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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0181100 |
| Transcript ID | LotjaGi6g1v0181100.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|I1KXU8|I1KXU8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:47307427..47315531) extracted from Lotus japonicus Gifu genome v1.2.
CTTGTAGGGGTGCTGCTGACTAGCAAATCAGGACAGAAGTATCAGTTTCTGCAGAACTAGTGGTTCCATGGTTGTTAAAA AAAAATTCCCCTCTGATTCTAGCTGCTTCTGTAGTGGACTAAATATTTCATTTCCAAATAGAAAAGAGTGTTGGATAATG ATCTTATTGTAGTAAATTATGTCATAAAGTTGTCTTTTAAATTTTCATGTGTTGATATGCATTTATTCTATTTTTGTAGT TTGGTTGCCAAATATGCTGCTGACTATACTGACTATGCTTCTTTTCATATCTGAACTACAGGCCATTACTGCATTGAAGA AAGGGGCTTACTTGCTCAAGTATGGAAGAAGGGGGAAGCCAAAGTTTTGCCCCTTCCGGCTTTCCAATGTGAGTTTTGTA CTCCCTCCCTCTGCCATATGTGTGTGTGTGTGTGTGTGTGTATTATACGAGAAATAATTTCGTATGTAAGAGTTAGAGGA GTAAATCTTAACCACTAAATGTAGTTTCACCAGTCATCACTGTAACATTCGTGATGGAAATTTTGGGGGTGGGGTGGAGT CCTCTCTCAATCATGAGACTGATTATATCTGTGTTAGACACCTTGGGAAGCTTTGCCTTGCCAAAAATAGTTAATTCTTG TTAAAGGAAGCAATCTAATCTGCATAACTAGAATTAAAATTTGGACTTAAGCAAATCTGCCGTTACCTTTATGACCATAT CAAGCTTTGCTAAACGCTGTGGTTATTTGGGATTTGGCTACTTATAGAATCGGCTTGCTAGCATTCATTGCTTTGAAGTC TTATGAATTTTCTTATTGCTATAATTTTATTGTGGCTTATTATGCTTCACCTTCAATCCATTTTTTTTCTATCTTACATA TAAAACATTTGTGTCTTCATCTTACCACTTTAGCTTGGGGGGGGGGGGGTAATTGCTTTATTTCATGTTATCAGAGCCTC ATTGATCAAGTGGTCAGGAATTTTATCGCTGACACCTCTCCCATTCTCAAAATAAAAAAATTGAATTTCAGTACAAAGTT AGTAGAGCTATGCATAATTCATGATTTAAGCGTAAAGGACTCTTGCATAAGGAAGATTGTTAGATAACCATTCACGAGCT TTCATCTAATGGCTTAGGTTTTAAGGATTTTTGAATCTTGAGTCTTGACATATTATTGGAGTCTATGTGATCAAGTGATT TAGGAGTTTGATCCTTGCTGACCCGATCCTTCTAAATAATAGTTGATTTTCAAAATGAGCTTGCACATTATGCACACATC AACCCGGAAGGGCTGTAGCTTGGGGGAGCATGTTAGATATTTAAAATAATTTGTGTTCCTTCAATTTAGAGCTTAAGCTT TTGGGTGTAATTGGTTGATGATAGTTTCCATGTATTGTCTTTTGTCAGAAGTTGTCTGGTTGTCAAAAGTTAAAAAATGT TTATTTTTTCTATTGCTTTCAGGACGAATCTGTCTTGATATGGTTCTCAGGAAAAGAAGAGAAACGTCTTAAACTAACTA ATGTTTCTAGAATTATATCTGGACAACGAACGGTAAGTCCTTTAAAATGACAATAATCATTGGTGCTATTTCACTGCTTC AGATTTAACCAATGGTGCCATGTCGTATTTAGATAATTAATTGTTGTAAGATATTTCTGTAATTTTTACTATTAATAAAA