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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0181100 |
| Transcript ID | LotjaGi6g1v0181100.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|K7MRH4|K7MRH4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:47307473..47315531) extracted from Lotus japonicus Gifu genome v1.2.
TTCTGCAGAACTAGTGGTTCCATGGTTGTTAAAAAAAAATTCCCCTCTGATTCTAGCTGCTTCTGTAGTGGACTAAATAT TTCATTTCCAAATAGAAAAGAGTGTTGGATAATGATCTTATTGTAGTAAATTATGTCATAAAGTTGTCTTTTAAATTTTC ATGTGTTGATATGCATTTATTCTATTTTTGTAGTTTGGTTGCCAAATATGCTGCTGACTATACTGACTATGCTTCTTTTC ATATCTGAACTACAGGCCATTACTGCATTGAAGAAAGGGGCTTACTTGCTCAAGTATGGAAGAAGGGGGAAGCCAAAGTT TTGCCCCTTCCGGCTTTCCAATGTGAGTTTTGTACTCCCTCCCTCTGCCATATGTGTGTGTGTGTGTGTGTGTGTATTAT ACGAGAAATAATTTCGTATGTAAGAGTTAGAGGAGTAAATCTTAACCACTAAATGTAGTTTCACCAGTCATCACTGTAAC ATTCGTGATGGAAATTTTGGGGGTGGGGTGGAGTCCTCTCTCAATCATGAGACTGATTATATCTGTGTTAGACACCTTGG GAAGCTTTGCCTTGCCAAAAATAGTTAATTCTTGTTAAAGGAAGCAATCTAATCTGCATAACTAGAATTAAAATTTGGAC TTAAGCAAATCTGCCGTTACCTTTATGACCATATCAAGCTTTGCTAAACGCTGTGGTTATTTGGGATTTGGCTACTTATA GAATCGGCTTGCTAGCATTCATTGCTTTGAAGTCTTATGAATTTTCTTATTGCTATAATTTTATTGTGGCTTATTATGCT TCACCTTCAATCCATTTTTTTTCTATCTTACATATAAAACATTTGTGTCTTCATCTTACCACTTTAGCTTGGGGGGGGGG GGGTAATTGCTTTATTTCATGTTATCAGAGCCTCATTGATCAAGTGGTCAGGAATTTTATCGCTGACACCTCTCCCATTC TCAAAATAAAAAAATTGAATTTCAGTACAAAGTTAGTAGAGCTATGCATAATTCATGATTTAAGCGTAAAGGACTCTTGC ATAAGGAAGATTGTTAGATAACCATTCACGAGCTTTCATCTAATGGCTTAGGTTTTAAGGATTTTTGAATCTTGAGTCTT GACATATTATTGGAGTCTATGTGATCAAGTGATTTAGGAGTTTGATCCTTGCTGACCCGATCCTTCTAAATAATAGTTGA TTTTCAAAATGAGCTTGCACATTATGCACACATCAACCCGGAAGGGCTGTAGCTTGGGGGAGCATGTTAGATATTTAAAA TAATTTGTGTTCCTTCAATTTAGAGCTTAAGCTTTTGGGTGTAATTGGTTGATGATAGTTTCCATGTATTGTCTTTTGTC AGAAGTTGTCTGGTTGTCAAAAGTTAAAAAATGTTTATTTTTTCTATTGCTTTCAGGACGAATCTGTCTTGATATGGTTC TCAGGAAAAGAAGAGAAACGTCTTAAACTAACTAATGTTTCTAGAATTATATCTGGACAACGAACGGTAAGTCCTTTAAA ATGACAATAATCATTGGTGCTATTTCACTGCTTCAGATTTAACCAATGGTGCCATGTCGTATTTAGATAATTAATTGTTG