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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0318100 |
Transcript ID | LotjaGi2g1v0318100.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Threonine--tRNA ligase; TAIR: AT5G26830.1 Threonyl-tRNA synthetase; Swiss-Prot: sp|O04630|SYTM1_ARATH Threonine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr|A0A0S3T3W6|A0A0S3T3W6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0318100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:79302478..79310414) extracted from Lotus japonicus Gifu genome v1.2.
ATGCTATGCTCTCTAATCCGTTTGCGCCGTTACGCCGCTGCTTCACCCTCTCTTCTCCTCCACCACAACCACCACAATAA CCGCTTCTACTCCTCTCCTCCTCCTCCTCCTCCCTCCGCCATGGTTGCTCACGCGAAAGACGATGCCTACCTCACCGCCG CAATCCCAAAGCGCATCAGCATGTTCGAGGCGATTCAGGCTGAACAGCGCACACTCCGGTTAACCCTATCGCCGGATCCT ATCAAGGTCACCCTCCCCGACGGCAGCGTTAGGGATGCTAAGAAATGGCAGACCACTCCCCTCGACGTTGCTCGCGACAT CTCCAAGAATTTGGCTGCTAACGCTCTCATCGCTAAGGTCAATGGCGTTCTCTGGGACATGGCTCGTCCTCTCGAGGAGG ATTGCGAGCTCCAGATCTTCAAGTTCAATGATGATGAAGGAAGAGACACTTTCTGGCATTCCAGCGCTCACATTCTAGGC CAGGTTTCACTTCTCATTTCTCTTTGTTTCGTTTTCAATTCGAATCATAGCATTGAGAATGATGATTCTGATTTTGTTTT TGGTTATTTGTAGTCTCTTGAGACTGAGTATGGATGCAAGCTTTGCATTGGGCCTTGTACTACAAGAGGAGAGGTGAGTT TGTGTTTGCACGCGTACTGTTTGTTGAATTGTCTTCAGCATTTTTTAGGGATACTGAATAAGAATGTTAATGTATTTGTT TAGGGATTCTATTACGATGCGTTTTACGGCGACCTGGGTCTGAATGATGATCATTTCAAGCAAATTGAGGCTGGGGCATT GAAGGCTGCTGCGGTATCGTTTTCGCTTCATTGTCTTGTGCCTTTCTTTTATTCATTTTCTTAAGTTTCCTGCTATAGCT GCTCTGTTTCTATTGGTGAAAAATAGTTATTTTTTTTTACCTGATTATGTTAATTTCTTATTGAAGCTAATGGGTTCCGT GCAGTAAATTTGATTCCTAAAGCAAATCTAATCATTTCTTATTTGATCTAGTTGTTATTTTCCATTTTTCAACGCGTGTC CGAAATTCTTCCTTACTCTTGTCTTTAAAATTCTCACATTGCATTTCGTGAATGCTAATTCTCATTGTTATGATGATAAG CATTATATTTGTGGTAGTTTATAAATGTGATGTATAATAATGGTTTATATTTGCAGGAAAAACAACCTTTTGAGCGAATT GAAGTTACCCGTGATCAGGCTCTTGAGATGTTTTCGGAGAATAAGTTTAAGGCAAGTTTTTTTTGGTGATTATTTTCTTA TTTCTGTGACATTTAATATTATCTTATTCATCATGTAATCATACAGATCTGAACCATGTTTCCTATTTTATTTTGCCTAT AATGTATGAGATCACAATTTGCTGCATTGGCTTACTTGGGTATTGTTATCAGATTGAAATTATCAATGATTTGCCAGCTG ACAAGACTATCACGGTATACAGATGTGGTCCCCTCGTTGATTTGTGTCGTGGACCACATATACCTAATACATCCTTTGTC AAAGCAATTGCATGTTTAAAGGTTAGTGTTTGATCTTTCTTATAAAGCCATTTTTTATTTTGATTTATCCATTAACTTAT ATCAATGCATGTATTTTGATTATTGGGGTTGCAATTACAGGCTTCATCAGCATATTGGAGGGGGGACAAAGATCGTGAAA GTTTACAAAGAGTTTATGGCATATCTTATCCTGATCAGAAGAGTTTAAAGGTGATTTTCAATCATAAGTTAGTTATCATA