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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0556600 |
| Transcript ID | LotjaGi3g1v0556600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; TAIR: AT1G72090.1 Methylthiotransferase; Swiss-Prot: sp|Q6NS26|CDKAL_XENLA Threonylcarbamoyladenosine tRNA methylthiotransferase; TrEMBL-Plants: tr|I1LNN6|I1LNN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0556600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:97448097..97457171) extracted from Lotus japonicus Gifu genome v1.2.
GTAAAATAGTGAAATTGAAATTGATTTCTAGGGCGGAGGGTGGGTGTGTGCAGTGCAGAGTGCAGAGAAGGAGAATCGAG GTGAGGAGAGGAAATGGAGGACATTGAGGATATGCTGATCGGAACCACAACTGGTCACCCGGCAGGCTTTCGTTTGCCAG TAGCGGCAGTTGGTGTTGGCGTTGGAACGAAGAGGAATCAGCGTTGTTCACCTTGTTCTTCTGCAATCCCTGGCACTCAG ACTATCTACATGAAGACCTTCGGCTGCTCTCATAACCAGGCAAAGTTCTTTCTTTCAATTACATCATCTTAATCTTCATT CAGATTTCAGTTAGTTAGTTAGTTAATTACTGTTTGTTCTGATTCGAACATGAACAGAGTGACAGTGAATATATGGCTGG TCAGCTTTCGGCTTTCGGCTATTCATTGAGTGATAACCCCGACGAAGCCGATCTATGGCTCATCAACACGTAAGTCTTTT CATTGCTCTTGTTTAGTTAATTATTAATGCACATCACATGTATGTATGTATTTATTGTATATATAAGCCCCTTTCAATTC AAACAACCATATTAGTAGTTCTCTTTGCTGTGAGGTTGAGGTAGAGGTAGCAATAGCATCCTTACTGCAGCCATATACTT ATATACATTTCAAATGAATACTCTGTTAATTAATCACTGCTCCAGTTGCACAGTCAAATCCCCAAGTCAATCTGCCATGG ACACCATCATAGCAAAAGGTAAATCTTCAAATAAACCACTAGTTGTTTCTGGCTGTGTACCTCAAGGAAGTCGAGATTTG AAAGAGCTCGACGGGATCAGCATAGTTGGAGTCCAGCAAATTCATCGTGTTGTTGAAGTTGTAGAGGAGACTTTAAAAGG TCATGAAGTGCGTCTTTTGACCCGTAAGACATTGCCAGCACTTGACCTTCCAAAGGTATGAATTTCGCCATTTTTAATTG CTCTTCTATCTATGGAAATTTCTTCACTTACCTGAATATTATTATTTTACCATTCAGTTGTCGCATGGTAATGTTTTATG CTTCGGTATAATGTATATCAGTTTGTTTTTTTTTTAAATAGTCAGGAGATGGATTAATTATTGTCCCTTTGTAACAGGTG AGAAAGAACAAGTTTGTTGAGATTCTTCCAATTAATGTTGGTTGTTTAGGTGCGTGCACTTATTGCAAGACAAAGCATGC TCGGGGTCACCTAGGGAGTTACACTATAGATAGCCTTGTACGTACTTTGATAGTGGCCTACATTATGTTTTATTTTTTTT ACTATTTCAGTTTGCTCATATATGTATTATTCCTTAATGCAGGTTGGGCGTGTAAAATCTGTCATATCTGATGGAGTTAA AGAGATTTGGCTAAGCAGTGAAGACACTGGAGCTTATGGTAATTTCTAAAATTGGTTAGATTCCTTCAATTACTTTCACT TTTTCACAAATTTAAGATATTTGCAGACCTGAGCTTACGAAATTACCTTTTTAAGTGATTTATACATCCAAGCAATTAGG