TTACATTTTATGCATGCATTCTTTTGATCTCACGATTTTGCTCCTAGTTGAGATATATAAATAGGAATTGTCATTCACTG TCTATTTTCTACTTAGAACTTAGAAGCTTTATTTCTGTTATTATCTTGAATCTTTTCCAACATATACTTGTTTATGGGAG TTATAGGATGCTGTTTCCCTTTAGTGGAGATTTCAGATTGCCACTGATGCTTAATTTGTTGGGGATGTGCATTATCCCTC TTCCCCTTGCTATAATTTTTGTCGTTTTCTCATAGTAACTATTATGCTGTTTCTTTCCATGAATATATATAAATGCTGAT ATACTTCTTTGCTGTCTTTTCGATTAAATTGTCATTTCTGTAAAAACATACCAGAGTCATACGATGCAGATGTTCTGGTG AGCATGAGCATGGGTGTACTTTAGTTGTCAATACATTCATATTTCTTTCTTGACTTTGAGCCACTGCAGTGAATGCATCT CAACTGATAATGTTTCCTCATCTGTCACTGTTATGACTGATTACATCCTTATTTTTTCAGCCTATCTTTCAAAGATATCC ACGGCCTGAGAAGGAATACCAGTCATTTTCACTTATCTACAGTGATAGGTCACTGGATTTGGTATAAATTTCTCATTCTC CCTTTATGGAAAATGACCCATATGTGCTGCATAGGAAAAGTGTCATTTCAGTTCTTGGGTAACCAATATCTGATTGAAAT GTATCAACTCAATTTATCAATGAAATACCTAAGTTAATCTCTATAAGGAGTTGTGGCAACTGGCAAGAATGTGTGCTACA TTCATGGTTAAAACTGTGAGTAAATTTAGTTTAAATTCATTCTTAATATTGTATAATCACAAACTTGAAATGGAAATATT TTCCGATGCTGCATTGATGGGTCATTTTCCCTCTTTAGGTGTATGCTTGGCCTGCTGCTTTGATTGGACAGTTATCATAG ACATTATGAGCATTATTTAGGTATTTTGTTTGCATAAGCTTAATAAAGTCTTGTGATCTGTTTCTTCTCTACTAGATTTG CAAGGATAAAGATGAAGCTGAGGTTTGGTTCAGTGGGTTGAAAACATTGATTTCACGCAGTCATAACCGGAAGTGGAGAA CAGAGTCAAGAAGTGACGGCATTCCATCTGGAGCTAATAGTCCTCGAACGTACACTAGAAGTTCTCCATTGAATTCTCCA TTTGGTAGTAATGAAAGCTTTCAAAAGGTATTAATATATGTGTCCTTTCATGTTCTCCCTGTTTGACTAGACTTCAGTTG AAGATGTTCACTGAAATTTTTTGTTTTCTCTATTCAGGATAGTGGGGATCATCTTCCTCTTCATAGCCCATATGAAAGTC CTCCCAAGAATGGTTTGGATAAGGCATTTTCTGATGTGATTTATTATCCTCTTCCTCCAAAGGGTTTCTTCCCTCCAGAT TCTGCCAGTGGTTCAGTCCACTCTGTGTCGTCAGTTGGATCTGATAGCATGCATGGTCACATGAAGACAATGCCTATGGA TGCTTTTCGAGTTAGTTTATCAAGTGCTGTTAGTTCATCTAGCCAAGGTTCTGGTCATGATGATGGTGATGCCTTAGGGG ATGTTTTCATTTGGGGGGAAGGCACAGGTGATGGTGTTTTGGGTGGTGGAGCTCACCAAGTTGGAAGTTGCTTTGATGCT AAAATGGATTCTCTACTGCCCAAAGCCTTGGAATCGGCAGTAGTTCTTGATGTACAGAATATTGCTTGTGGTGGTAAACA TGCAGCCTTAGTGTCCAAACAAGGTGAAATTTTCTCTTGGGGGGAAGAATCAGGAGGCAGGCTTGGGCATGGCGTTGACT CTGATGTTCCCCATCCAAAGCTTATTGAATCTCTAAGTAGTACAAATATTGAACTTGTAGCTTGTGGGGAGTATCATACA TGTGCTGTGACACTTTCTGGTGATCTTTATACATGGGGTGATGGAACTTACAATTATGGTCTTCTGGGGCATGGAAATCA GGTGAGCCACTGGGCCCCAAAAAGAGTACATGGCCTCTTGGAGGGCATACATGTTTCTTCTATTTCTTGTGGTCCATGGC