TAAGATATTTCTGTAATTTTTACTATTAATAAAATTACATTTTATGCATGCATTCTTTTGATCTCACGATTTTGCTCCTA GTTGAGATATATAAATAGGAATTGTCATTCACTGTCTATTTTCTACTTAGAACTTAGAAGCTTTATTTCTGTTATTATCT TGAATCTTTTCCAACATATACTTGTTTATGGGAGTTATAGGATGCTGTTTCCCTTTAGTGGAGATTTCAGATTGCCACTG ATGCTTAATTTGTTGGGGATGTGCATTATCCCTCTTCCCCTTGCTATAATTTTTGTCGTTTTCTCATAGTAACTATTATG CTGTTTCTTTCCATGAATATATATAAATGCTGATATACTTCTTTGCTGTCTTTTCGATTAAATTGTCATTTCTGTAAAAA CATACCAGAGTCATACGATGCAGATGTTCTGGTGAGCATGAGCATGGGTGTACTTTAGTTGTCAATACATTCATATTTCT TTCTTGACTTTGAGCCACTGCAGTGAATGCATCTCAACTGATAATGTTTCCTCATCTGTCACTGTTATGACTGATTACAT CCTTATTTTTTCAGCCTATCTTTCAAAGATATCCACGGCCTGAGAAGGAATACCAGTCATTTTCACTTATCTACAGTGAT AGGTCACTGGATTTGGTATAAATTTCTCATTCTCCCTTTATGGAAAATGACCCATATGTGCTGCATAGGAAAAGTGTCAT TTCAGTTCTTGGGTAACCAATATCTGATTGAAATGTATCAACTCAATTTATCAATGAAATACCTAAGTTAATCTCTATAA GGAGTTGTGGCAACTGGCAAGAATGTGTGCTACATTCATGGTTAAAACTGTGAGTAAATTTAGTTTAAATTCATTCTTAA TATTGTATAATCACAAACTTGAAATGGAAATATTTTCCGATGCTGCATTGATGGGTCATTTTCCCTCTTTAGGTGTATGC TTGGCCTGCTGCTTTGATTGGACAGTTATCATAGACATTATGAGCATTATTTAGGTATTTTGTTTGCATAAGCTTAATAA AGTCTTGTGATCTGTTTCTTCTCTACTAGATTTGCAAGGATAAAGATGAAGCTGAGGTTTGGTTCAGTGGGTTGAAAACA TTGATTTCACGCAGTCATAACCGGAAGTGGAGAACAGAGTCAAGAAGTGACGGCATTCCATCTGGAGCTAATAGTCCTCG AACGTACACTAGAAGTTCTCCATTGAATTCTCCATTTGGTAGTAATGAAAGCTTTCAAAAGGTATTAATATATGTGTCCT TTCATGTTCTCCCTGTTTGACTAGACTTCAGTTGAAGATGTTCACTGAAATTTTTTGTTTTCTCTATTCAGGATAGTGGG GATCATCTTCCTCTTCATAGCCCATATGAAAGTCCTCCCAAGAATGGTTTGGATAAGGCATTTTCTGATGTGATTTATTA TCCTCTTCCTCCAAAGGGTTTCTTCCCTCCAGATTCTGCCAGTGGTTCAGTCCACTCTGTGTCGTCAGTTGGATCTGATA GCATGCATGGTCACATGAAGACAATGCCTATGGATGCTTTTCGAGTTAGTTTATCAAGTGCTGTTAGTTCATCTAGCCAA GGTTCTGGTCATGATGATGGTGATGCCTTAGGGGATGTTTTCATTTGGGGGGAAGGCACAGGTGATGGTGTTTTGGGTGG TGGAGCTCACCAAGTTGGAAGTTGCTTTGATGCTAAAATGGATTCTCTACTGCCCAAAGCCTTGGAATCGGCAGTAGTTC TTGATGTACAGAATATTGCTTGTGGTGGTAAACATGCAGCCTTAGTGTCCAAACAAGGTGAAATTTTCTCTTGGGGGGAA GAATCAGGAGGCAGGCTTGGGCATGGCGTTGACTCTGATGTTCCCCATCCAAAGCTTATTGAATCTCTAAGTAGTACAAA