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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0042000 |
| Transcript ID | LotjaGi6g1v0042000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT3G23750.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9LK43|TMK4_ARATH Receptor-like kinase TMK4; TrEMBL-Plants: tr|G7JAT8|G7JAT8_MEDTR LRR receptor-like kinase; Found in the gene: LotjaGi6g1v0042000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:8057186..8061379) extracted from Lotus japonicus Gifu genome v1.2.
AGAGCATGCACCTCATTTAACAACCCATTTTAAAAAATCAAAAAGACAAAAAAAAGACCATAACTGCCACATGGAGTTAG CTTAGTTTTGTTGTCAACCAAACCCTGTCTTCTTCTTCTTCTTTCCATTCTTTCTTCATTCATTCACTTCTCTAACAAAC TCTCTCTGTGTTCTGTTGTGTTGTGTAACTGTGTTCCTCATTCCCCCAAATCTAAATGAAAACCCTACTTTCTCTCTCTA CCCTCCTCCTATGGTTCTCTCTCCTCTCCCCCACCACCACCGCAGACGACGGCGCGTTCATGTCAAACCTTGCAAAAGCG CTGACTCCAACTCCCTCAGGGTGGTCGTCGTCGAGCTCATTCTGCGACTGGTCCGGCGTGAAATGCGACTCCGGCCGCGT CACCGTCATCGACCTCCGCTCCAACTCACTCACCGGAACACTCCCTACCGATCTGAACTCGCTCACTCAGCTCAACACGC TCTCTCTCAGAAACAATCTCCTCACCGGCGCGTTTCCCTCACTCGCCAACCTCACACTCCTCAAAACTGTTTACCTCGAC ACCAACAACTTCACCTCCGTCCCTGATGGTTGCTTCTTCGGTCTCACGAGCTTGCAGCAGCTCAGCATGACCGACAACAT CAACCTCAAGCCATGGACGATTCCTGCTGAGTTGACTCAGTCCACCAACCTCGTTGAACTGGATCTCGGAAATGCCAACC TCGTTGGTTCGTTACCGGACATTTTCAGCTCCTTGGTCAGCTTGCAGAGTCTCCGCCTCTCCTACAACAACCTCACCGGC GAGTTGCCGCAATCGTTATCCGGATCCGGGGTTCAGTTCGTGTGGCTCAACAACCAGAACGATGGGTTTGGGTTTACTGG TTCGATTGACGTGCTTGGTTCAATGACCCATTTGACTCAGGTGTGGCTACAGAAGAATCAGTTCACTGGTGCGATTCCTG ATCTCACGAACTGCACTGGTTTGTTTGATCTGCAGCTCCGGGATAACAAGCTGACAGGTGTGGTTCCGTCTTCGTTGATG GGTCTTGCTAGCTTGAAGAATGTTTCGTTGGATAACAACAAGCTTCAGGGTCCTTTTCCTTCGTTTGGGAAAGGAGTGAA GAACACTCTTGATGGGATTAACAGCTTCTGTCAATCTAGTCCTGGACCTTGTGACCCACGGGTTACGACTTTGCTTGATG TTGCTGCGGGTTTTGGGTATCCGTATCGGTTGGCGAGTTCATGGGGTGGGAATGATCCTTGTAAGGATTGGAGCTTTGTG GTGTGTGCTGGGGGGAAGATTGTTACGGTGAATTTGGAGAAGCAGAACTTGACAGGGATTATTTCACCTGCATTTGCCAA GTTAACTGATCTGAGGAAATTGTATCTTGGTGGTAACAATTTGAGTGGCTCCATACCTGGAAGCTTGACGGGTTTAGCTC AGCTCGAGGTTCTGGATGTGTCTGATAACAATCTCTCTGGAGAGATTCCCGAGTTCCCGGGTGACAAGGTGAAGTTCAAT