ACACTGCTGTTGTAACCTCTGCGGGACAATTATTTACTTTTGGTGATGGTACATTTGGTGTTCTGGGTCATGGAGACCGA AAAAGTGTTTCCCTTCCAAGAGAAATAGAGTCCCTGAAGGGTCTTCGCACTGTGCAGGCTGCTTGTGGTGTTTGGCATAC TGCTGCAGTTGTGGAAGTCATGGTTGGAAATTCAAGTTCCAGCAACTGCTCTTCAGGGAAGCTGTTTACTTGGGGTGATG GAGACAAAGGTCGGCTTGGGCATGGTGACAAGGAAGCCAAACTTGTTCCCACCTGTGTTGTAGCCCTACTTGAACCCAAT TTTTGTCAGGTTGCTTGTGGTCATAGTATGACTGTTGCACTTTCTAGATCAGGCCATGTCTATACCATGGGCAGTTGTGT CTATGGTCAGTTAGGAAATCCTAAAGCTGATGGGAAGCTACCAACTCGTGTTGAAGGAAAGCTTTCAAAAAGCTTTGTGG AGGAAATAGCTTGTGGTGCATATCATGTTGCGGTTTTAACTTCAAGGACTGAAGTTTACACTTGGGGTAAGGGTGCAAAT GGTCGTTTAGGCCATGGAGATACTGATGATAAAAACTCCCCAACATTAGTAGAAGCATTGAAAGACAAACAAGTCAAAAG TATTGCTTGTGGTACAAATTTCACCGCAGCCATATGCCTGCATAAGTGGGTATCTGGTGTTGACCAATCCATGTGTTCTG GTTGCCGTCTGCCATTTAATTTCAAAAGGAAACGCCACAATTGTTATAATTGTGGACTTGTTTTTTGCCATTCATGCAGC AGTAAGAAGTCTGTTAAGGCATCAATGGCACCAAACCCCAACAAACCGTATCGTGTCTGTGATAGTTGTTATAATAAGAT AAAGAAAGCTACAGTGACTGATTCTTCGTCTCAGTCTTCAATGAGCAGAAGAGGAAGTATTAATCAGGGGTCACTTGAGT TTGTTGGTAAGGATGATAAATTGGATTCCAAATCAAATAATCAGATTGGCAGGTTCTCTTCAATGGAATCCTTGAATCAA GTGGACAGCAGATCTTCAAAGAAAAATAAGAAATTGGAATTCAACAGTAGCCGTGTCTCGCCTGTTCCAAATGGAGGTTC ACAATGGGGAGCAAGGAATATTTCCAAATCTTTTAATCCTGTTTTTGGATCATCAAAGAAGTTTTTTTCAGCTTCTGTTC CTGGATCTAGAATTGTTTCCCGGTCAACATCCCCAGTATCTAGACGGCCTAGTCCACCTCGTTCAACTACTCCAACCCCA ACGCTGGGAGGACTTACATCCCCGAAGATGGTCGTGGATGATGCCAAGATGACCAATGACAGCCTCAGTCAAGAGGTTGT TAAATTAAGATCACAGGTATTTTATTTTATGCCTACATTGATAGACGATGTACCCTTTCTGAGATTTTTTTTTTGAATAG TTTTAATGTGGCACCCCTTTCTGTATTTGAACTAGTTTTTCTTTTTTCCTTTTTGGAAATGGAATTATGGATTATAGCCA AATGGCCCAACCAAGCCATCATGAGGAAAAAAAGGCCAAGCATGAAGTTTGACACTAGTTGTTTGCTATTAAGCTTGAAT TGGTGCTAGTAAAATGCATATTTTAATTGAAAGTGACTTAATTACTTGCTGTATTGTCTGGTTATGGTTAGAGGTGAATA ACAGTCTCAAAATCCACAAGAATTTAAAATTTATGTATGTGTAGAGATTTAGTATTGCCATGCAGATTTTACTTTTTAAT ATTGTCATGTCAGAGTATGTGTGGCATGTAAGATGTAACTACTTCAGGTAGGGCCATCATGATCAAAGCTGGCTCAGGAA CTTAGAGTCTAAGACTCAGTTTGCTAACAGCTCAATAAGCTAGGCTCTTTAACTTAGTGAGCGGGCTTGATTTGAAAATT TCGACTTTAGTAAAATGAAAACCGAGCTTGAGCTTTTATAGATTTGACTTAGCTTGGCTCATTGCTAGTCCTTGTTTAAG GTGGTTAGATTCTGCTTATAAGCTTTTATTTCACGTAAAGGAAGGTGATTTTGTAACCAAGAGAACCAGAGGAGTTTTAG