GGTCTGAAATCTGAATGTTCAGTTATAGTTCTTTGTGGATTATGTAAAATACTATTAGTTGTCAATAGTGTGCTATAGCA TTTACAAGTGTTATAGCTCCTTTTCACTATGCTATTGCTACATGCTTACTTTGGTATTTGGAAACGAGGCTTGGATTGTG CTGCTATTTGCAATAAATGGATAACTAATCTATAAGGCTTAATAATGTGCTATAGTGTTTATTGGCGCCCTAGCTTCTTT TGCCAGGGTGGTTCTTTAGCGTGGTGTTTTTGAAGTAGTTTGTGGACTATGCTTGTATCCTGTGGCTATAGGCCTATAGC AGAGTAGCGTTTGGCATCAATTACAAGTGTTATAGCTCCTTTTCACTATGCTATTGCTACATGCTTACTTTGGTATTTGG AAACGAGGCTTGGATTGTGCTGCTATTTGCAATAAATGGATAACTAATCTATAAGGCTTAATAATGTGCTATAGTGTTTT TTGGCGCCCTAGCTTCTTTTGCCAGGGTGGTTCTTTAGCGTGGTGTTTTTGAAGTAGTTTGTGGACTATGCTTGTATCTT GTGGCTATAGGCCTATATCAAAGTAGTGTTTGGCATCAATTATAAGAGAAAGACAACAACATTCATTTTCTATTTTGAGT CATCACATTAAAGTATTAGGGCGACACTTGAAAATTCCATTATGATTTTATTATTTGATTATTTCATTTTCTATTCTTTT CAGGAATATTTGCATAGGCTGGAAGAGGCTAAAAAGTATGATCATAGGATTTTGGGTGTGAAGCAGGAGCTTATCCTTCA TCATGAATGGAGGTAAAGTGGTTCCATTCTTGTCTGATTGCATGTTTTAGTAACCTTCTCTTACTGATACGACTTGGTCT GTCTTTATGTTAGCCCGGGAAGCTGGTTTTTCCTTCCACATGGTGCTCGAATCTACAACAAACTCATGGATTTCATTCGA AATCAGTACAGAGATCGGGGCTATCAAGAGGTTAGGTTTTAGCGTAGAAGTTTGTTGGTATAATAAAGAGCAATCTTTCA CCAGGTACTAAGTACTACCTACTTTGAGTCATTAGGTCATATCCCCGAATGTATTTAACATGGAGTTGTGGGAGAAATCT GGTCATGCTGCAAACTATAGAGAGGATATGTTTGTCTTTGAGGTATGCTTCTACCCCATATTTATTGTTTATATGCATGT TTTGGAAGAGTCAGTTGGATGTCATATCTTTTTACCTTCCGAACGGACATTTCTTCTGAAAGAAATCATGTTATTTAACC AAAGTGTATTATTTTTTATGTGTTCTAGATTGACAAACAAGACTTTGGTTTGAAACCAATGAATTGCCCAGGGCACTGCT TGATGTTTCAGCACAGGGTTAGATCATATAGAGGTAATTTTCATCTACACTGACAAAATAGTGCCTTTTTTAAGTCTTCA AATAGTGCCTTTTTTAAAAAATTCTACTTGGGGTGGCTGAGCTAGCTTAGATTTTACTGTTGAGTTTAGCATAATGCACC TATCTTAGCTGCTAGATTAATGGATTTACAGTTGAGTCTGCCTGTACAGGGAAATACCTTTGATTCATTTTGTGAGGCTT CATCTTTCCTCCTCCTATTTAAGTTAATAATCTTCCTAGGAGGATGAAAAAAAGGGAGGGATGATTTTTTTATGTTGTAT TCTTACATATAATATAATGTTCGCATATAGAGGAAGATTTTTTCAGTTAGTTATGTGTTCCAATTTTGATCTGGACTACA AAATATACCTGTGGGGAGGTAGACCTGGGCTTGACTTGTTTTATGTGAACTAAATCTATAATTTGATATTTGATGCTAAT GCTCCATGAGTTTGAGTGCATAGTTTGAAGATGTGAAGTTTGTTTTGCTTGTCTTTTTGTATATTTATGTTATGTCTTAA CTTTTTACCGGTTCTACAGAACTCCCACTTCGCTTCGCTGATTTTGGGGTTTTGCATCGGAATGAGGCTAGTGGTGCCCT GAGTGGATTAACACGTGTCAGGAGATTTCAGCAGGTAATCCTTTTTTTAGTGGTTATATTTCCAAATAAAGTTAATTTGC TGTTTTTGTTACCAGGGATCACATTCATATTTATGTGAAGGCACACATTGAATTCATTCGACCTTTTAGGCATATACACA ATATACAAAAAATTCTTAAGGGATTTTGCTAAGAACCGACCCCCTATAGAAAGGGTATATGAAAGAAGATCTAAGAGAAA TGTTGGGGATAATGTTTCCAGCTCTTAGAAGAGCATTAATTGTAACAGGTTTGGTAACCAAGCTGTTAGGGCAGTTAGAA