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The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 320 results. Now displaying 5 of 7 with 50 rows per page. This search has taken 5.837s to perform.
Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
---|---|---|---|---|---|---|---|---|
n.a. | Ubiquitin; TAIR: AT2G47110.1 ubiquitin 6; Swiss-Prot: sp|P47905|RS27A_LUPAL Ubiquitin-40S ribosomal protein S27a; TrEMBL-Plants: tr|A0A059AWX7|A0A059AWX7_EUCGR Uncharacterized protein; Found in the gene: LotjaGi3g1v0154500_LC | LjG1.1_chr3 | 20977856 | 20978344 | + | – | ||
n.a. | Ubiquitin; TAIR: AT2G47110.1 ubiquitin 6; Swiss-Prot: sp|P47905|RS27A_LUPAL Ubiquitin-40S ribosomal protein S27a; TrEMBL-Plants: tr|A0A059AWX7|A0A059AWX7_EUCGR Uncharacterized protein; Found in the gene: LotjaGi3g1v0154500_LC | LjG1.1_chr3 | 20977880 | 20978344 | + | – | ||
n.a. | Ubiquitin; TAIR: AT2G47110.1 ubiquitin 6; Swiss-Prot: sp|P47905|RS27A_LUPAL Ubiquitin-40S ribosomal protein S27a; TrEMBL-Plants: tr|A0A059AWX7|A0A059AWX7_EUCGR Uncharacterized protein; Found in the gene: LotjaGi3g1v0154500_LC | LjG1.1_chr3 | 20977880 | 20978361 | + | – | ||
n.a. | Autophagy-related protein; TAIR: AT2G05630.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|A2YS06|ATG8C_ORYSI Autophagy-related protein 8C; TrEMBL-Plants: tr|B7FH53|B7FH53_MEDTR Autophagy-related protein; Found in the gene: LotjaGi3g1v0188200 | LjG1.1_chr3 | 26840638 | 26843099 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT2G32350.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|P0CG70|UBI4P_NEUCR Polyubiquitin; TrEMBL-Plants: tr|I1M427|I1M427_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0191000 | LjG1.1_chr3 | 27651132 | 27653001 | - | – | ||
n.a. | BAG family molecular chaperone regulator; TAIR: AT3G51780.1 BCL-2-associated athanogene 4; Swiss-Prot: sp|Q8RX71|BAG4_ARATH BAG family molecular chaperone regulator 4; TrEMBL-Plants: tr|A0A0L9VSI6|A0A0L9VSI6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0196400 | LjG1.1_chr3 | 28594463 | 28602893 | + | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|A0A072UMK2|A0A072UMK2_MEDTR Polyubiquitin 3; Found in the gene: LotjaGi3g1v0249200 | LjG1.1_chr3 | 41395092 | 41398152 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi3g1v0249200 | LjG1.1_chr3 | 41395940 | 41397840 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|A0A0P0X005|A0A0P0X005_ORYSJ protein; Found in the gene: LotjaGi3g1v0249200 | LjG1.1_chr3 | 41395092 | 41398152 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi3g1v0249200 | LjG1.1_chr3 | 41395527 | 41397995 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi3g1v0249200 | LjG1.1_chr3 | 41395892 | 41397541 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi3g1v0249200 | LjG1.1_chr3 | 41395933 | 41397553 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G02890.3 Ubiquitin family protein; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|A0A194YL57|A0A194YL57_SORBI Uncharacterized protein; Found in the gene: LotjaGi3g1v0249200 | LjG1.1_chr3 | 41395933 | 41397839 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|A0A068UJB0|A0A068UJB0_COFCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0249200 | LjG1.1_chr3 | 41395940 | 41397085 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi3g1v0249200 | LjG1.1_chr3 | 41395940 | 41397593 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi3g1v0249200 | LjG1.1_chr3 | 41395940 | 41397839 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G02890.3 Ubiquitin family protein; Swiss-Prot: sp|P0CG84|UBI4P_NICSY Polyubiquitin; TrEMBL-Plants: tr|P93501|P93501_PHAVU Ubiquitin-like protein; Found in the gene: LotjaGi3g1v0340100 | LjG1.1_chr3 | 71484823 | 71487277 | + | – | ||