CTAGTAGCAACAATTGGGTTAAATTCGCTAGGAGTGCACTAAATGACATGGGTTTCACTCTGTATTTGGTGGGAGCTATG TGAGTTGCACCACATAATGGTGTATTAGAGAGTGACTTGCAAGTATGTCTCTTACAATCAAATGTGCTGTGCACACATTT GATGATACCTACTTTTATTCCTTGGTTGGTTTTTGTTAAATTTGAGTTGATCCAGAAATTAACTGGGGACTTTTCCTTAC CTTTTTTTACATGGTTCAGTTAATCTATTTGGAAGAGCTTCTTCTGATCACTTATGAAACATTTTTTCATAAACAACAGT TGGAAATATGATACCTATATTTTACTGTCATGGGAAAGAAAATGATTGCTTTCTCCTCCTTTCCCCTTATTTTTCTAAGC CACTTTGCTCACTTGGTTATCTAGCCTGATGAGTTTTCTCCCACTTTAGGTGGAAAGCTTGAATCGGAAAGCCCAGCTTC AAGAAATTGAGTTGGAAAGAACAACTAAACAGCTAAAAGAAGCAATATCAATTGCCAACGAAGAGACTGCCAAATGCAAA GCAGCAAAGGAAGTGATCAAGTCGCTTACTGCCCAGGTAAAAATTCTAATTCCTTGAACCATGTTTAACAAACTAGATTC CTTGCGGCAAAAGGCCCTTACACACTCATGATGCAAATACGATGGACCGAAAAAAATTTATTTCCTTGCACTCAACTAGA ACAAATTTTGAGTACTATTGTAGTACACTGATTACTTAGAGCTCCCTCTAACAAATTGAATGATATCTCTTTTATCTTAC TCTAAAAATAAAAGGAAAAACTACTAACCATATATTATATGGAGTTTAGCACATATGAAAGTTTTTCCCTGAACTGGGTT CACACACGGAATAGTGGTTGGTTAACTTTTTCCTTTTCCTTTTAAAGAACCTAACTACTATCTCCTTGAAAAACCTTATT CAAGCAGATGCTACGCCTATGTAAGTTTTCATAAGTTGTTTGGTTCACCTTGTCGAACTCAACAAGTTCAGTAGAGAAGG TGGACTAATAGGTGAATGTTTTTTAGATGAGGATATATAAATGTGATTGTCACTTGTGAGACCAGCATGATTCCCTTGAT GGTTGGTGTCTCTTTAAATAAATGTGTTTCTTTCTTCTTTGGTGTTAGAGTTGACACTTATACTAGAGTGCTCAAACTTG GGGACTTTTAGTCCAGAGTTAAATTAACCAGGACTAGCCTTCTGGAAAAATAAATATAGGCCTAAAATTTAGGAAAATCT TGTAAAATAAAGTTCATACGTTGATTTGATACAAGTGTCTGCCTAAATTTAATAATGCAATATAATTTCCTAAAATAACT CTAGGATATTAGCACTGATAGTGTAAGAATGAGCCATAACAGTTTGGCCCAGCATCAATACTAAACCAGAGGATTTCGAT TTAAGCTTGTCTTATAGACTTGTACTAGGTGTATAAGAACTAGTCTCATTGATCATACACTTTGTTTCTTGATCTGTATA GTTGAAGGACATGGCCGAGAGGCTGCCTATAGGAGCAACCAGGAATGTTAGATCACCATCTCTTGCTTCCTTTGGTTCCG ACCTTGGTTCCAATGACGTTACCAATGCTACGATTGATCAATTGACTATTCAAACAAGAAGCCAAGAGTCAGACTTAACA GGATCAAATGACCAGTTGCTTTCAAATGGATCAAGCACTATCACCAACCGTAGTGCAGGTCACGGTAAACACAGTCAATC AAATGCAACTAGCAGAAATGGGTACAAAACAAAGGATAACGAGTCTCGAAATGAAACTGAATGGGTTGAGCAAGATGAAC CTGGTGTATACATTACTCTCACCTCTCTACCAGGAGATGTAATAGATCTTAAGAGAGTTCGCTTCAGGTATGGAATGCTC TATTGCATTGATGTTGTGTTTTTGTCAACTTTCATTATTTACTTTCCAAAATTTGGTATAGTATGATACAAATAGTGTCA TTCCTTTAATTCAATATCTGATGGGGAAACAAAGACTTTACTAGCAAGTAGCAACTAAGATAATTATGTTATATTTCATA CATAGGCCATGTTATATAACCTGGGCTTTAACCTTTGCATTGGTGGATGCAGTCGAAAGCGGTTTAGTGAGAAACAAGCA GAACAATGGTGGGCTGAGAATCGGGCAAGAGTATATGAACTGTACAACGTGCGCTTGATTGACAAGTCAAGTATTGGTGT TGGGAGTGAGGAACTGGCTCATTGA