TATTGAACTTGTAGCTTGTGGGGAGTATCATACATGTGCTGTGACACTTTCTGGTGATCTTTATACATGGGGTGATGGAA CTTACAATTATGGTCTTCTGGGGCATGGAAATCAGGTGAGCCACTGGGCCCCAAAAAGAGTACATGGCCTCTTGGAGGGC ATACATGTTTCTTCTATTTCTTGTGGTCCATGGCACACTGCTGTTGTAACCTCTGCGGGACAATTATTTACTTTTGGTGA TGGTACATTTGGTGTTCTGGGTCATGGAGACCGAAAAAGTGTTTCCCTTCCAAGAGAAATAGAGTCCCTGAAGGGTCTTC GCACTGTGCAGGCTGCTTGTGGTGTTTGGCATACTGCTGCAGTTGTGGAAGTCATGGTTGGAAATTCAAGTTCCAGCAAC TGCTCTTCAGGGAAGCTGTTTACTTGGGGTGATGGAGACAAAGGTCGGCTTGGGCATGGTGACAAGGAAGCCAAACTTGT TCCCACCTGTGTTGTAGCCCTACTTGAACCCAATTTTTGTCAGGTTGCTTGTGGTCATAGTATGACTGTTGCACTTTCTA GATCAGGCCATGTCTATACCATGGGCAGTTGTGTCTATGGTCAGTTAGGAAATCCTAAAGCTGATGGGAAGCTACCAACT CGTGTTGAAGGAAAGCTTTCAAAAAGCTTTGTGGAGGAAATAGCTTGTGGTGCATATCATGTTGCGGTTTTAACTTCAAG GACTGAAGTTTACACTTGGGGTAAGGGTGCAAATGGTCGTTTAGGCCATGGAGATACTGATGATAAAAACTCCCCAACAT TAGTAGAAGCATTGAAAGACAAACAAGTCAAAAGTATTGCTTGTGGTACAAATTTCACCGCAGCCATATGCCTGCATAAG TGGGTATCTGGTGTTGACCAATCCATGTGTTCTGGTTGCCGTCTGCCATTTAATTTCAAAAGGAAACGCCACAATTGTTA TAATTGTGGACTTGTTTTTTGCCATTCATGCAGCAGTAAGAAGTCTGTTAAGGCATCAATGGCACCAAACCCCAACAAAC CGTATCGTGTCTGTGATAGTTGTTATAATAAGATAAAGAAAGCTACAGTGACTGATTCTTCGTCTCAGTCTTCAATGAGC AGAAGAGGAAGTATTAATCAGGGGTCACTTGAGTTTGTTGGTAAGGATGATAAATTGGATTCCAAATCAAATAATCAGAT TGGCAGGTTCTCTTCAATGGAATCCTTGAATCAAGTGGACAGCAGATCTTCAAAGAAAAATAAGAAATTGGAATTCAACA GTAGCCGTGTCTCGCCTGTTCCAAATGGAGGTTCACAATGGGGAGCAAGGAATATTTCCAAATCTTTTAATCCTGTTTTT GGATCATCAAAGAAGTTTTTTTCAGCTTCTGTTCCTGGATCTAGAATTGTTTCCCGGTCAACATCCCCAGTATCTAGACG GCCTAGTCCACCTCGTTCAACTACTCCAACCCCAACGCTGGGAGGACTTACATCCCCGAAGATGGTCGTGGATGATGCCA AGATGACCAATGACAGCCTCAGTCAAGAGGTTGTTAAATTAAGATCACAGGTATTTTATTTTATGCCTACATTGATAGAC GATGTACCCTTTCTGAGATTTTTTTTTTGAATAGTTTTAATGTGGCACCCCTTTCTGTATTTGAACTAGTTTTTCTTTTT TCCTTTTTGGAAATGGAATTATGGATTATAGCCAAATGGCCCAACCAAGCCATCATGAGGAAAAAAAGGCCAAGCATGAA GTTTGACACTAGTTGTTTGCTATTAAGCTTGAATTGGTGCTAGTAAAATGCATATTTTAATTGAAAGTGACTTAATTACT TGCTGTATTGTCTGGTTATGGTTAGAGGTGAATAACAGTCTCAAAATCCACAAGAATTTAAAATTTATGTATGTGTAGAG