TTGTTTAAAATGTTTTAAAATTGAGATTTGGTTTTACATCTAGAGTTTCTTAGGTCATGATTTTTACAGGTCGTGACATT GGTGCCAATCTTCCAAATTTATTGAATGCATTAGTAGCAGAACTACCACCTAATGCGAGCACTATGCTTCGTATCGGAAT GACCAATCCTCCTTTTATCCTTGAGCACTTGAAAGAGATAGCAGAGATTTTGCGGCATCCATGTGTGTATTCTTTTTTGC ATGTACCAGTTCAGTCTGGAAGTGATACTATTTTGAGTGTAAGTCCTGAAAATTATTGATAAGATTGTGGACAATAATGT GCTAACCAATATATTTACTAATAATCGGAATGTCTCAGGCAATGAATCGGGAATATACTGTGAGTGAGTTCAGGACTGTT GTAGATACCTTAACTGAGCTTGTGCCAGGGATGCAGATTGCCACCGATATAATATGTGGATTTCCTGGTTAGTGGATGGT CTTTCTTACACATTTTGTTATATACTTTTTCACAACCTGTTTAATTCTATTTGCAATAAGTCTAGAGCACAACAACTGAA GTTATGAATCATTTTACACGAAAAAATACCACTTTGTTCTAAACTTGAGAACTCTTATACACTGATTTAACAATAAATGA CAAGATAATTGATGGAATCTTATTATTGGGCTGTCATTTGTACACAGTAATGTGAAACAATATTCTCGTACTCGTGGAGA TTATACTGTATATGATTAAAATGATTTCGAATTGATATAGATAATGTGGAAACTATAAAAGAAGTGCATGGATCTTAGTA ATATTTGTTTCTTGGGCTTTTTCAGGTGAAACTGATGAGGATTTTTCACAAACTGTCAACCTCATCAAAGAGTACAAGTT CTCTCAAGTTCATATTTCACAATTTTATCCTCGACCAGGTATGTGACCTGACATAACTTCATATTGAAAATCATTACTTC ATTTTCATTTGAAGGATGAAATTGAAGTAGGTATTAAGCTACTAGGATATTTTAGAAGCAAGTTCTTAGGTTCACTACGC TCTTTGTGTGAACAATTTGTCTTCTTATTTATTGTTTTTTTCGTTTTCTGGGGGTAGTGAGGGGATGGATTTAGGTTACT TCATTATTTGTGCCTATGCTTAAAGGGTTAAGGTTGTTTTACATATGATCCTCTTAAATGCTACAGTGATAGCCCTGTGC ACTGAAATCTGAATCTGCCCTTTTTCTGAGATTTCTTTACTTGTGCCAACTCTTAACTAAAATTTTAATGGAGATGTTTC AATAAAAAAGTGCTGCCAATAATTTTAAGTTCACTAACAGTGTTAATAGATGCATTTTCTTATTTACCCCTTTTCTAGGT GCTATTGTATGCTACTCCCTTGTTATAAAGGGCCACACAATGTCCATATCCTTTTGAATAATTACTGAGTTGCTTATCTG AAGTATTGTTTTTTTCTTGCAAAAAGTACTCTCGTAAACATTTTTTCTAATTATTATGAGCAAGAGCAAGCGAACAAAAT GTGGACATTCCTGTTTATGAACAGGGTTAGTCTATCTTAGGTGATTTTGTTTGATTAATCCCAAGTTCCCCCTTTAAACA CTAATGTTACATCCTACAATTTTTTTTCTTCAAATTTTATAATTTCTTATTTTTGAACTTATAAAACTATTTCATATTTC ACGATATTTAATTTTTTTAATAGAATTAAGATTTAAGGTCTATGAAAATTGTCAAAATTATCAATTTGCTTCATTAAAAA ATGAAGAACGTAATTAGCTTGAAAAAAAACCTAAAGGGCCGAAATCTCCGAGTCTAAGCTCCTCTTTTGTTTGCTGTTTT TTTTTCTATTTTAAAAAATTGAAAAAAGTTTTTCTTTTCTTTTTTCTTAACGTGTTTTCAAAAACTGTTTTTAGAAACAA CTATTATTTTTCAGTTTTTATAACTAAAATCTTAAATTATTTGTTTTTGTTTTTAGTTTTCAAATTACAGTTTTTAAAAC