TATGCAGGGAATGTTTTGCTTAGGAGTTCTGGAGGCAGTGGTGGTGGTGCAGGCGGTGGAACCACTCCCTCCGCTGATGC ACCAAGTGGAAGTCGGTCTGGAAAGGCAAGTGGGTCTTCCCTCTCACCGGCGTGGATCGCGGGTATTGCCATTATTGCAG TGTTCTTTGTTGCGGTTGTGTTGTTTGTGTTTTGTAAGTGTTATGCCAGAAACCGGCATGGGAAATTCGGTAGGGTTGAT AATCTTGAAAATGGAAAAGGCAACGTGAAAATTGATATGGTGAGTGTCTCGAATTCCAATGGATATGGCGGAGGTGGGGT TGCGAGTGAGTTACAGAGCCAGGCCAGTGAGCCTAGTGACCGTCAATTTTTTGAGGGTGGAAATGTTACTATTTCAATCC AAGTTCTCCGGCAAGTTACCGATAATTTCAGCCAAGATAACATTTTAGGGAGGGGAGGATTTGGAGTTGTTTATAAAGGG GAATTGCATGACGGAACTCAAATTGCTGTGAAGAGGATGGAATCTGGTCCAATGGGAAGTAAGGGAATGAATGAGTTCCA AGCAGAGATTGCGGTGCTGACTAAAGTTAGGCATAGACATTTGGTTGCTCTGTTAGGATACTGCGTGAATGGCAATGAAA GGCTTTTGGTGTATGAGTACATGCCACAAGGGACTTTAACACAACATCTGTTTGATTGGGGTGAAAATGGCTGTGCTCCT TTGACTTGGAAGCAAAGGGTAGCAATAGCTTTGGATGTTGCAAGGGGAGTGGAATACTTGCACAGCTTAGCTCAGCAGAG CTTCATTCACAGGGACTTGAAGCCCTCAAACATCCTATTGGGTGATGACATGAGAGCAAAGGTTGCAGATTTTGGGTTGG TTAAAAATGCACCTGATGGAAAGTATTCGGTCGAGACACGTTTAGCTGGAACATTTGGATATCTGGCACCTGAATATGCA GGTATTGAAAGCCTTTGATCATAAACTTGTCTTAATTTTAAAGCTCTTATCTATTTCCTTATTGCATTGCACCTTAATAT AATTGGTTCCGATTCCTATCTGTTTTTGAACTAGCTGTGTTGTTTTCTATTCTTCTGTTGCAGTTAGTTATGCATTGTTA TTTTTCCTGCAAAATTTGTCGTTTCCTTATAAATCTCCATGGTGGATTGTTTCATGGAACATAATGAGTTTTGCCATTTA TTGATAGACTACAAGTTAATGCGGTCAATTGTCCTTTTTGATTTCTGGTTGCTTTAAATCTTGGATTACTGTGTGAGATT TTGCTATATCTTATATAAAGAAAGTATTTAAGACAACCTATATGCATTTTCTTTTTTGATAAGCCAAAATTGAATTATAG GAAGCAAAAAGGGTGCTTCAACCCTTACAAATAAAGCTAGATGATAAAGGGGCTAGCTTGAAAAATTACCACCATCTACC ATTAGGTATCATCTATCAATAGGCAGTAATATATATCAGCATACATTTAATATCTTAGGAACTTAAGAAGTATTTAGTAC TTTCATTATTTAGTAATTAAGAGGACTAATTTGGAAGATTTAGAATAGTTCCTGTATTTTGTTGCTGATTGATGTTGATT CCCTTGTGCCCTGACTTGTCTTTTGTTACAATCATGCAGTGACTTCGACATTCCCACTAGCATACATTTTTTCATTTTTA AAATCATGCCCTGAAATTTTGCTCTTTCATGACCTGAATATTTTTTTTTCTGTAGAACTAAATAGGTTTAGCTGAGCCAG ATTATTTTGGCATCAAATGTGATAGGTTGCATTTGCTTTTGTGCTAGCCTATTCCTTGACTTATAATTAATGTAATCTTG TTTCTTGCCAGCTACGGGAAGAGTGACAACCAAAGTAGATGTTTACGCATTCGGAGTAGTTCTGATGGAACTAATCACTG GTAGAAAGGCATTGGATGATACTGTGCCTGATGAAAGGTCACACCTGGTTTCATGGTTCCGAAGGGTGCTAGTTAACAAG