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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001611
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We have found 861 results. Now displaying 9 of 18 with 50 rows per page. This search has taken 5.345s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj6g3v1690560.1
n.a. PREDICTED: tubulin-specific chaperone E-like [Cicer arietinum] gi|502122376|ref|XP_004497715.1| chr6 18734389 18741067 +
2 domain predictions
1 GO term
Lj6g3v1690560.2
n.a. PREDICTED: tubulin-specific chaperone E-like [Cicer arietinum] gi|502122376|ref|XP_004497715.1| chr6 18734546 18742092 +
2 domain predictions
1 GO term
Lj6g3v1812070.1
n.a. PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8-like [Glycine max] gi|356555690|ref|XP_003546163.1| chr6 20206237 20227175 -
3 domain predictions
1 GO term
Lj6g3v1900330.1
n.a. PREDICTED: F-box/LRR-repeat protein 4-like [Cicer arietinum] gi|502078921|ref|XP_004486096.1| chr6 21253297 21259303 +
2 domain predictions
1 GO term
Lj6g3v1946350.1
n.a. PREDICTED: piriformospora indica-insensitive protein 2-like [Glycine max] gi|356557805|ref|XP_003547201.1| chr6 22183118 22184632 -
3 domain predictions
1 GO term
Lj6g3v1946500.1
n.a. PREDICTED: F-box protein SKIP19-like [Glycine max] gi|356546510|ref|XP_003541669.1| chr6 22279363 22282049 -
2 domain predictions
1 GO term
Lj6g3v1984440.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Glycine max] gi|356546564|ref|XP_003541695.1| chr6 22975320 22977137 +
3 domain predictions
1 GO term
Lj6g3v1984480.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Cicer arietinum] gi|502078346|ref|XP_004485915.1| chr6 22994480 23002442 +
3 domain predictions
1 GO term
Lj6g3v1984480.2
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Cicer arietinum] gi|502078346|ref|XP_004485915.1| chr6 22994917 23002442 +
2 domain predictions
1 GO term
Lj6g3v1984520.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45780-like [Glycine max] gi|356549178|ref|XP_003542974.1| chr6 23007668 23012479 -
2 domain predictions
1 GO term
Lj6g3v1984580.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230-like [Glycine max] gi|356555431|ref|XP_003546035.1| chr6 23039100 23042537 -
4 domain predictions
1 GO term
Lj6g3v2006310.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770-like [Cicer arietinum] gi|502078144|ref|XP_004485853.1| chr6 23460643 23466993 -
2 domain predictions
1 GO term
Lj6g3v2006600.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like isoform X1 [Cicer arietinum] gi|502078099|ref|XP_004485839.1| chr6 23569077 23573317 -
3 domain predictions
1 GO term
Lj6g3v2007180.1
n.a. PREDICTED: receptor-like protein kinase At3g21340-like [Cicer arietinum] gi|502078008|ref|XP_004485811.1| chr6 23704976 23711048 -
2 domain predictions
1 GO term
Lj6g3v2081360.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Cicer arietinum] gi|502078346|ref|XP_004485915.1| chr6 24530054 24536087 +
4 domain predictions
1 GO term
Lj6g3v2116820.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Glycine max] gi|356517903|ref|XP_003527625.1| chr6 24659392 24661776 -
3 domain predictions
1 GO term
Lj6g3v2218100.1
n.a. PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera] gi|359488027|ref|XP_002269288.2| chr6 25644030 25652240 -
2 domain predictions
1 GO term
Lj6g3v2218110.1
n.a. PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera] gi|359488027|ref|XP_002269288.2| chr6 25647077 25651094 -
2 domain predictions
1 GO term
Lj6g3v2218770.1
n.a. PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform 1 [Glycine max] gi|356558614|ref|XP_003547599.1| chr6 25872841 25876354 -
3 domain predictions
1 GO term
Lj6g3v2275150.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357445293|ref|XP_003592924.1| chr6 26743478 26748785 -
4 domain predictions
1 GO term
LotjaGi1g1v0013500.1
n.a. Receptor protein kinase-like protein; TAIR: AT5G56040.2 Leucine-rich receptor-like protein kinase family protein; Swiss-Prot: sp|C0LGR3|Y4265_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g26540; TrEMBL-Plants: tr|V4UNP7|V4UNP7_9ROSI Uncharacterized protein; Found in the gene: LotjaGi1g1v0013500 LjG1.1_chr1 1758440 1762785 -