GTTGTATAACATTTCATTCAAACAATTTATTGTTCTTTTGAAAAACTGATTTTAAAAATTATTTCTGAAAACTGTTTTTA AATTTAGAAAACTAAAACAGAAATCAAACAAGCCCTAAACCTGTGGGACCAAAAGTAATTTTTTTTTTAGAATATTACAT ACATTACTGGAAGGGGTTGGGGCTCTCTTTGAAAATTTGCATTCAGGTTTAATTTTGGGTGCTTAGAAAATCAGCCCATC TTGATCTAGGTTACTACCAGGCCTTAGCACTTGTGTACGATGCTTATACCTGTTTTATTCCTTAACATTCATTTTAAAAT AATATTGCTTATCCCCAACAGACTAATAATGGGAAAAAATTGAATAGGGACACCTGCTGCAAGGATGAAAAAGGTTCCAA GTAATGTGGTGAAGAGAAGAAGCCGTGAACTGACCAATGTTTTTGAAGCCTTCACACCATACTCTGGGATGGAAGGCAAA GTGGAAAGAATCTGGATTACTGATGTTGCATCTGATGGAGTTCACTTGGTAAGGAAGTATCGTAGATCTTGAATCATGAT TTGCTTTTTGGTTAGTCGAAATTTAGTCCATTAAAATTGTGAGACGTCACAACTCACATGTTACCAAAACATATATGTGA TTATGTGGCTGAAACCCTGTAATTGCCATGAACCCACCCAAGTGCCTAAAATAGAAAGCTAATCTGTTATTTGTTTCTAA ACTTTTTTAGTCTTCATAATCGTGCTGTGTGTTTCAAACTACAATATTTGAGACTTAGGTGGTTTAACTACGAAAGGTGT CATTTATTATACTTAGGATCTTTAGCACATCACAGGTGTTGGAGAAGGGCTACTCACATAGCATAGCCATGGGCTCAGGG CCTCTTGTCGATAAAAAAGAGTGTTAGAAGTCCCACATTAGCTAGAGATATGGCCTAGATAGCCTTTGTAAAGGATATAG CAACCCTCAACTCTTGAGCTAGTTTTTGAATTGTGTTAGGCCTCCTAAATTATAAAGAGGGTATGATGGGAAGAAAAGTT TCTTTTTCTTTTTTTACTGTGCCTACAAATGTGTTGCAAACTTGCTATGATAAAATGTGAATTATTTGAAGCTGTGAAGC AGTACACTGAACTTGTGACTTCTATGTATCATTATATATTTATCGGTGATCATCTAATTAATTTGTTCTTCAATGCTGAA GGTTGGTCATACGAAGGGATATATACAAGTTCTTGTAATTGCTCCAGACTATATGCTGGGAACTTCAGCTATGGTTAAAA TAACATCTGTTGGAAGGTGGTCAGTTTTTGGGGAAGTAATTGAGATGGTCAACCATGTAAGTGATGATAAAGTCGTAAAC AAGCAGGATCCCAATCAGGACATGCAAGAGCCAGAATCTTGTGCTTGTGGAAATGATATTGACAGCTGCTGTGGTCAGAG TAATCTCGATAAGAATGATCAGTCAAGAGGCCCTGCAGAGCCACAGAGTCAAAACAGTAGAAATTTCATCGGATGGATAC TGAGGAAGCGGAAGCATCTGCACAAAGGGGTAGAGAGTGAACTTGCGTCCGGATCTGTTCAAAATCAAGAAGGGAGCATG AAAAAGTTGGACTTTGTTGACAAGGCTCTTTTGAGCGGAATATCTATCAGCATCTTTATGATTATTGCTATAGTAGCTGC TCTTACGTTTAGGGTTATTTGGTCCCAGTAAAAGGCTATTAGTTTCTAATTTTTCCTGAATCAAATTGTCATTCTAAAGT TTTGACTTACAAATTGGTTAGATTTTATCTAGTGTTTGCACATGTATTCTTCTGCAAAATCCCACCCACATTGCTTTAGA TTTTGTGGTAGTTGTATTGATATGGTATGGTTCATAGAAAATCCATTTTGGACATGTTTTGTGAAGGCAAACGAATAGCT TCTTTTGCAATAGTTGACAGATGTGGTCGCCAATAATAGGAAGTACATTTCATGATTTGATAAAACTATTACGAGTTATT TTTATTGCTGAATCTGAGGGTTTGGGATATACATATAATGTAAGTGGAGGGGGACTATCACATCTTTGCTACACCCTCTT