACAACCGTGCTGCCACAATCTGCATGGCCTGGTGGCGGAGCCAATCAATGTGCCTAACAGGTATGGGTTGGGCATAAT GCATTTTGGGAAGCAAAGGCCTTCCATACTGTGCTACCATGTTAACCCAAGCTGTGCAGGTGAATTTCACTGCCAAATGA AGCTCTCCATTCTTCTTCAGGCCATTGGGTTGGAGAACCAGTAGAGGATAATAATGAGTATACACTCTATCAGTTTCAAG AGTTGATAACCGGATTCTCACCTTTCCAATCCTCTGATCTTTATGGTCACCGTTCCCATTGATGTGGTGATTGTCAAAAA CCCCGATTGTGATCACAGTACATGGATCATGCACTTCCCATGTATACTGCTCATTCCATCTAGGGGATAGAGTGTCAAGC AGAGTTCTGGTTCGAACCCATTTGTTGCCATACTTGGCCACACAGTATGCATCAGTAGTCCTACCTTCCTTGCCCTTCAT AGGAAGCAAATTCCGGGCACTCAGTATCCCAAGTTCGAGAATTCCAATGTTTTTCTTCCTCAAATGTTTGGAGGATGGCT GGAGATCACTGCTAAAATGTGTGGACTCATCAAGCACGTGATACCCTGCCTCGAGACAGATTCTGAGGTGAATCTTGCTT GAGAATTTCTCCTTCTTTTTCTCTGTTTCTTCCTCACCAACCGCACTAGGCCTGTGCAAATTGTACCAACGAGAATCAGG GGGCTTGCTCTCATGCCTGGGAGGAACACTTCTGACTGATATAATCTCCCTTCCCAAGATCTCAACATTGTTAGGACCAG GACCTACTCTGTCCTCAACTGTCACAACTATAAAATCCTCAAAAGGTTCAGCTGCCACAAACATGAGCTCATCGTTCCAA ACTGGGTTAATGACTTTCATTTGAGAAGTCCTTGTGTATCTCATCTGATTTCCTAGTGTTACTCTAACACAAGCATCCGG AGCTCTTCCTTTGTTGGAAGGGACAAGATCTTGAGCTTCAATCACTTGAACTCTAAGATAGTAAAGCTTGGGAGTGAAAT ATACCTTTGAACGGGTATTTGCAAGGTTTGAGTGACTAACGTTATGAGCATCAGAGTGCCAGGCCTCTGGAAATGACTCA TCAGCTTGTGTTCCCATCCAAACTGCAAGCATGATTTCTCCATGATGTATCTTTTGCCCTTTCTTGTCCTCCAATCTGTA CCATTGAGGAGCCAGCGGGCTATCTGGGGGTACCCGAAGAGGAACCTCAGTGAGATCAAACATAATTCTACCCACAAAAT CATCTTTACCAATGTCCTTATCCTTCACAGTCACTTCAAGCAAATTTGATTGCAATCTCTCCTTTGAGAAGGCAAAGATT TGCTTCCAAACTGGATTCTGATTCTTATCCAAGTGCTTTGTAACCCCTTTGTAGTTACCAAGCTTCACTTCCACATAAGG GTCAAGGCTTCCTGAGATATCCATCACTGGAAGATCTCTTGCCTTCACCACATTCACGTACAAGTAATGCATCTGTTCCA CCATATCATACGTGGTTGACATCTTGTTCCCTCCTCTATAGCGCAAACGAGCTGCAAGGGGTGGACTTGTCTCCACCAAT CCATACTCTGGGTTTTGCTTCGGGATCTGCATTAACATCACATTGGGTGGCCCTGCTTTTGCAAAATCAGCTCTCATTTC CACTGTTGGTGCCGCTTGAGGAGGCCTTGCTGCAGGAGCTGGAGCAGCTTTCTCGGTCCCAATGGAGTGAAAAGTTCTCA CTTCCTTTTCTTTCTTCTTGTTCTTGTGCTTCTTATTTTTCCTCTCAATATCACCAACCATGCTTTCCTCATCTACTATG TTAGTGTTTATTTCTTGCAAGGGAGTCTCCTCCTCATAAGGATAAGGATGAGGCTCAAATTCTTCACTGGCTTGTGGTTG TAGTTGTGGAGGAGGAGAAGGAGCAGTATAAGCAGAAGGATCATGAACAGCATAAATTCTAAGAGCAATATCTCCTTTGA TATTTGAAAATAGACCCCTTTTGTCAAGTGGGTAGCGTTCGATAGTAGCTTGAGACTCAGAGAAAGGGACAGAATCACCT GAAATTCTCACCCTTCCAAGGAAGTTCTTGTGGTTACCTGGTTTTTGATCATTGTAATTGTATACAACTACTTCAATTGT CTGGTGAGGAAGATCTCTCGGGTTATTGATGTTGAAGACAAACTTCTCATTCCAATAAGGATTGAGGTCCTTGTGTTTGG TTTGAGTCCTCTGCTGTTGCTCATCAAAGTCTACCTCCACAAAGGGGCTTGCTGACCCTTCTCCATCTTTTGGCATAAGG TCGCTGGCATCAAGTACTTCCACCACCAGCTTGTTCATGATGGTATTAATATTATGATGCAGCAAGTTAAAACCAGGTTT