GTTATTTACATGCGGCTAACAACCATGTAATGAGAGGACTAGACTTTTGAACAACCAGGGATTATCACTATCAGTTTATT CTTTCTTCTTCAGATTTCAGCCATAGCCACTAGGTTACTTTCTAATAAAATTCTCATCTTTTCTATTCTTCTAATACCGG TCTTCAATAGATTTTCAACTCATGTTGGGGTCTCACTAATCTTCTGCTGCAATTTGGTAGATAAAATGTTATTAGATGGT CATGGATTTGAAAATGTTAGTTCTTTAAAACAAATGAAGGAACATTGCAAGCCAGTGATCTTGATCCTTCTCCTCATCTT TAGTTTCTATTTCTATATTTATACTGTTAGAGGTGCCATATTATTAATGGTGTTTGCTTTACATTTTGCACAGGATGATG CACATATTTTCTGCAGGGAGTCTCAGGTGAGTTGAGCTTAAATTTATACAACATAACTCTTTGTAGTCTTTTTTGTGCTG AAGTTAAAATTATTTATTTGATTCATTATACAGATAAAGGAAGAAGTCAGAAAAGCCTTGAATTTCATCAATTATGTTTA TGAAGTTTTTGGTTTCACATATGAGCTGAAACTTTCAACGGTATGCTTTTGCTCTTTATGGTTCTAAATGCTGATGTACC TTTTTAAATGCTTTCATGGTTTCATAAACCCTAGTTTCAAATACGAGTCTTCAAATGAAGGCTCCTTCAATAACATCTTA ATGTTTGTCTATGAACTGTTTGGATTTTATAATGAAATCTCATCTTCTTTGATGATTTCTGCACTGGTAGTATAGAGTTC TCATTGTTCTCTCTCTCTCTCACACACACATTGGTGTTAACTTTCCTACGAAAGTTAGGCAAAAAAAAGCTGGAGATCAT GTAGTAAATTTTAAGTCACAAAATGAGTGACATTCTATTTCTAGAAAATACCTACTAGACTTATGTAGCATTTATGCTCA CATAACCTCTACATATTTCTTTTTCCTTTTTTATCCGGGTTTCCAGCTAAAGTAAGAAAAGAGAAAGTCTTGACCAACCT TTACCTTTTTTTCACTCTTTGAGAGTACTTCTATTTAATGCTTTACCTATATTTTCCTTTGCCTGTGTTAAATACTTGAC CAGAGGCCAGAGAAATACCTAGGAGAGTTGGCAACATGGGAGAAGGCTGAAAACGCTCTTAAAGAAGCTTTGGACGAGTT TGGCAAGCCTTGGCAGGTATTCTACAAGTCTTTCATATTAGCATTATAGAGCTTAAGATATTGCTTCAAACATATGTTTA TAATTCTGATTAGAGCTAATTCAAAATGGACACCTAGAAGCCGAGTTTTCCTATCATGTTTTAAATTCAATCATAGGTTT ACTAGATAGTAGATACCAATATTATTTTCTCTCACATGGCATTTTAGTTTTCAAACACCTATTATATTTTCTATGGAACG TGACATTTGTTAGGCAGAATATATTTTTGCTTATATTCTGAGTAAAACTTTGCAGTTGAATGAAGGGGATGGTGCATTCT ATGGACCTAAGATAGACATCAGCGTATCTGATGCATTGAGTCGAAAATTCCAGTGTGCAACTTTGCAGGTTTACACAGTT TAGCTTGATTTGAATTCACATAATTCAGTTTTGGATAACTTCTCAACTGATAGTTTGATGAATGTTGTTGCTTTCAGCTT GACTTCCAGCTTCCTGATCGATTTAAATTGGAATACTCAGCTGAGGATGAAGCCAAAATTGAGAGACCTGTTATGATTCA CAGAGCCATTCTAGGATCTGTTGAGCGCATGTTTGCCATTCTTTTAGAGCACTACAAGGGTAAATGGCCCTTGTGGCTCA GTCCTCGTCAAGCAATTGTATGTCCTGTGTCAGAGAAATCACAAGCTTATGCACTGCAGGTTCATAGCTCTAACTTTTGG CTTTATTTTCTTGTATTTTTGTCCTTTTAAGTTATTACATATCATGGGATCACGCTTTTAATCTCCTTGAAGGGGACATT TTTGTTACACCCCTTCTACTTTTTTATGCTTGTCTAATCAGTCTTTTACTTTTCATGGAGCTGATACAAAGTTTACTTCC TCTTTGTTGTTTTTAGTACTGCTGAGCTTGTCTGAATCTCCCTGAAATAATGTTTTTCTTTATTGAGAGTATGTTATTGT GTTTTCATGCGTTTTTATGTAAACATGTCCGGTGGTACTTCTTGAAGTTCGAGCAATCTTCCTTGGATGGCTTAACTTCT CAGTGTTCTGTTTGTAACTTTTCTTGGGATACTTGTATTATTATATGATGTGAAAAGCAAGACACTTAATCATTGTATAT