TCGTTTGGGTGTAATGGTGCAGGTCTGTTTATTCATATATATAGAATTATTTGTGTGCACAAAAATTAAACATTAGGCAG GGGAAGGGAGAGGTCCAAGCCAGGCCTCATAGCAGCATGTCTGATTTAGAAGGCAATCTCTTGAAGAAATTAACCGGCAC TGATGGCATCTTGCTCCTAAACCGAGGATGACGCAGCATGTAGAGGCCTACTAGAATTGCTACTACCTGAAAGGGAGTAA TGTAAATGAACACAGCCCAGATCAGTGAGAAGATGATGAAGATAGATGTAGCCCTTGAGTCTCTCCAACCTAATATTGCT TGAGCTCTTTCTCCCTGAGTTGCCAAATCTCCAACCACAGTCTGAACTCTACCTGCCACACTCCGCATTCTGTCGTACCT CATTCTCACAATATCTGCAGGTCTTGTAGTTGGAAAAGTGTCAAATTCCTCGTCCAATTCATCTGGGTGGGCGGTTTCTG CTTGTGAAAGCCTAGCATCCATGTGGGGCGGATGCCTTGGCCTGAACCGGTAATTCCAAATCCCAATTACAAACAGGTAA AGAAAAATAGTGGGCAATATCAGTTCTGGGTAGCAAACCAAGATCAAGAATAAGACATGAACAAGGCAGGTTGTCACTGG GTTTCTCCAAGTGCAGATGTTGTCAAACCATTTACACACAGCTGTAACACCTGAGAGGAGTGACATTATCCGGTGAAAAT TGGCTTTGCTTCTCCTCAGACTCCACATATGGTAATCCACATCAAGCATGTACTCAACTGCTTCTTGTCTAAGCGGTGGC TCGGCTCTTGACAACCGTGCTGCCACAATCTGCATGGCCTGGTGGCGGAGCCAATCAATGTGCCTAACAGGTATGGGTTG GGCATAATGCATTTTGGGAAGCAAAGGCCTTCCATACTGTGCTACCATGTTAACCCAAGCTGTGCAGGTGAATTTCACTG CCAAATGAAGCTCTCCATTCTTCTTCAGGCCATTGGGTTGGAGAACCAGTAGAGGATAATAATGAGTATACACTCTATCA GTTTCAAGAGTTGATAACCGGATTCTCACCTTTCCAATCCTCTGATCTTTATGGTCACCGTTCCCATTGATGTGGTGATT GTCAAAAACCCCGATTGTGATCACAGTACATGGATCATGCACTTCCCATGTATACTGCTCATTCCATCTAGGGGATAGAG TGTCAAGCAGAGTTCTGGTTCGAACCCATTTGTTGCCATACTTGGCCACACAGTATGCATCAGTAGTCCTACCTTCCTTG CCCTTCATAGGAAGCAAATTCCGGGCACTCAGTATCCCAAGTTCGAGAATTCCAATGTTTTTCTTCCTCAAATGTTTGGA GGATGGCTGGAGATCACTGCTAAAATGTGTGGACTCATCAAGCACGTGATACCCTGCCTCGAGACAGATTCTGAGGTGAA TCTTGCTTGAGAATTTCTCCTTCTTTTTCTCTGTTTCTTCCTCACCAACCGCACTAGGCCTGTGCAAATTGTACCAACGA GAATCAGGGGGCTTGCTCTCATGCCTGGGAGGAACACTTCTGACTGATATAATCTCCCTTCCCAAGATCTCAACATTGTT AGGACCAGGACCTACTCTGTCCTCAACTGTCACAACTATAAAATCCTCAAAAGGTTCAGCTGCCACAAACATGAGCTCAT CGTTCCAAACTGGGTTAATGACTTTCATTTGAGAAGTCCTTGTGTATCTCATCTGATTTCCTAGTGTTACTCTAACACAA GCATCCGGAGCTCTTCCTTTGTTGGAAGGGACAAGATCTTGAGCTTCAATCACTTGAACTCTAAGATAGTAAAGCTTGGG AGTGAAATATACCTTTGAACGGGTATTTGCAAGGTTTGAGTGACTAACGTTATGAGCATCAGAGTGCCAGGCCTCTGGAA ATGACTCATCAGCTTGTGTTCCCATCCAAACTGCAAGCATGATTTCTCCATGATGTATCTTTTGCCCTTTCTTGTCCTCC