n.a. | Polyubiquitin; TAIR: AT4G02890.3 Ubiquitin family protein; Swiss-Prot: sp|P0CG84|UBI4P_NICSY Polyubiquitin; TrEMBL-Plants: tr|P93501|P93501_PHAVU Ubiquitin-like protein; Found in the gene: LotjaGi3g1v0340100 | LjG1.1_chr3 | 71485240 | 71486456 | + | – | ||
n.a. | Polyubiquitin; TAIR: AT4G02890.3 Ubiquitin family protein; Swiss-Prot: sp|P0CG84|UBI4P_NICSY Polyubiquitin; TrEMBL-Plants: tr|P93501|P93501_PHAVU Ubiquitin-like protein; Found in the gene: LotjaGi3g1v0340100 | LjG1.1_chr3 | 71485241 | 71486496 | + | – | ||
n.a. | Polyubiquitin; TAIR: AT4G02890.3 Ubiquitin family protein; Swiss-Prot: sp|P0CG84|UBI4P_NICSY Polyubiquitin; TrEMBL-Plants: tr|P93501|P93501_PHAVU Ubiquitin-like protein; Found in the gene: LotjaGi3g1v0340100 | LjG1.1_chr3 | 71485530 | 71486456 | + | – | ||
n.a. | Polyubiquitin; TAIR: AT4G02890.3 Ubiquitin family protein; Swiss-Prot: sp|P0CG84|UBI4P_NICSY Polyubiquitin; TrEMBL-Plants: tr|P93501|P93501_PHAVU Ubiquitin-like protein; Found in the gene: LotjaGi3g1v0340100 | LjG1.1_chr3 | 71485539 | 71486496 | + | – | ||
n.a. | UBX domain-containing protein 2; TAIR: AT4G00752.1 UBX domain-containing protein; Swiss-Prot: sp|Q4V3D3|PUX9_ARATH Plant UBX domain-containing protein 9; TrEMBL-Plants: tr|A0A072TZJ6|A0A072TZJ6_MEDTR Ara4-interacting protein; Found in the gene: LotjaGi3g1v0376600 | LjG1.1_chr3 | 76910606 | 76924675 | - | – | ||
n.a. | FAS-associated factor 2-B; TAIR: AT4G11740.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|F4JPR7|PUX8_ARATH Plant UBX domain-containing protein 8; TrEMBL-Plants: tr|A0A1J7HI96|A0A1J7HI96_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0376600 | LjG1.1_chr3 | 76910606 | 76924765 | - | – | ||
n.a. | Phosphatidylinositol 4-kinase gamma 4; TAIR: AT2G46500.1 phosphoinositide 4-kinase gamma 4; Swiss-Prot: sp|Q9ZPY9|P4KG4_ARATH Phosphatidylinositol 4-kinase gamma 4; TrEMBL-Plants: tr|I1MKI4|I1MKI4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0396100 | LjG1.1_chr3 | 79640408 | 79644101 | + | – | ||
n.a. | Phosphatidylinositol 4-kinase gamma 4; TAIR: AT2G46500.1 phosphoinositide 4-kinase gamma 4; Swiss-Prot: sp|Q9ZPY9|P4KG4_ARATH Phosphatidylinositol 4-kinase gamma 4; TrEMBL-Plants: tr|I1MKI4|I1MKI4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0396100 | LjG1.1_chr3 | 79641127 | 79642771 | + | – | ||
n.a. | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; TAIR: AT1G14650.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; Swiss-Prot: sp|Q8RXF1|SF3A1_ARATH Probable splicing factor 3A subunit 1; TrEMBL-Plants: tr|A0A0S3SM17|A0A0S3SM17_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0421600 | LjG1.1_chr3 | 82994282 | 82998684 | - | – | ||
n.a. | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; TAIR: AT1G14650.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; Swiss-Prot: sp|Q8RXF1|SF3A1_ARATH Probable splicing factor 3A subunit 1; TrEMBL-Plants: tr|A0A0S3SM17|A0A0S3SM17_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0421600 | LjG1.1_chr3 | 82994713 | 82998646 | - | – | ||