ATTTAGTATTGCCATGCAGATTTTACTTTTTAATATTGTCATGTCAGAGTATGTGTGGCATGTAAGATGTAACTACTTCA GGTAGGGCCATCATGATCAAAGCTGGCTCAGGAACTTAGAGTCTAAGACTCAGTTTGCTAACAGCTCAATAAGCTAGGCT CTTTAACTTAGTGAGCGGGCTTGATTTGAAAATTTCGACTTTAGTAAAATGAAAACCGAGCTTGAGCTTTTATAGATTTG ACTTAGCTTGGCTCATTGCTAGTCCTTGTTTAAGGTGGTTAGATTCTGCTTATAAGCTTTTATTTCACGTAAAGGAAGGT GATTTTGTAACCAAGAGAACCAGAGGAGTTTTAGCTAGTAGCAACAATTGGGTTAAATTCGCTAGGAGTGCACTAAATGA CATGGGTTTCACTCTGTATTTGGTGGGAGCTATGTGAGTTGCACCACATAATGGTGTATTAGAGAGTGACTTGCAAGTAT GTCTCTTACAATCAAATGTGCTGTGCACACATTTGATGATACCTACTTTTATTCCTTGGTTGGTTTTTGTTAAATTTGAG TTGATCCAGAAATTAACTGGGGACTTTTCCTTACCTTTTTTTACATGGTTCAGTTAATCTATTTGGAAGAGCTTCTTCTG ATCACTTATGAAACATTTTTTCATAAACAACAGTTGGAAATATGATACCTATATTTTACTGTCATGGGAAAGAAAATGAT TGCTTTCTCCTCCTTTCCCCTTATTTTTCTAAGCCACTTTGCTCACTTGGTTATCTAGCCTGATGAGTTTTCTCCCACTT TAGGTGGAAAGCTTGAATCGGAAAGCCCAGCTTCAAGAAATTGAGTTGGAAAGAACAACTAAACAGCTAAAAGAAGCAAT ATCAATTGCCAACGAAGAGACTGCCAAATGCAAAGCAGCAAAGGAAGTGATCAAGTCGCTTACTGCCCAGGTAAAAATTC TAATTCCTTGAACCATGTTTAACAAACTAGATTCCTTGCGGCAAAAGGCCCTTACACACTCATGATGCAAATACGATGGA CCGAAAAAAATTTATTTCCTTGCACTCAACTAGAACAAATTTTGAGTACTATTGTAGTACACTGATTACTTAGAGCTCCC TCTAACAAATTGAATGATATCTCTTTTATCTTACTCTAAAAATAAAAGGAAAAACTACTAACCATATATTATATGGAGTT TAGCACATATGAAAGTTTTTCCCTGAACTGGGTTCACACACGGAATAGTGGTTGGTTAACTTTTTCCTTTTCCTTTTAAA GAACCTAACTACTATCTCCTTGAAAAACCTTATTCAAGCAGATGCTACGCCTATGTAAGTTTTCATAAGTTGTTTGGTTC ACCTTGTCGAACTCAACAAGTTCAGTAGAGAAGGTGGACTAATAGGTGAATGTTTTTTAGATGAGGATATATAAATGTGA TTGTCACTTGTGAGACCAGCATGATTCCCTTGATGGTTGGTGTCTCTTTAAATAAATGTGTTTCTTTCTTCTTTGGTGTT AGAGTTGACACTTATACTAGAGTGCTCAAACTTGGGGACTTTTAGTCCAGAGTTAAATTAACCAGGACTAGCCTTCTGGA AAAATAAATATAGGCCTAAAATTTAGGAAAATCTTGTAAAATAAAGTTCATACGTTGATTTGATACAAGTGTCTGCCTAA ATTTAATAATGCAATATAATTTCCTAAAATAACTCTAGGATATTAGCACTGATAGTGTAAGAATGAGCCATAACAGTTTG GCCCAGCATCAATACTAAACCAGAGGATTTCGATTTAAGCTTGTCTTATAGACTTGTACTAGGTGTATAAGAACTAGTCT CATTGATCATACACTTTGTTTCTTGATCTGTATAGTTGAAGGACATGGCCGAGAGGCTGCCTATAGGAGCAACCAGGAAT