AATCTGTACCATTGAGGAGCCAGCGGGCTATCTGGGGGTACCCGAAGAGGAACCTCAGTGAGATCAAACATAATTCTACC CACAAAATCATCTTTACCAATGTCCTTATCCTTCACAGTCACTTCAAGCAAATTTGATTGCAATCTCTCCTTTGAGAAGG CAAAGATTTGCTTCCAAACTGGATTCTGATTCTTATCCAAGTGCTTTGTAACCCCTTTGTAGTTACCAAGCTTCACTTCC ACATAAGGGTCAAGGCTTCCTGAGATATCCATCACTGGAAGATCTCTTGCCTTCACCACATTCACGTACAAGTAATGCAT CTGTTCCACCATATCATACGTGGTTGACATCTTGTTCCCTCCTCTATAGCGCAAACGAGCTGCAAGGGGTGGACTTGTCT CCACCAATCCATACTCTGGGTTTTGCTTCGGGATCTGCATTAACATCACATTGGGTGGCCCTGCTTTTGCAAAATCAGCT CTCATTTCCACTGTTGGTGCCGCTTGAGGAGGCCTTGCTGCAGGAGCTGGAGCAGCTTTCTCGGTCCCAATGGAGTGAAA AGTTCTCACTTCCTTTTCTTTCTTCTTGTTCTTGTGCTTCTTATTTTTCCTCTCAATATCACCAACCATGCTTTCCTCAT CTACTATGTTAGTGTTTATTTCTTGCAAGGGAGTCTCCTCCTCATAAGGATAAGGATGAGGCTCAAATTCTTCACTGGCT TGTGGTTGTAGTTGTGGAGGAGGAGAAGGAGCAGTATAAGCAGAAGGATCATGAACAGCATAAATTCTAAGAGCAATATC TCCTTTGATATTTGAAAATAGACCCCTTTTGTCAAGTGGGTAGCGTTCGATAGTAGCTTGAGACTCAGAGAAAGGGACAG AATCACCTGAAATTCTCACCCTTCCAAGGAAGTTCTTGTGGTTACCTGGTTTTTGATCATTGTAATTGTATACAACTACT TCAATTGTCTGGTGAGGAAGATCTCTCGGGTTATTGATGTTGAAGACAAACTTCTCATTCCAATAAGGATTGAGGTCCTT GTGTTTGGTTTGAGTCCTCTGCTGTTGCTCATCAAAGTCTACCTCCACAAAGGGGCTTGCTGACCCTTCTCCATCTTTTG GCATAAGGTCGCTGGCATCAAGTACTTCCACCACCAGCTTGTTCATGATGGTATTAATATTATGATGCAGCAAGTTAAAA CCAGGTTTTGAAATCCTAGATATGCGTGTGTAGTGTTCAATTATGATCTACAAGGAAAGAAAGAAAGAAAGAAAGAAAAG TTGGCAGTGAAGGATAGAGTTGAAGTGAAAAAGATGAGAGAGAGGACCAGAAGGGTAGGCGGTAGTGGTGATGATATGTT CATTAGAAACATTTGTTGGAGAGAGAAAGTGAGGAGATATGTGCATTGCTGTTTGGTGGCCCTTTGATTGATTCATATGG CTTTGATAGGTTTAGGAGGATATTCTAGATCTCTA
CDS sequence (LotjaGi3g1v0556600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGACATTGAGGATATGCTGATCGGAACCACAACTGGTCACCCGGCAGGCTTTCGTTTGCCAGTAGCGGCAGTTGG TGTTGGCGTTGGAACGAAGAGGAATCAGCGTTGTTCACCTTGTTCTTCTGCAATCCCTGGCACTCAGACTATCTACATGA AGACCTTCGGCTGCTCTCATAACCAGAGTGACAGTGAATATATGGCTGGTCAGCTTTCGGCTTTCGGCTATTCATTGAGT GATAACCCCGACGAAGCCGATCTATGGCTCATCAACACTTGCACAGTCAAATCCCCAAGTCAATCTGCCATGGACACCAT CATAGCAAAAGGTAAATCTTCAAATAAACCACTAGTTGTTTCTGGCTGTGTACCTCAAGGAAGTCGAGATTTGAAAGAGC TCGACGGGATCAGCATAGTTGGAGTCCAGCAAATTCATCGTGTTGTTGAAGTTGTAGAGGAGACTTTAAAAGGTCATGAA