TTGTAAAACATATATTTGTTCTGCAATTTTCTAGGTGCGAGATCAGATCCACCAAGCAGGATATCACGTTGATGCTGATA CAACTGATCGGAAGATTCAGAAGAAGGTAACATAAACCTTTAATACCAATAATTTGTGTATGTGTTTGTTCATTCAGAAC ATAATAGTGCTGCTGACACTGTTTTGGTCTACCGCCGGATCAAATTTGACGGTTAATTTGTGTTTACATTAGACATATTG AGAAATCAGTATTCCTACTGTTCATACATCATATTGGTTAGTGTTAAAATAGAACCTTGGTTGGTTCCCAAAGTGAATTT CGTATCACCTGGTGCTTTTTTTTCCTGCCCGAAGTTGTAGTCACTAGTCACTTACCTATGAGTTGTGTGTATTCAGTTGC AGCTTATCCATGTGAACAATAACGTTTGATATATTCCACCCTTATTCATGTGGTGTGACAGCTTTTTTGGTCATACAATT GCATCTCTATCCTGCATTCATAAAAGGCTAATTAAATGCCAAGTGAAAAGTTCTCTTATTTACTTTTGTATGGAACTAAT TTAATGTCTTTATAAGAGACTTGTATTAACCAGTGTTGTTAATGGCGGATAGCGTCGCGTAGCGGCGAGCCCGAAATCCG CAATAGCGCTATAGCGTGTAGCGCTATGGCCGCTACGCTGAAGGAGGAGGAGGAGGAAGGAGGAAGGAGGAAGAAGGAAG GAGCAGGTCTCTGTTTTCTTCGTGAAAAACAGAGGAGAACGCAGGAGCAAAGGTTGAAGAAGATTAAAAACGTGAAAGCC CCAGAATGCCCTTAAAATTTCTAAAATAATGTTTAAATCTGTGGGCATTTTGGGGTTTTCGCCCTGAACAGAAGGGTTTT TATTCCTCCTTGCAACGCTGCGTTTCATTAAAGACAGGAAAACCCCAAGTTGCCCTTTAAAAGTTTAGCCTAATGTCTAA ATATGGGGGCATTTTGGGGTTTTCGCACCTGAACATTAGGGTTTTTCTCCCTCTTTCTTCCTCGCGCCGCTATTGCGTCG TTTCAGACGCTATTCTGGCCGCGATCGCGGCCGCTACAGCGGCCACGCGAGTTCCGCTCTGCTACAGCCTCCAGCGTCGC GGCCAACCACCGCTCCGCCACGGTGCGCCGCTATTGTGCCGCGATCGCGCGCTATTGACAACACTGGTATTAACTAGAAG TTATGTCATTTTGCAGGTACGGGAAGCTCAATTAGCGCAGTACAACTACATCTTGGTTGTTGGAGAGGAGGAAGCTAATA CAGGACAGGTTCTTTCTATTCTCACTTTCTGATAGATATATTGATTGTTCAATTCAATTTTACTTCTAATCGGTAGTAAT GTTCCGAAACCCCCCTTCCTACAAAATATATGTCTCTGCCCTTTTCTTGCTATGACATGCCATTATATACATTTCATTTG TGTTTTAGCTAGGTTGTAAATGAACTTTTTAAACCTGGCTCATTTTGTTGGAATTCATTCGAAGTGTATAAAAGATCAAG CTTGCTTGCTTATATGA
CDS sequence (LotjaGi2g1v0318100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTATGCTCTCTAATCCGTTTGCGCCGTTACGCCGCTGCTTCACCCTCTCTTCTCCTCCACCACAACCACCACAATAA CCGCTTCTACTCCTCTCCTCCTCCTCCTCCTCCCTCCGCCATGGTTGCTCACGCGAAAGACGATGCCTACCTCACCGCCG CAATCCCAAAGCGCATCAGCATGTTCGAGGCGATTCAGGCTGAACAGCGCACACTCCGGTTAACCCTATCGCCGGATCCT ATCAAGGTCACCCTCCCCGACGGCAGCGTTAGGGATGCTAAGAAATGGCAGACCACTCCCCTCGACGTTGCTCGCGACAT CTCCAAGAATTTGGCTGCTAACGCTCTCATCGCTAAGGTCAATGGCGTTCTCTGGGACATGGCTCGTCCTCTCGAGGAGG ATTGCGAGCTCCAGATCTTCAAGTTCAATGATGATGAAGGAAGAGACACTTTCTGGCATTCCAGCGCTCACATTCTAGGC CAGTCTCTTGAGACTGAGTATGGATGCAAGCTTTGCATTGGGCCTTGTACTACAAGAGGAGAGGGATTCTATTACGATGC GTTTTACGGCGACCTGGGTCTGAATGATGATCATTTCAAGCAAATTGAGGCTGGGGCATTGAAGGCTGCTGCGGAAAAAC