GTTAGATCACCATCTCTTGCTTCCTTTGGTTCCGACCTTGGTTCCAATGACGTTACCAATGCTACGATTGATCAATTGAC TATTCAAACAAGAAGCCAAGAGTCAGACTTAACAGGATCAAATGACCAGTTGCTTTCAAATGGATCAAGCACTATCACCA ACCGTAGTGCAGGTCACGGTAAACACAGTCAATCAAATGCAACTAGCAGAAATGGGTACAAAACAAAGGATAACGAGTCT CGAAATGAAACTGAATGGGTTGAGCAAGATGAACCTGGTGTATACATTACTCTCACCTCTCTACCAGGAGATGTAATAGA TCTTAAGAGAGTTCGCTTCAGGTATGGAATGCTCTATTGCATTGATGTTGTGTTTTTGTCAACTTTCATTATTTACTTTC CAAAATTTGGTATAGTATGATACAAATAGTGTCATTCCTTTAATTCAATATCTGATGGGGAAACAAAGACTTTACTAGCA AGTAGCAACTAAGATAATTATGTTATATTTCATACATAGGCCATGTTATATAACCTGGGCTTTAACCTTTGCATTGGTGG ATGCAGTCGAAAGCGGTTTAGTGAGAAACAAGCAGAACAATGGTGGGCTGAGAATCGGGCAAGAGTATATGAACTGTACA ACGTGCGCTTGATTGACAAGTCAAGTATTGGTGTTGGGAGTGAGGAACTGGCTCATTGA
CDS sequence (LotjaGi6g1v0181100.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGCTGACTATACTGACTATGCTTCTTTTCATATCTGAACTACAGGCCATTACTGCATTGAAGAAAGGGGCTTACTT GCTCAAGTATGGAAGAAGGGGGAAGCCAAAGTTTTGCCCCTTCCGGCTTTCCAATGACGAATCTGTCTTGATATGGTTCT CAGGAAAAGAAGAGAAACGTCTTAAACTAACTAATGTTTCTAGAATTATATCTGGACAACGAACGATTTGCAAGGATAAA GATGAAGCTGAGGTTTGGTTCAGTGGGTTGAAAACATTGATTTCACGCAGTCATAACCGGAAGTGGAGAACAGAGTCAAG AAGTGACGGCATTCCATCTGGAGCTAATAGTCCTCGAACGTACACTAGAAGTTCTCCATTGAATTCTCCATTTGGTAGTA ATGAAAGCTTTCAAAAGGATAGTGGGGATCATCTTCCTCTTCATAGCCCATATGAAAGTCCTCCCAAGAATGGTTTGGAT AAGGCATTTTCTGATGTGATTTATTATCCTCTTCCTCCAAAGGGTTTCTTCCCTCCAGATTCTGCCAGTGGTTCAGTCCA CTCTGTGTCGTCAGTTGGATCTGATAGCATGCATGGTCACATGAAGACAATGCCTATGGATGCTTTTCGAGTTAGTTTAT CAAGTGCTGTTAGTTCATCTAGCCAAGGTTCTGGTCATGATGATGGTGATGCCTTAGGGGATGTTTTCATTTGGGGGGAA GGCACAGGTGATGGTGTTTTGGGTGGTGGAGCTCACCAAGTTGGAAGTTGCTTTGATGCTAAAATGGATTCTCTACTGCC CAAAGCCTTGGAATCGGCAGTAGTTCTTGATGTACAGAATATTGCTTGTGGTGGTAAACATGCAGCCTTAGTGTCCAAAC AAGGTGAAATTTTCTCTTGGGGGGAAGAATCAGGAGGCAGGCTTGGGCATGGCGTTGACTCTGATGTTCCCCATCCAAAG CTTATTGAATCTCTAAGTAGTACAAATATTGAACTTGTAGCTTGTGGGGAGTATCATACATGTGCTGTGACACTTTCTGG TGATCTTTATACATGGGGTGATGGAACTTACAATTATGGTCTTCTGGGGCATGGAAATCAGGTGAGCCACTGGGCCCCAA AAAGAGTACATGGCCTCTTGGAGGGCATACATGTTTCTTCTATTTCTTGTGGTCCATGGCACACTGCTGTTGTAACCTCT