TGAAATCCTAGATATGCGTGTGTAGTGTTCAATTATGATCTACAAGGAAAGAAAGAAAGAAAGAAAGAAAAGTTGGCAGT GAAGGATAGAGTTGAAGTGAAAAAGATGAGAGAGAGGACCAGAAGGGTAGGCGGTAGTGGTGATGATATGTTCATTAGAA ACATTTGTTGGAGAGAGAAAGTGAGGAGATATGTGCATTGCTGTTTGGTGGCCCTTTGATTGATTCATATGGCTTTGATA GGTTTAGGAGGATATTCTAGATCTCTAGTTGCTACTTTCCTGTTTTCCATGTCTGTTTGCTGTGGTGTGGTAAGTATTGG GTGAAAAAGTACATTCACATGTTCATCAGTTTAGTTTACATTGTCA
CDS sequence (LotjaGi3g1v0556600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGGTCAGCTTTCGGCTTTCGGCTATTCATTGAGTGATAACCCCGACGAAGCCGATCTATGGCTCATCAACACTTG CACAGTCAAATCCCCAAGTCAATCTGCCATGGACACCATCATAGCAAAAGGTAAATCTTCAAATAAACCACTAGTTGTTT CTGGCTGTGTACCTCAAGGAAGTCGAGATTTGAAAGAGCTCGACGGGATCAGCATAGTTGGAGTCCAGCAAATTCATCGT GTTGTTGAAGTTGTAGAGGAGACTTTAAAAGGTCATGAAGTGCGTCTTTTGACCCGTAAGACATTGCCAGCACTTGACCT TCCAAAGGTGAGAAAGAACAAGTTTGTTGAGATTCTTCCAATTAATGTTGGTTGTTTAGGTGCGTGCACTTATTGCAAGA CAAAGCATGCTCGGGGTCACCTAGGGAGTTACACTATAGATAGCCTTGTTGGGCGTGTAAAATCTGTCATATCTGATGGA GTTAAAGAGATTTGGCTAAGCAGTGAAGACACTGGAGCTTATGGTCGTGACATTGGTGCCAATCTTCCAAATTTATTGAA TGCATTAGTAGCAGAACTACCACCTAATGCGAGCACTATGCTTCGTATCGGAATGACCAATCCTCCTTTTATCCTTGAGC ACTTGAAAGAGATAGCAGAGATTTTGCGGCATCCATGTGTGTATTCTTTTTTGCATGTACCAGTTCAGTCTGGAAGTGAT ACTATTTTGAGTGCAATGAATCGGGAATATACTGTGAGTGAGTTCAGGACTGTTGTAGATACCTTAACTGAGCTTGTGCC AGGGATGCAGATTGCCACCGATATAATATGTGGATTTCCTGGTGAAACTGATGAGGATTTTTCACAAACTGTCAACCTCA TCAAAGAGTACAAGTTCTCTCAAGTTCATATTTCACAATTTTATCCTCGACCAGGGACACCTGCTGCAAGGATGAAAAAG GTTCCAAGTAATGTGGTGAAGAGAAGAAGCCGTGAACTGACCAATGTTTTTGAAGCCTTCACACCATACTCTGGGATGGA AGGCAAAGTGGAAAGAATCTGGATTACTGATGTTGCATCTGATGGAGTTCACTTGGTTGGTCATACGAAGGGATATATAC AAGTTCTTGTAATTGCTCCAGACTATATGCTGGGAACTTCAGCTATGGTTAAAATAACATCTGTTGGAAGGTGGTCAGTT TTTGGGGAAGTAATTGAGATGGTCAACCATGTAAGTGATGATAAAGTCGTAAACAAGCAGGATCCCAATCAGGACATGCA AGAGCCAGAATCTTGTGCTTGTGGAAATGATATTGACAGCTGCTGTGGTCAGAGTAATCTCGATAAGAATGATCAGTCAA GAGGCCCTGCAGAGCCACAGAGTCAAAACAGTAGAAATTTCATCGGATGGATACTGAGGAAGCGGAAGCATCTGCACAAA GGGGTAGAGAGTGAACTTGCGTCCGGATCTGTTCAAAATCAAGAAGGGAGCATGAAAAAGTTGGACTTTGTTGACAAGGC TCTTTTGAGCGGAATATCTATCAGCATCTTTATGATTATTGCTATAGTAGCTGCTCTTACGTTTAGGGTTATTTGGTCCC AGTAA