GAGAACATCCCTAAGGCAATTGATCAAACACTGAACCCGGATGAAGAAACCATGGAGAGCATATACAAAGTGGCTGAGCT AGCAGGCCATTGCACTGCTCGGGAACCATACCAAAGGCCAGATATGGGTCATGCAGTGAATGTCCTGGTTCCTATGGTAG AGCAATGGAAGCCTACAAGCCATGAAGAAGAAGAAGGTGATGGCATTGACCTTCACATGAGCCTTCCTCAAGCTCTGAGA AGATGGCAAGCCAATGAAGGCACTTCCACAATGTTTGATGACATGTCCTTCTCACAAACTCAATCTAGCATTCCTGCTAA ACCTTCAGGATTTTCAGACTCCTTTGATTCACTGGATTGCCGGTAATAAAAACCAAATAAAATAGAGACCACGTTTAATT GTATCACAAGTTAATTTTTTTTTTTTTAAATGATGATTTTTTGTGTTCTTGCAATTTCTTGTTGTACAAGTCTGATGTCA TTTATTGATTTTTTAAAGCTAGTGTATTGGTTTAGTGGATGGTTGGGTTCTTAGATGGGGAAATTATAGTGTAAATACAT ACATTCCTTTGAGCATTGTTTGTGCTGTTGTCTAATTAAAAATTTAGTTATGCACTTTCAGACACTTTTTTAATATTTAA TTAATGTGATAACTTCCTCAACTCTCCATTTCCA
CDS sequence (LotjaGi6g1v0042000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAACCCTACTTTCTCTCTCTACCCTCCTCCTATGGTTCTCTCTCCTCTCCCCCACCACCACCGCAGACGACGGCGC GTTCATGTCAAACCTTGCAAAAGCGCTGACTCCAACTCCCTCAGGGTGGTCGTCGTCGAGCTCATTCTGCGACTGGTCCG GCGTGAAATGCGACTCCGGCCGCGTCACCGTCATCGACCTCCGCTCCAACTCACTCACCGGAACACTCCCTACCGATCTG AACTCGCTCACTCAGCTCAACACGCTCTCTCTCAGAAACAATCTCCTCACCGGCGCGTTTCCCTCACTCGCCAACCTCAC ACTCCTCAAAACTGTTTACCTCGACACCAACAACTTCACCTCCGTCCCTGATGGTTGCTTCTTCGGTCTCACGAGCTTGC AGCAGCTCAGCATGACCGACAACATCAACCTCAAGCCATGGACGATTCCTGCTGAGTTGACTCAGTCCACCAACCTCGTT GAACTGGATCTCGGAAATGCCAACCTCGTTGGTTCGTTACCGGACATTTTCAGCTCCTTGGTCAGCTTGCAGAGTCTCCG CCTCTCCTACAACAACCTCACCGGCGAGTTGCCGCAATCGTTATCCGGATCCGGGGTTCAGTTCGTGTGGCTCAACAACC AGAACGATGGGTTTGGGTTTACTGGTTCGATTGACGTGCTTGGTTCAATGACCCATTTGACTCAGGTGTGGCTACAGAAG AATCAGTTCACTGGTGCGATTCCTGATCTCACGAACTGCACTGGTTTGTTTGATCTGCAGCTCCGGGATAACAAGCTGAC AGGTGTGGTTCCGTCTTCGTTGATGGGTCTTGCTAGCTTGAAGAATGTTTCGTTGGATAACAACAAGCTTCAGGGTCCTT TTCCTTCGTTTGGGAAAGGAGTGAAGAACACTCTTGATGGGATTAACAGCTTCTGTCAATCTAGTCCTGGACCTTGTGAC CCACGGGTTACGACTTTGCTTGATGTTGCTGCGGGTTTTGGGTATCCGTATCGGTTGGCGAGTTCATGGGGTGGGAATGA TCCTTGTAAGGATTGGAGCTTTGTGGTGTGTGCTGGGGGGAAGATTGTTACGGTGAATTTGGAGAAGCAGAACTTGACAG GGATTATTTCACCTGCATTTGCCAAGTTAACTGATCTGAGGAAATTGTATCTTGGTGGTAACAATTTGAGTGGCTCCATA