2 domain predictions
1 GO term
LotjaGi1g1v0023100.1
n.a. Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT1G45616.1 receptor like protein 6; Swiss-Prot: sp|Q9C9H7|RLP12_ARATH Receptor-like protein 12; TrEMBL-Plants: tr|A0A0R0FYQ0|A0A0R0FYQ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0023100 LjG1.1_chr1 2798242 2804818 -
3 domain predictions
1 GO term
LotjaGi1g1v0031900_LC.1
n.a. Leucine-rich repeat (LRR) family protein; TAIR: AT4G35470.1 plant intracellular ras group-related LRR 4; Swiss-Prot: sp|Q8S7M7|PIRL5_ORYSJ Plant intracellular Ras-group-related LRR protein 5; TrEMBL-Plants: tr|I1MVE1|I1MVE1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0031900_LC LjG1.1_chr1 4084436 4085378 +
4 domain predictions
1 GO term
LotjaGi1g1v0036000.1
n.a. Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT1G45616.1 receptor like protein 6; Swiss-Prot: sp|Q9C9H7|RLP12_ARATH Receptor-like protein 12; TrEMBL-Plants: tr|G7KHF1|G7KHF1_MEDTR Receptor-like protein; Found in the gene: LotjaGi1g1v0036000 LjG1.1_chr1 5037982 5041321 +
3 domain predictions
1 GO term
LotjaGi1g1v0038000.1
n.a. Receptor-like protein kinase; TAIR: AT1G07650.1 Leucine-rich repeat transmembrane protein kinase; Swiss-Prot: sp|C0LGE0|Y1765_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g07650; TrEMBL-Plants: tr|A0A0S3RJK6|A0A0S3RJK6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0038000 LjG1.1_chr1 5289345 5300525 +
2 domain predictions
1 GO term
LotjaGi1g1v0047900_LC.1
n.a. Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT5G25910.1 receptor like protein 52; Swiss-Prot: sp|Q9C9H7|RLP12_ARATH Receptor-like protein 12; TrEMBL-Plants: tr|G7KCP3|G7KCP3_MEDTR Receptor-like protein; Found in the gene: LotjaGi1g1v0047900_LC LjG1.1_chr1 6545416 6546941 -
2 domain predictions
1 GO term
LotjaGi1g1v0048000.1
n.a. Non-specific serine/threonine protein kinase; TAIR: AT4G20270.1 Leucine-rich receptor-like protein kinase family protein; Swiss-Prot: sp|O65440|BAME3_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3; TrEMBL-Plants: tr|I1M732|I1M732_SOYBN Non-specific serine/threonine protein kinase; Found in the gene: LotjaGi1g1v0048000 LjG1.1_chr1 6576928 6583141 +
4 domain predictions
1 GO term
LotjaGi1g1v0054800.1
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0054800 LjG1.1_chr1 7750757 7771823 -
2 domain predictions
1 GO term
LotjaGi1g1v0054800.2
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0054800 LjG1.1_chr1 7751014 7771720 -
2 domain predictions
1 GO term
LotjaGi1g1v0054800.3
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0054800 LjG1.1_chr1 7764588 7771823 -
2 domain predictions
1 GO term
LotjaGi1g1v0054800.4
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0054800 LjG1.1_chr1 7765058 7769898 -
2 domain predictions
1 GO term
LotjaGi1g1v0056100.1
n.a. Leucine-rich repeat receptor-like protein kinase family; TAIR: AT3G43740.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|B8BB68|BAK1_ORYSI LRR receptor kinase BAK1; TrEMBL-Plants: tr|I3STZ2|I3STZ2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0056100 LjG1.1_chr1 7881627 7885030 +
2 domain predictions
1 GO term
LotjaGi1g1v0056600.1
n.a. Receptor protein kinase, putative; TAIR: AT2G27060.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q0WR59|Y5020_ARATH Probable inactive receptor kinase At5g10020; TrEMBL-Plants: tr|A0A0B2S194|A0A0B2S194_GLYSO Putative inactive receptor kinase; Found in the gene: LotjaGi1g1v0056600 LjG1.1_chr1 7921733 7927535 +
2 domain predictions
1 GO term
LotjaGi1g1v0056600.2
n.a. Receptor protein kinase, putative; TAIR: AT2G27060.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q0WR59|Y5020_ARATH Probable inactive receptor kinase At5g10020; TrEMBL-Plants: tr|A0A0B2S194|A0A0B2S194_GLYSO Putative inactive receptor kinase; Found in the gene: LotjaGi1g1v0056600 LjG1.1_chr1 7921749 7927584 +
2 domain predictions
1 GO term
LotjaGi1g1v0056600.3
n.a. Receptor protein kinase, putative; TAIR: AT2G27060.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q0WR59|Y5020_ARATH Probable inactive receptor kinase At5g10020; TrEMBL-Plants: tr|A0A0B2S194|A0A0B2S194_GLYSO Putative inactive receptor kinase; Found in the gene: LotjaGi1g1v0056600 LjG1.1_chr1 7922166 7927475 +