Protein sequence (LotjaGi3g1v0556600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGQLSAFGYSLSDNPDEADLWLINTCTVKSPSQSAMDTIIAKGKSSNKPLVVSGCVPQGSRDLKELDGISIVGVQQIHR VVEVVEETLKGHEVRLLTRKTLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSVISDG VKEIWLSSEDTGAYGRDIGANLPNLLNALVAELPPNASTMLRIGMTNPPFILEHLKEIAEILRHPCVYSFLHVPVQSGSD TILSAMNREYTVSEFRTVVDTLTELVPGMQIATDIICGFPGETDEDFSQTVNLIKEYKFSQVHISQFYPRPGTPAARMKK VPSNVVKRRSRELTNVFEAFTPYSGMEGKVERIWITDVASDGVHLVGHTKGYIQVLVIAPDYMLGTSAMVKITSVGRWSV FGEVIEMVNHVSDDKVVNKQDPNQDMQEPESCACGNDIDSCCGQSNLDKNDQSRGPAEPQSQNSRNFIGWILRKRKHLHK GVESELASGSVQNQEGSMKKLDFVDKALLSGISISIFMIIAIVAALTFRVIWSQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 104 | 104 | 7.8E-12 | ||
| Pfam | 1 | 62 | 62 | 2.8E-9 | ||
| ProSiteProfiles | 1 | 90 | 90 | 21.193 | ||
| TIGRFAM | 1 | 405 | 405 | 3.9E-126 | ||
| TIGRFAM | 1 | 400 | 400 | 3.4E-90 | ||
| PANTHER | 1 | 407 | 407 | 5.3E-217 | – | |
| Phobius | 1 | 506 | 506 | - | – | |
| PANTHER | 1 | 407 | 407 | 5.3E-217 | – | |
| SFLD | 63 | 329 | 267 | 6.6E-27 | ||
| SFLD | 63 | 329 | 267 | 6.6E-27 | – | |
| SUPERFAMILY | 105 | 339 | 235 | 2.35E-44 | – | |
| Gene3D | 113 | 343 | 231 | 7.5E-72 | ||
| SMART | 115 | 339 | 225 | 1.1E-39 | ||
| CDD | 119 | 323 | 205 | 8.56574E-7 | – | |
| ProSitePatterns | 119 | 139 | 21 | - | ||
| Pfam | 123 | 294 | 172 | 5.6E-19 | ||
| ProSiteProfiles | 344 | 406 | 63 | 10.324 | ||
| Phobius | 507 | 532 | 26 | - | – | |
| TMHMM | 510 | 532 | 23 | - | – | |
| Phobius | 533 | 534 | 2 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | TRNA modification | The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically. | ||
| Molecular function | Transferase activity | Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2. | ||
| Molecular function | Methylthiotransferase activity | Catalysis of the addition of a methylthioether group (-SCH3) to a nucleic acid or protein acceptor. | ||
| Molecular function | N6-threonylcarbomyladenosine methylthiotransferase activity | Catalysis of the methylthiolation (-SCH3 addition) at the C2 of the adenosine ring of N6-threonylcarbomyladenosine (t6A) in tRNA, to form 2-methylthio-N6-threonylcarbamoyladenosine (ms2t6A). | ||
| Biological process | TRNA methylthiolation | The addition of a methylthioether group (-SCH3) to a nucleotide in a tRNA molecule. | ||
| Molecular function | Iron-sulfur cluster binding | Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms. | ||
| Molecular function | 4 iron, 4 sulfur cluster binding | Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. |
Expression pattern of LotjaGi3g1v0556600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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