GCGGGACAATTATTTACTTTTGGTGATGGTACATTTGGTGTTCTGGGTCATGGAGACCGAAAAAGTGTTTCCCTTCCAAG AGAAATAGAGTCCCTGAAGGGTCTTCGCACTGTGCAGGCTGCTTGTGGTGTTTGGCATACTGCTGCAGTTGTGGAAGTCA TGGTTGGAAATTCAAGTTCCAGCAACTGCTCTTCAGGGAAGCTGTTTACTTGGGGTGATGGAGACAAAGGTCGGCTTGGG CATGGTGACAAGGAAGCCAAACTTGTTCCCACCTGTGTTGTAGCCCTACTTGAACCCAATTTTTGTCAGGTTGCTTGTGG TCATAGTATGACTGTTGCACTTTCTAGATCAGGCCATGTCTATACCATGGGCAGTTGTGTCTATGGTCAGTTAGGAAATC CTAAAGCTGATGGGAAGCTACCAACTCGTGTTGAAGGAAAGCTTTCAAAAAGCTTTGTGGAGGAAATAGCTTGTGGTGCA TATCATGTTGCGGTTTTAACTTCAAGGACTGAAGTTTACACTTGGGGTAAGGGTGCAAATGGTCGTTTAGGCCATGGAGA TACTGATGATAAAAACTCCCCAACATTAGTAGAAGCATTGAAAGACAAACAAGTCAAAAGTATTGCTTGTGGTACAAATT TCACCGCAGCCATATGCCTGCATAAGTGGGTATCTGGTGTTGACCAATCCATGTGTTCTGGTTGCCGTCTGCCATTTAAT TTCAAAAGGAAACGCCACAATTGTTATAATTGTGGACTTGTTTTTTGCCATTCATGCAGCAGTAAGAAGTCTGTTAAGGC ATCAATGGCACCAAACCCCAACAAACCGTATCGTGTCTGTGATAGTTGTTATAATAAGATAAAGAAAGCTACAGTGACTG ATTCTTCGTCTCAGTCTTCAATGAGCAGAAGAGGAAGTATTAATCAGGGGTCACTTGAGTTTGTTGGTAAGGATGATAAA TTGGATTCCAAATCAAATAATCAGATTGGCAGGTTCTCTTCAATGGAATCCTTGAATCAAGTGGACAGCAGATCTTCAAA GAAAAATAAGAAATTGGAATTCAACAGTAGCCGTGTCTCGCCTGTTCCAAATGGAGGTTCACAATGGGGAGCAAGGAATA TTTCCAAATCTTTTAATCCTGTTTTTGGATCATCAAAGAAGTTTTTTTCAGCTTCTGTTCCTGGATCTAGAATTGTTTCC CGGTCAACATCCCCAGTATCTAGACGGCCTAGTCCACCTCGTTCAACTACTCCAACCCCAACGCTGGGAGGACTTACATC CCCGAAGATGGTCGTGGATGATGCCAAGATGACCAATGACAGCCTCAGTCAAGAGGTTGTTAAATTAAGATCACAGGTGG AAAGCTTGAATCGGAAAGCCCAGCTTCAAGAAATTGAGTTGGAAAGAACAACTAAACAGCTAAAAGAAGCAATATCAATT GCCAACGAAGAGACTGCCAAATGCAAAGCAGCAAAGGAAGTGATCAAGTCGCTTACTGCCCAGTTGAAGGACATGGCCGA GAGGCTGCCTATAGGAGCAACCAGGAATGTTAGATCACCATCTCTTGCTTCCTTTGGTTCCGACCTTGGTTCCAATGACG TTACCAATGCTACGATTGATCAATTGACTATTCAAACAAGAAGCCAAGAGTCAGACTTAACAGGATCAAATGACCAGTTG CTTTCAAATGGATCAAGCACTATCACCAACCGTAGTGCAGGTCACGGTAAACACAGTCAATCAAATGCAACTAGCAGAAA TGGGTACAAAACAAAGGATAACGAGTCTCGAAATGAAACTGAATGGGTTGAGCAAGATGAACCTGGTGTATACATTACTC TCACCTCTCTACCAGGAGATGTAATAGATCTTAAGAGAGTTCGCTTCAGTCGAAAGCGGTTTAGTGAGAAACAAGCAGAA CAATGGTGGGCTGAGAATCGGGCAAGAGTATATGAACTGTACAACGTGCGCTTGATTGACAAGTCAAGTATTGGTGTTGG GAGTGAGGAACTGGCTCATTGA