2 domain predictions
1 GO term
LotjaGi1g1v0056600.4
n.a. Receptor protein kinase, putative; TAIR: AT2G27060.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q0WR59|Y5020_ARATH Probable inactive receptor kinase At5g10020; TrEMBL-Plants: tr|A0A0B2S194|A0A0B2S194_GLYSO Putative inactive receptor kinase; Found in the gene: LotjaGi1g1v0056600 LjG1.1_chr1 7922948 7927381 +
2 domain predictions
1 GO term
LotjaGi1g1v0060300.5
n.a. NBS-LRR type disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0060300 LjG1.1_chr1 8406087 8412403 +
2 domain predictions
1 GO term
LotjaGi1g1v0060300.6
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0060300 LjG1.1_chr1 8406092 8412345 +
2 domain predictions
1 GO term
LotjaGi1g1v0062100_LC.1
n.a. Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT3G56100.1 meristematic receptor-like kinase; Swiss-Prot: sp|C0LGP9|IMK3_ARATH Probable leucine-rich repeat receptor-like protein kinase IMK3; TrEMBL-Plants: tr|B0BLA5|B0BLA5_LOTJA CM0545.410.nc protein; Found in the gene: LotjaGi1g1v0062100_LC LjG1.1_chr1 8663784 8664116 -
4 domain predictions
1 GO term
LotjaGi1g1v0063200.1
n.a. Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT2G34930.1 disease resistance family protein / LRR family protein; Swiss-Prot: sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1; TrEMBL-Plants: tr|A0A072UGF0|A0A072UGF0_MEDTR Leucine-rich receptor-like kinase family protein; Found in the gene: LotjaGi1g1v0063200 LjG1.1_chr1 8775403 8779917 -
4 domain predictions
1 GO term
LotjaGi1g1v0066100.1
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0066100 LjG1.1_chr1 9110106 9116462 -
2 domain predictions
1 GO term
LotjaGi1g1v0066100.2
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0066100 LjG1.1_chr1 9110111 9116477 -
2 domain predictions
1 GO term
LotjaGi1g1v0066100.3
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0066100 LjG1.1_chr1 9110111 9116477 -
2 domain predictions
1 GO term
LotjaGi1g1v0066100.4
n.a. Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0066100 LjG1.1_chr1 9110392 9116462 -
2 domain predictions
1 GO term
LotjaGi1g1v0066400.1
n.a. Receptor protein kinase-like protein; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|G7K7I9|G7K7I9_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi1g1v0066400 LjG1.1_chr1 9162776 9166796 -
2 domain predictions
1 GO term
LotjaGi1g1v0073400.1
n.a. Receptor-like kinase; TAIR: AT3G56100.1 meristematic receptor-like kinase; Swiss-Prot: sp|C0LGP9|IMK3_ARATH Probable leucine-rich repeat receptor-like protein kinase IMK3; TrEMBL-Plants: tr|A0A0R0G9R2|A0A0R0G9R2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0073400 LjG1.1_chr1 10260029 10268994 +
2 domain predictions
1 GO term
LotjaGi1g1v0073400.2
n.a. Receptor-like kinase; TAIR: AT3G56100.1 meristematic receptor-like kinase; Swiss-Prot: sp|C0LGP9|IMK3_ARATH Probable leucine-rich repeat receptor-like protein kinase IMK3; TrEMBL-Plants: tr|A0A072UGN2|A0A072UGN2_MEDTR LRR receptor-like kinase; Found in the gene: LotjaGi1g1v0073400 LjG1.1_chr1 10261040 10263806 +
2 domain predictions
1 GO term
LotjaGi1g1v0073400.3
n.a. Receptor-like kinase; TAIR: AT3G56100.1 meristematic receptor-like kinase; Swiss-Prot: sp|C0LGP9|IMK3_ARATH Probable leucine-rich repeat receptor-like protein kinase IMK3; TrEMBL-Plants: tr|A0A0R0G9R2|A0A0R0G9R2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0073400 LjG1.1_chr1 10261159 10263806 +
2 domain predictions
1 GO term
LotjaGi1g1v0097100.1
n.a. Receptor protein kinase, putative; TAIR: AT1G66150.1 transmembrane kinase 1; Swiss-Prot: sp|P43298|TMK1_ARATH Receptor protein kinase TMK1; TrEMBL-Plants: tr|A0A1J7HRR5|A0A1J7HRR5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0097100 LjG1.1_chr1 14717096 14721753 -
2 domain predictions
1 GO term
LotjaGi1g1v0104900.1
n.a. Receptor-like kinase; TAIR: AT5G58300.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9LVM0|Y5830_ARATH Probable inactive receptor kinase At5g58300; TrEMBL-Plants: tr|I1JHM8|I1JHM8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0104900 LjG1.1_chr1 16203436 16207721 +
3 domain predictions
1 GO term