CCTGGAAGCTTGACGGGTTTAGCTCAGCTCGAGGTTCTGGATGTGTCTGATAACAATCTCTCTGGAGAGATTCCCGAGTT CCCGGGTGACAAGGTGAAGTTCAATTATGCAGGGAATGTTTTGCTTAGGAGTTCTGGAGGCAGTGGTGGTGGTGCAGGCG GTGGAACCACTCCCTCCGCTGATGCACCAAGTGGAAGTCGGTCTGGAAAGGCAAGTGGGTCTTCCCTCTCACCGGCGTGG ATCGCGGGTATTGCCATTATTGCAGTGTTCTTTGTTGCGGTTGTGTTGTTTGTGTTTTGTAAGTGTTATGCCAGAAACCG GCATGGGAAATTCGGTAGGGTTGATAATCTTGAAAATGGAAAAGGCAACGTGAAAATTGATATGGTGAGTGTCTCGAATT CCAATGGATATGGCGGAGGTGGGGTTGCGAGTGAGTTACAGAGCCAGGCCAGTGAGCCTAGTGACCGTCAATTTTTTGAG GGTGGAAATGTTACTATTTCAATCCAAGTTCTCCGGCAAGTTACCGATAATTTCAGCCAAGATAACATTTTAGGGAGGGG AGGATTTGGAGTTGTTTATAAAGGGGAATTGCATGACGGAACTCAAATTGCTGTGAAGAGGATGGAATCTGGTCCAATGG GAAGTAAGGGAATGAATGAGTTCCAAGCAGAGATTGCGGTGCTGACTAAAGTTAGGCATAGACATTTGGTTGCTCTGTTA GGATACTGCGTGAATGGCAATGAAAGGCTTTTGGTGTATGAGTACATGCCACAAGGGACTTTAACACAACATCTGTTTGA TTGGGGTGAAAATGGCTGTGCTCCTTTGACTTGGAAGCAAAGGGTAGCAATAGCTTTGGATGTTGCAAGGGGAGTGGAAT ACTTGCACAGCTTAGCTCAGCAGAGCTTCATTCACAGGGACTTGAAGCCCTCAAACATCCTATTGGGTGATGACATGAGA GCAAAGGTTGCAGATTTTGGGTTGGTTAAAAATGCACCTGATGGAAAGTATTCGGTCGAGACACGTTTAGCTGGAACATT TGGATATCTGGCACCTGAATATGCAGCTACGGGAAGAGTGACAACCAAAGTAGATGTTTACGCATTCGGAGTAGTTCTGA TGGAACTAATCACTGGTAGAAAGGCATTGGATGATACTGTGCCTGATGAAAGGTCACACCTGGTTTCATGGTTCCGAAGG GTGCTAGTTAACAAGGAGAACATCCCTAAGGCAATTGATCAAACACTGAACCCGGATGAAGAAACCATGGAGAGCATATA CAAAGTGGCTGAGCTAGCAGGCCATTGCACTGCTCGGGAACCATACCAAAGGCCAGATATGGGTCATGCAGTGAATGTCC TGGTTCCTATGGTAGAGCAATGGAAGCCTACAAGCCATGAAGAAGAAGAAGGTGATGGCATTGACCTTCACATGAGCCTT CCTCAAGCTCTGAGAAGATGGCAAGCCAATGAAGGCACTTCCACAATGTTTGATGACATGTCCTTCTCACAAACTCAATC TAGCATTCCTGCTAAACCTTCAGGATTTTCAGACTCCTTTGATTCACTGGATTGCCGGTAA
Protein sequence (LotjaGi6g1v0042000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKTLLSLSTLLLWFSLLSPTTTADDGAFMSNLAKALTPTPSGWSSSSSFCDWSGVKCDSGRVTVIDLRSNSLTGTLPTDL NSLTQLNTLSLRNNLLTGAFPSLANLTLLKTVYLDTNNFTSVPDGCFFGLTSLQQLSMTDNINLKPWTIPAELTQSTNLV ELDLGNANLVGSLPDIFSSLVSLQSLRLSYNNLTGELPQSLSGSGVQFVWLNNQNDGFGFTGSIDVLGSMTHLTQVWLQK NQFTGAIPDLTNCTGLFDLQLRDNKLTGVVPSSLMGLASLKNVSLDNNKLQGPFPSFGKGVKNTLDGINSFCQSSPGPCD PRVTTLLDVAAGFGYPYRLASSWGGNDPCKDWSFVVCAGGKIVTVNLEKQNLTGIISPAFAKLTDLRKLYLGGNNLSGSI