GTGCGTCTTTTGACCCGTAAGACATTGCCAGCACTTGACCTTCCAAAGGTGAGAAAGAACAAGTTTGTTGAGATTCTTCC AATTAATGTTGGTTGTTTAGGTGCGTGCACTTATTGCAAGACAAAGCATGCTCGGGGTCACCTAGGGAGTTACACTATAG ATAGCCTTGTTGGGCGTGTAAAATCTGTCATATCTGATGGAGTTAAAGAGATTTGGCTAAGCAGTGAAGACACTGGAGCT TATGGTCGTGACATTGGTGCCAATCTTCCAAATTTATTGAATGCATTAGTAGCAGAACTACCACCTAATGCGAGCACTAT GCTTCGTATCGGAATGACCAATCCTCCTTTTATCCTTGAGCACTTGAAAGAGATAGCAGAGATTTTGCGGCATCCATGTG TGTATTCTTTTTTGCATGTACCAGTTCAGTCTGGAAGTGATACTATTTTGAGTGCAATGAATCGGGAATATACTGTGAGT GAGTTCAGGACTGTTGTAGATACCTTAACTGAGCTTGTGCCAGGGATGCAGATTGCCACCGATATAATATGTGGATTTCC TGGTGAAACTGATGAGGATTTTTCACAAACTGTCAACCTCATCAAAGAGTACAAGTTCTCTCAAGTTCATATTTCACAAT TTTATCCTCGACCAGGGACACCTGCTGCAAGGATGAAAAAGGTTCCAAGTAATGTGGTGAAGAGAAGAAGCCGTGAACTG ACCAATGTTTTTGAAGCCTTCACACCATACTCTGGGATGGAAGGCAAAGTGGAAAGAATCTGGATTACTGATGTTGCATC TGATGGAGTTCACTTGGTTGGTCATACGAAGGGATATATACAAGTTCTTGTAATTGCTCCAGACTATATGCTGGGAACTT CAGCTATGGTTAAAATAACATCTGTTGGAAGGTGGTCAGTTTTTGGGGAAGTAATTGAGATGGTCAACCATGTAAGTGAT GATAAAGTCGTAAACAAGCAGGATCCCAATCAGGACATGCAAGAGCCAGAATCTTGTGCTTGTGGAAATGATATTGACAG CTGCTGTGGTCAGAGTAATCTCGATAAGAATGATCAGTCAAGAGGCCCTGCAGAGCCACAGAGTCAAAACAGTAGAAATT TCATCGGATGGATACTGAGGAAGCGGAAGCATCTGCACAAAGGGGTAGAGAGTGAACTTGCGTCCGGATCTGTTCAAAAT CAAGAAGGGAGCATGAAAAAGTTGGACTTTGTTGACAAGGCTCTTTTGAGCGGAATATCTATCAGCATCTTTATGATTAT TGCTATAGTAGCTGCTCTTACGTTTAGGGTTATTTGGTCCCAGTAA
Protein sequence (LotjaGi3g1v0556600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDIEDMLIGTTTGHPAGFRLPVAAVGVGVGTKRNQRCSPCSSAIPGTQTIYMKTFGCSHNQSDSEYMAGQLSAFGYSLS DNPDEADLWLINTCTVKSPSQSAMDTIIAKGKSSNKPLVVSGCVPQGSRDLKELDGISIVGVQQIHRVVEVVEETLKGHE VRLLTRKTLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSVISDGVKEIWLSSEDTGA YGRDIGANLPNLLNALVAELPPNASTMLRIGMTNPPFILEHLKEIAEILRHPCVYSFLHVPVQSGSDTILSAMNREYTVS EFRTVVDTLTELVPGMQIATDIICGFPGETDEDFSQTVNLIKEYKFSQVHISQFYPRPGTPAARMKKVPSNVVKRRSREL TNVFEAFTPYSGMEGKVERIWITDVASDGVHLVGHTKGYIQVLVIAPDYMLGTSAMVKITSVGRWSVFGEVIEMVNHVSD DKVVNKQDPNQDMQEPESCACGNDIDSCCGQSNLDKNDQSRGPAEPQSQNSRNFIGWILRKRKHLHKGVESELASGSVQN QEGSMKKLDFVDKALLSGISISIFMIIAIVAALTFRVIWSQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 573 | 573 | - | – | |