CDS sequence (LotjaGi6g1v0181100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATGGTCACATGAAGACAATGCCTATGGATGCTTTTCGAGTTAGTTTATCAAGTGCTGTTAGTTCATCTAGCCAAGG TTCTGGTCATGATGATGGTGATGCCTTAGGGGATGTTTTCATTTGGGGGGAAGGCACAGGTGATGGTGTTTTGGGTGGTG GAGCTCACCAAGTTGGAAGTTGCTTTGATGCTAAAATGGATTCTCTACTGCCCAAAGCCTTGGAATCGGCAGTAGTTCTT GATGTACAGAATATTGCTTGTGGTGGTAAACATGCAGCCTTAGTGTCCAAACAAGGTGAAATTTTCTCTTGGGGGGAAGA ATCAGGAGGCAGGCTTGGGCATGGCGTTGACTCTGATGTTCCCCATCCAAAGCTTATTGAATCTCTAAGTAGTACAAATA TTGAACTTGTAGCTTGTGGGGAGTATCATACATGTGCTGTGACACTTTCTGGTGATCTTTATACATGGGGTGATGGAACT TACAATTATGGTCTTCTGGGGCATGGAAATCAGGTGAGCCACTGGGCCCCAAAAAGAGTACATGGCCTCTTGGAGGGCAT ACATGTTTCTTCTATTTCTTGTGGTCCATGGCACACTGCTGTTGTAACCTCTGCGGGACAATTATTTACTTTTGGTGATG GTACATTTGGTGTTCTGGGTCATGGAGACCGAAAAAGTGTTTCCCTTCCAAGAGAAATAGAGTCCCTGAAGGGTCTTCGC ACTGTGCAGGCTGCTTGTGGTGTTTGGCATACTGCTGCAGTTGTGGAAGTCATGGTTGGAAATTCAAGTTCCAGCAACTG CTCTTCAGGGAAGCTGTTTACTTGGGGTGATGGAGACAAAGGTCGGCTTGGGCATGGTGACAAGGAAGCCAAACTTGTTC CCACCTGTGTTGTAGCCCTACTTGAACCCAATTTTTGTCAGGTTGCTTGTGGTCATAGTATGACTGTTGCACTTTCTAGA TCAGGCCATGTCTATACCATGGGCAGTTGTGTCTATGGTCAGTTAGGAAATCCTAAAGCTGATGGGAAGCTACCAACTCG TGTTGAAGGAAAGCTTTCAAAAAGCTTTGTGGAGGAAATAGCTTGTGGTGCATATCATGTTGCGGTTTTAACTTCAAGGA CTGAAGTTTACACTTGGGGTAAGGGTGCAAATGGTCGTTTAGGCCATGGAGATACTGATGATAAAAACTCCCCAACATTA GTAGAAGCATTGAAAGACAAACAAGTCAAAAGTATTGCTTGTGGTACAAATTTCACCGCAGCCATATGCCTGCATAAGTG GGTATCTGGTGTTGACCAATCCATGTGTTCTGGTTGCCGTCTGCCATTTAATTTCAAAAGGAAACGCCACAATTGTTATA ATTGTGGACTTGTTTTTTGCCATTCATGCAGCAGTAAGAAGTCTGTTAAGGCATCAATGGCACCAAACCCCAACAAACCG TATCGTGTCTGTGATAGTTGTTATAATAAGATAAAGAAAGCTACAGTGACTGATTCTTCGTCTCAGTCTTCAATGAGCAG AAGAGGAAGTATTAATCAGGGGTCACTTGAGTTTGTTGGTAAGGATGATAAATTGGATTCCAAATCAAATAATCAGATTG GCAGGTTCTCTTCAATGGAATCCTTGAATCAAGTGGACAGCAGATCTTCAAAGAAAAATAAGAAATTGGAATTCAACAGT AGCCGTGTCTCGCCTGTTCCAAATGGAGGTTCACAATGGGGAGCAAGGAATATTTCCAAATCTTTTAATCCTGTTTTTGG