PGSLTGLAQLEVLDVSDNNLSGEIPEFPGDKVKFNYAGNVLLRSSGGSGGGAGGGTTPSADAPSGSRSGKASGSSLSPAW IAGIAIIAVFFVAVVLFVFCKCYARNRHGKFGRVDNLENGKGNVKIDMVSVSNSNGYGGGGVASELQSQASEPSDRQFFE GGNVTISIQVLRQVTDNFSQDNILGRGGFGVVYKGELHDGTQIAVKRMESGPMGSKGMNEFQAEIAVLTKVRHRHLVALL GYCVNGNERLLVYEYMPQGTLTQHLFDWGENGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMR AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRKALDDTVPDERSHLVSWFRR VLVNKENIPKAIDQTLNPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPMVEQWKPTSHEEEEGDGIDLHMSL PQALRRWQANEGTSTMFDDMSFSQTQSSIPAKPSGFSDSFDSLDCR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 4 | 17 | 14 | - | – | |
| Phobius | 18 | 23 | 6 | - | – | |
| Phobius | 24 | 478 | 455 | - | – | |
| Pfam | 25 | 58 | 34 | 1.5E-4 | ||
| Gene3D | 25 | 315 | 291 | 3.7E-67 | ||
| SUPERFAMILY | 43 | 427 | 385 | 2.21E-51 | – | |
| SMART | 83 | 102 | 20 | 300.0 | ||
| SMART | 106 | 129 | 24 | 0.31 | ||
| SMART | 180 | 204 | 25 | 10.0 | ||
| Pfam | 182 | 202 | 21 | 1.4 | ||
| PANTHER | 221 | 922 | 702 | 1.8E-246 | – | |
| PANTHER | 221 | 922 | 702 | 1.8E-246 | – | |
| Gene3D | 320 | 439 | 120 | 8.7E-31 | ||
| Pfam | 324 | 357 | 34 | 0.11 | ||
| Pfam | 364 | 420 | 57 | 5.8E-10 | ||
| SMART | 383 | 406 | 24 | 23.0 | ||
| SMART | 407 | 431 | 25 | 220.0 | ||
| MobiDBLite | 447 | 469 | 23 | - | – | |
| TMHMM | 478 | 500 | 23 | - | – | |
| Phobius | 479 | 500 | 22 | - | – | |
| Phobius | 501 | 926 | 426 | - | – | |
| Gene3D | 540 | 655 | 116 | 7.8E-36 | – | |
| SUPERFAMILY | 554 | 854 | 301 | 1.46E-79 | ||
| SMART | 578 | 858 | 281 | 5.3E-44 | ||
| ProSiteProfiles | 578 | 858 | 281 | 41.234 | ||
| Pfam | 581 | 852 | 272 | 1.6E-47 | ||
| ProSitePatterns | 584 | 606 | 23 | - | ||
| CDD | 584 | 854 | 271 | 8.87165E-95 | – | |
| Gene3D | 656 | 878 | 223 | 1.6E-57 | – | |
| ProSitePatterns | 703 | 715 | 13 | - | ||
| MobiDBLite | 903 | 926 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0042000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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