AACCTTTTGAGCGAATTGAAGTTACCCGTGATCAGGCTCTTGAGATGTTTTCGGAGAATAAGTTTAAGATTGAAATTATC AATGATTTGCCAGCTGACAAGACTATCACGGTATACAGATGTGGTCCCCTCGTTGATTTGTGTCGTGGACCACATATACC TAATACATCCTTTGTCAAAGCAATTGCATGTTTAAAGGCTTCATCAGCATATTGGAGGGGGGACAAAGATCGTGAAAGTT TACAAAGAGTTTATGGCATATCTTATCCTGATCAGAAGAGTTTAAAGGAATATTTGCATAGGCTGGAAGAGGCTAAAAAG TATGATCATAGGATTTTGGGTGTGAAGCAGGAGCTTATCCTTCATCATGAATGGAGCCCGGGAAGCTGGTTTTTCCTTCC ACATGGTGCTCGAATCTACAACAAACTCATGGATTTCATTCGAAATCAGTACAGAGATCGGGGCTATCAAGAGGTCATAT CCCCGAATGTATTTAACATGGAGTTGTGGGAGAAATCTGGTCATGCTGCAAACTATAGAGAGGATATGTTTGTCTTTGAG ATTGACAAACAAGACTTTGGTTTGAAACCAATGAATTGCCCAGGGCACTGCTTGATGTTTCAGCACAGGGTTAGATCATA TAGAGAACTCCCACTTCGCTTCGCTGATTTTGGGGTTTTGCATCGGAATGAGGCTAGTGGTGCCCTGAGTGGATTAACAC GTGTCAGGAGATTTCAGCAGGATGATGCACATATTTTCTGCAGGGAGTCTCAGATAAAGGAAGAAGTCAGAAAAGCCTTG AATTTCATCAATTATGTTTATGAAGTTTTTGGTTTCACATATGAGCTGAAACTTTCAACGAGGCCAGAGAAATACCTAGG AGAGTTGGCAACATGGGAGAAGGCTGAAAACGCTCTTAAAGAAGCTTTGGACGAGTTTGGCAAGCCTTGGCAGTTGAATG AAGGGGATGGTGCATTCTATGGACCTAAGATAGACATCAGCGTATCTGATGCATTGAGTCGAAAATTCCAGTGTGCAACT TTGCAGCTTGACTTCCAGCTTCCTGATCGATTTAAATTGGAATACTCAGCTGAGGATGAAGCCAAAATTGAGAGACCTGT TATGATTCACAGAGCCATTCTAGGATCTGTTGAGCGCATGTTTGCCATTCTTTTAGAGCACTACAAGGGTAAATGGCCCT TGTGGCTCAGTCCTCGTCAAGCAATTGTATGTCCTGTGTCAGAGAAATCACAAGCTTATGCACTGCAGGTGCGAGATCAG ATCCACCAAGCAGGATATCACGTTGATGCTGATACAACTGATCGGAAGATTCAGAAGAAGGTACGGGAAGCTCAATTAGC GCAGTACAACTACATCTTGGTTGTTGGAGAGGAGGAAGCTAATACAGGACAGCTAGGTTGTAAATGA
Protein sequence (LotjaGi2g1v0318100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLCSLIRLRRYAAASPSLLLHHNHHNNRFYSSPPPPPPSAMVAHAKDDAYLTAAIPKRISMFEAIQAEQRTLRLTLSPDP IKVTLPDGSVRDAKKWQTTPLDVARDISKNLAANALIAKVNGVLWDMARPLEEDCELQIFKFNDDEGRDTFWHSSAHILG QSLETEYGCKLCIGPCTTRGEGFYYDAFYGDLGLNDDHFKQIEAGALKAAAEKQPFERIEVTRDQALEMFSENKFKIEII NDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKAIACLKASSAYWRGDKDRESLQRVYGISYPDQKSLKEYLHRLEEAKK YDHRILGVKQELILHHEWSPGSWFFLPHGARIYNKLMDFIRNQYRDRGYQEVISPNVFNMELWEKSGHAANYREDMFVFE IDKQDFGLKPMNCPGHCLMFQHRVRSYRELPLRFADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRESQIKEEVRKAL NFINYVYEVFGFTYELKLSTRPEKYLGELATWEKAENALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCAT LQLDFQLPDRFKLEYSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPLWLSPRQAIVCPVSEKSQAYALQVRDQ IHQAGYHVDADTTDRKIQKKVREAQLAQYNYILVVGEEEANTGQLGCK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