Protein sequence (LotjaGi6g1v0181100.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLTILTMLLFISELQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLKLTNVSRIISGQRTICKDK DEAEVWFSGLKTLISRSHNRKWRTESRSDGIPSGANSPRTYTRSSPLNSPFGSNESFQKDSGDHLPLHSPYESPPKNGLD KAFSDVIYYPLPPKGFFPPDSASGSVHSVSSVGSDSMHGHMKTMPMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGE GTGDGVLGGGAHQVGSCFDAKMDSLLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPK LIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVTS AGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG HGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGA YHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFN FKRKRHNCYNCGLVFCHSCSSKKSVKASMAPNPNKPYRVCDSCYNKIKKATVTDSSSQSSMSRRGSINQGSLEFVGKDDK LDSKSNNQIGRFSSMESLNQVDSRSSKKNKKLEFNSSRVSPVPNGGSQWGARNISKSFNPVFGSSKKFFSASVPGSRIVS RSTSPVSRRPSPPRSTTPTPTLGGLTSPKMVVDDAKMTNDSLSQEVVKLRSQVESLNRKAQLQEIELERTTKQLKEAISI ANEETAKCKAAKEVIKSLTAQLKDMAERLPIGATRNVRSPSLASFGSDLGSNDVTNATIDQLTIQTRSQESDLTGSNDQL LSNGSSTITNRSAGHGKHSQSNATSRNGYKTKDNESRNETEWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAE QWWAENRARVYELYNVRLIDKSSIGVGSEELAH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 17 | 17 | - | – | |
| SignalP_EUK | 1 | 17 | 17 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 2 | 12 | 11 | - | – | |
| Phobius | 13 | 17 | 5 | - | – | |
| SUPERFAMILY | 15 | 94 | 80 | 1.29E-12 | – | |
| CDD | 15 | 95 | 81 | 1.49085E-31 | – | |
| PANTHER | 16 | 75 | 60 | 0.0 | – | |
| PANTHER | 16 | 75 | 60 | 0.0 | – | |
| Phobius | 18 | 1073 | 1056 | - | – | |
| PANTHER | 76 | 1060 | 985 | 0.0 | – | |
| PANTHER | 76 | 1060 | 985 | 0.0 | – | |
| MobiDBLite | 101 | 156 | 56 | - | – | |
| MobiDBLite | 109 | 140 | 32 | - | – | |
| Gene3D | 183 | 356 | 174 | 3.2E-29 | ||
| SUPERFAMILY | 232 | 623 | 392 | 3.66E-98 | ||