ATCATCAAAGAAGTTTTTTTCAGCTTCTGTTCCTGGATCTAGAATTGTTTCCCGGTCAACATCCCCAGTATCTAGACGGC CTAGTCCACCTCGTTCAACTACTCCAACCCCAACGCTGGGAGGACTTACATCCCCGAAGATGGTCGTGGATGATGCCAAG ATGACCAATGACAGCCTCAGTCAAGAGGTTGTTAAATTAAGATCACAGGTGGAAAGCTTGAATCGGAAAGCCCAGCTTCA AGAAATTGAGTTGGAAAGAACAACTAAACAGCTAAAAGAAGCAATATCAATTGCCAACGAAGAGACTGCCAAATGCAAAG CAGCAAAGGAAGTGATCAAGTCGCTTACTGCCCAGTTGAAGGACATGGCCGAGAGGCTGCCTATAGGAGCAACCAGGAAT GTTAGATCACCATCTCTTGCTTCCTTTGGTTCCGACCTTGGTTCCAATGACGTTACCAATGCTACGATTGATCAATTGAC TATTCAAACAAGAAGCCAAGAGTCAGACTTAACAGGATCAAATGACCAGTTGCTTTCAAATGGATCAAGCACTATCACCA ACCGTAGTGCAGGTCACGGTAAACACAGTCAATCAAATGCAACTAGCAGAAATGGGTACAAAACAAAGGATAACGAGTCT CGAAATGAAACTGAATGGGTTGAGCAAGATGAACCTGGTGTATACATTACTCTCACCTCTCTACCAGGAGATGTAATAGA TCTTAAGAGAGTTCGCTTCAGTCGAAAGCGGTTTAGTGAGAAACAAGCAGAACAATGGTGGGCTGAGAATCGGGCAAGAG TATATGAACTGTACAACGTGCGCTTGATTGACAAGTCAAGTATTGGTGTTGGGAGTGAGGAACTGGCTCATTGA
Protein sequence (LotjaGi6g1v0181100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHGHMKTMPMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGAHQVGSCFDAKMDSLLPKALESAVVL DVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGT YNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLR TVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSR SGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNSPTL VEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSVKASMAPNPNKP YRVCDSCYNKIKKATVTDSSSQSSMSRRGSINQGSLEFVGKDDKLDSKSNNQIGRFSSMESLNQVDSRSSKKNKKLEFNS SRVSPVPNGGSQWGARNISKSFNPVFGSSKKFFSASVPGSRIVSRSTSPVSRRPSPPRSTTPTPTLGGLTSPKMVVDDAK MTNDSLSQEVVKLRSQVESLNRKAQLQEIELERTTKQLKEAISIANEETAKCKAAKEVIKSLTAQLKDMAERLPIGATRN VRSPSLASFGSDLGSNDVTNATIDQLTIQTRSQESDLTGSNDQLLSNGSSTITNRSAGHGKHSQSNATSRNGYKTKDNES RNETEWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRLIDKSSIGVGSEELAH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 864 | 864 | 0.0 | – | |
| Phobius | 1 | 14 | 14 | - | – | |
| PANTHER | 1 | 864 | 864 | 0.0 | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| Phobius | 15 | 22 | 8 | - | – | |
| Phobius | 23 | 27 | 5 | - | – | |