SignalP_GRAM_POSITIVE | 1 | 12 | 12 | - | – | |
PANTHER | 50 | 685 | 636 | 0.0 | ||
PANTHER | 50 | 685 | 636 | 0.0 | – | |
Gene3D | 79 | 140 | 62 | 5.3E-29 | ||
ProSiteProfiles | 79 | 141 | 63 | 22.453 | – | |
CDD | 81 | 146 | 66 | 3.6956E-28 | – | |
SUPERFAMILY | 81 | 141 | 61 | 1.46E-15 | ||
Pfam | 81 | 141 | 61 | 3.8E-17 | ||
SUPERFAMILY | 143 | 320 | 178 | 2.62E-51 | ||
Gene3D | 144 | 301 | 158 | 2.7E-52 | – | |
Hamap | 146 | 688 | 543 | 27.506 | ||
TIGRFAM | 152 | 687 | 536 | 8.5E-194 | ||
SMART | 249 | 298 | 50 | 1.6E-19 | ||
Pfam | 249 | 298 | 50 | 2.3E-12 | ||
Gene3D | 302 | 610 | 309 | 3.0E-143 | – | |
SUPERFAMILY | 322 | 605 | 284 | 2.99E-89 | – | |
CDD | 322 | 618 | 297 | 0.0 | ||
ProSiteProfiles | 347 | 613 | 267 | 25.379 | ||
Pfam | 399 | 608 | 210 | 4.1E-39 | ||
PRINTS | 408 | 436 | 29 | 8.1E-55 | ||
PRINTS | 441 | 464 | 24 | 8.1E-55 | ||
PRINTS | 542 | 570 | 29 | 8.1E-55 | ||
PRINTS | 586 | 599 | 14 | 8.1E-55 | ||
SUPERFAMILY | 606 | 685 | 80 | 7.4E-22 | – | |
Gene3D | 611 | 688 | 78 | 2.3E-28 | ||
PRINTS | 613 | 625 | 13 | 8.1E-55 | ||
CDD | 618 | 685 | 68 | 5.50452E-25 | – | |
Pfam | 620 | 685 | 66 | 8.5E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
Molecular function | Aminoacyl-tRNA ligase activity | Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP. | ||
Molecular function | Threonine-tRNA ligase activity | Catalysis of the reaction: ATP + L-threonine + tRNA(Thr) = AMP + diphosphate + L-threonyl-tRNA(Thr). | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
Biological process | TRNA aminoacylation for protein translation | The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, to be used in ribosome-mediated polypeptide synthesis. | ||
Biological process | Threonyl-tRNA aminoacylation | The process of coupling threonine to threonyl-tRNA, catalyzed by threonyl-tRNA synthetase. The threonyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of a threonine-accetping tRNA. | ||
Biological process | TRNA aminoacylation | The chemical reactions and pathways by which the various amino acids become bonded to their corresponding tRNAs. The most common route for synthesis of aminoacyl tRNA is by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules. |
Expression pattern of LotjaGi2g1v0318100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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