| ProSiteProfiles | 233 | 294 | 62 | 11.63 | ||
| PRINTS | 278 | 291 | 14 | 2.6E-16 | ||
| ProSitePatterns | 281 | 291 | 11 | - | ||
| ProSiteProfiles | 295 | 346 | 52 | 15.107 | ||
| Pfam | 295 | 343 | 49 | 5.2E-12 | ||
| PRINTS | 297 | 313 | 17 | 2.6E-16 | ||
| Pfam | 346 | 398 | 53 | 4.5E-9 | ||
| ProSiteProfiles | 347 | 401 | 55 | 14.544 | ||
| PRINTS | 347 | 363 | 17 | 2.6E-16 | ||
| Gene3D | 357 | 621 | 265 | 1.1E-77 | ||
| PRINTS | 388 | 404 | 17 | 2.6E-16 | ||
| ProSitePatterns | 388 | 398 | 11 | - | ||
| Pfam | 402 | 450 | 49 | 1.1E-12 | ||
| ProSiteProfiles | 402 | 453 | 52 | 12.836 | ||
| PRINTS | 404 | 418 | 15 | 2.6E-16 | ||
| ProSitePatterns | 440 | 450 | 11 | - | ||
| Pfam | 465 | 514 | 50 | 1.2E-12 | ||
| ProSiteProfiles | 466 | 517 | 52 | 15.429 | ||
| PRINTS | 507 | 525 | 19 | 2.6E-16 | ||
| Pfam | 517 | 566 | 50 | 1.3E-7 | ||
| ProSiteProfiles | 518 | 569 | 52 | 13.338 | ||
| PRINTS | 565 | 586 | 22 | 2.6E-16 | ||
| ProSiteProfiles | 570 | 621 | 52 | 14.705 | ||
| Pfam | 571 | 618 | 48 | 3.5E-14 | ||
| SMART | 620 | 689 | 70 | 1.6E-18 | ||
| Pfam | 622 | 688 | 67 | 4.7E-13 | ||
| Gene3D | 622 | 692 | 71 | 1.8E-16 | ||
| SUPERFAMILY | 622 | 689 | 68 | 1.73E-17 | ||
| ProSiteProfiles | 626 | 688 | 63 | 11.648 | ||
| CDD | 631 | 684 | 54 | 3.60133E-17 | – | |
| MobiDBLite | 717 | 771 | 55 | - | – | |
| MobiDBLite | 726 | 742 | 17 | - | – | |
| MobiDBLite | 755 | 771 | 17 | - | – | |
| MobiDBLite | 798 | 828 | 31 | - | – | |
| Coils | 832 | 908 | 77 | - | – | |
| Pfam | 883 | 913 | 31 | 1.8E-16 | ||
| Pfam | 924 | 993 | 70 | 2.1E-21 | – | |
| MobiDBLite | 947 | 989 | 43 | - | – | |
| MobiDBLite | 947 | 1004 | 58 | - | – | |
| MobiDBLite | 990 | 1004 | 15 | - | – | |
| Pfam | 999 | 1054 | 56 | 1.3E-27 | ||
| ProSiteProfiles | 1000 | 1055 | 56 | 33.941 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi6g1v0181100.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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