| Phobius | 28 | 877 | 850 | - | – | |
| Gene3D | 32 | 254 | 223 | 1.2E-55 | ||
| SUPERFAMILY | 36 | 427 | 392 | 3.05E-98 | ||
| ProSiteProfiles | 37 | 98 | 62 | 11.63 | ||
| PRINTS | 82 | 95 | 14 | 7.0E-17 | ||
| ProSitePatterns | 85 | 95 | 11 | - | ||
| Pfam | 99 | 147 | 49 | 4.1E-12 | ||
| ProSiteProfiles | 99 | 150 | 52 | 15.107 | ||
| PRINTS | 101 | 117 | 17 | 7.0E-17 | ||
| Pfam | 150 | 202 | 53 | 3.5E-9 | ||
| PRINTS | 151 | 167 | 17 | 7.0E-17 | ||
| ProSiteProfiles | 151 | 205 | 55 | 14.544 | ||
| ProSitePatterns | 192 | 202 | 11 | - | ||
| PRINTS | 192 | 208 | 17 | 7.0E-17 | ||
| ProSiteProfiles | 206 | 257 | 52 | 12.836 | ||
| Pfam | 206 | 254 | 49 | 9.0E-13 | ||
| PRINTS | 208 | 222 | 15 | 7.0E-17 | ||
| ProSitePatterns | 244 | 254 | 11 | - | ||
| Gene3D | 255 | 436 | 182 | 1.7E-50 | ||
| Pfam | 269 | 318 | 50 | 9.1E-13 | ||
| ProSiteProfiles | 270 | 321 | 52 | 15.429 | ||
| PRINTS | 311 | 329 | 19 | 7.0E-17 | ||
| Pfam | 321 | 370 | 50 | 9.9E-8 | ||
| ProSiteProfiles | 322 | 373 | 52 | 13.338 | ||
| PRINTS | 369 | 390 | 22 | 7.0E-17 | ||
| ProSiteProfiles | 374 | 425 | 52 | 14.705 | ||
| Pfam | 375 | 422 | 48 | 2.8E-14 | ||
| SMART | 424 | 493 | 70 | 1.6E-18 | ||
| Pfam | 426 | 492 | 67 | 3.6E-13 | ||
| SUPERFAMILY | 426 | 493 | 68 | 1.34E-17 | ||
| ProSiteProfiles | 430 | 492 | 63 | 11.648 | ||
| CDD | 435 | 488 | 54 | 6.11324E-17 | – | |
| Gene3D | 437 | 493 | 57 | 2.8E-15 | ||
| MobiDBLite | 521 | 575 | 55 | - | – | |
| MobiDBLite | 530 | 546 | 17 | - | – | |
| MobiDBLite | 559 | 575 | 17 | - | – | |
| MobiDBLite | 602 | 632 | 31 | - | – | |
| Coils | 636 | 712 | 77 | - | – | |
| Pfam | 687 | 717 | 31 | 1.4E-16 | ||
| Pfam | 728 | 797 | 70 | 1.6E-21 | – | |
| MobiDBLite | 751 | 793 | 43 | - | – | |
| MobiDBLite | 751 | 808 | 58 | - | – | |
| MobiDBLite | 794 | 808 | 15 | - | – | |
| Pfam | 803 | 858 | 56 | 1.0E-27 | ||
| ProSiteProfiles | 804 | 859 | 56 | 33.941 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi6g1v0181100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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