| PANTHER | 1 | 474 | 474 | 1.8E-236 | – | |
| PANTHER | 1 | 474 | 474 | 1.8E-236 | – | |
| ProSiteProfiles | 49 | 157 | 109 | 28.723 | ||
| Gene3D | 50 | 170 | 121 | 1.5E-21 | ||
| TIGRFAM | 50 | 467 | 418 | 1.0E-99 | ||
| TIGRFAM | 51 | 472 | 422 | 1.4E-136 | ||
| Pfam | 51 | 129 | 79 | 9.2E-19 | ||
| SFLD | 130 | 396 | 267 | 9.1E-27 | ||
| SFLD | 130 | 396 | 267 | 9.1E-27 | – | |
| SUPERFAMILY | 172 | 406 | 235 | 3.01E-44 | – | |
| Gene3D | 180 | 410 | 231 | 9.8E-72 | ||
| SMART | 182 | 406 | 225 | 1.1E-39 | ||
| ProSitePatterns | 186 | 206 | 21 | - | ||
| CDD | 186 | 390 | 205 | 9.94128E-7 | – | |
| Pfam | 190 | 361 | 172 | 7.0E-19 | ||
| ProSiteProfiles | 411 | 473 | 63 | 10.324 | ||
| Phobius | 574 | 599 | 26 | - | – | |
| TMHMM | 577 | 599 | 23 | - | – | |
| Phobius | 600 | 601 | 2 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | TRNA modification | The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically. | ||
| Molecular function | Transferase activity | Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2. | ||
| Molecular function | Methylthiotransferase activity | Catalysis of the addition of a methylthioether group (-SCH3) to a nucleic acid or protein acceptor. | ||
| Molecular function | N6-threonylcarbomyladenosine methylthiotransferase activity | Catalysis of the methylthiolation (-SCH3 addition) at the C2 of the adenosine ring of N6-threonylcarbomyladenosine (t6A) in tRNA, to form 2-methylthio-N6-threonylcarbamoyladenosine (ms2t6A). | ||
| Biological process | TRNA methylthiolation | The addition of a methylthioether group (-SCH3) to a nucleotide in a tRNA molecule. | ||
| Molecular function | Iron-sulfur cluster binding | Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms. | ||
| Molecular function | 4 iron, 4 sulfur cluster binding | Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. |
Expression pattern of LotjaGi3g1v0556600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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