n.a. | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; TAIR: AT1G14650.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; Swiss-Prot: sp|Q8RXF1|SF3A1_ARATH Probable splicing factor 3A subunit 1; TrEMBL-Plants: tr|A0A0S3SM17|A0A0S3SM17_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0421600 | LjG1.1_chr3 | 82995790 | 82998345 | - | – | ||
n.a. | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; TAIR: AT1G14650.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; Swiss-Prot: sp|Q8RXF1|SF3A1_ARATH Probable splicing factor 3A subunit 1; TrEMBL-Plants: tr|A0A0S3SM17|A0A0S3SM17_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0421600 | LjG1.1_chr3 | 82995790 | 82998556 | - | – | ||
n.a. | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT3G21280.1 ubiquitin carboxyl-terminal hydrolase; Swiss-Prot: sp|Q84WC6|UBP7_ARATH Ubiquitin carboxyl-terminal hydrolase 7; TrEMBL-Plants: tr|A0A0L9TA17|A0A0L9TA17_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0427700 | LjG1.1_chr3 | 83880881 | 83891390 | - | – | ||
n.a. | Pre-mRNA splicing factor-like protein; TAIR: AT4G03430.1 pre-mRNA splicing factor-like protein; Swiss-Prot: sp|Q9ZT71|STA1_ARATH Protein STABILIZED1; TrEMBL-Plants: tr|V7BV27|V7BV27_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0443200 | LjG1.1_chr3 | 85656100 | 85659985 | - | – | ||
n.a. | Autophagy-related protein; TAIR: AT2G05630.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|A2YS06|ATG8C_ORYSI Autophagy-related protein 8C; TrEMBL-Plants: tr|I3ST09|I3ST09_LOTJA Autophagy-related protein; Found in the gene: LotjaGi3g1v0466800 | LjG1.1_chr3 | 88228491 | 88237210 | + | – | ||
n.a. | Autophagy-related protein; TAIR: AT2G05630.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q9SL04|ATG8D_ARATH Autophagy-related protein 8d; TrEMBL-Plants: tr|I3SA41|I3SA41_MEDTR Autophagy-related protein; Found in the gene: LotjaGi3g1v0466800 | LjG1.1_chr3 | 88234902 | 88236449 | + | – | ||
n.a. | U11/U12 small nuclear ribonucleoprotein 25 kDa-like protein; TAIR: AT3G07860.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q84WS8|U1125_ARATH U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TrEMBL-Plants: tr|I3SEG9|I3SEG9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0526300 | LjG1.1_chr3 | 94275667 | 94294472 | - | – | ||
n.a. | E3 ubiquitin-protein ligase-like protein; TAIR: AT4G12570.1 ubiquitin protein ligase 5; Swiss-Prot: sp|Q9SU29|UPL5_ARATH E3 ubiquitin-protein ligase UPL5; TrEMBL-Plants: tr|K7MJB8|K7MJB8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0008500 | LjG1.1_chr4 | 1164205 | 1170921 | + | – | ||
n.a. | UBX domain-containing protein, putative; TAIR: AT4G04210.1 plant UBX domain containing protein 4; Swiss-Prot: sp|Q8RWU7|PUX4_ARATH Plant UBX domain-containing protein 4; TrEMBL-Plants: tr|I3SVF6|I3SVF6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0010800 | LjG1.1_chr4 | 1363856 | 1367179 | + | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi4g1v0059800 | LjG1.1_chr4 | 7171744 | 7185410 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi4g1v0059800 | LjG1.1_chr4 | 7178326 | 7184457 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G02890.1 Ubiquitin family protein; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|Q41754|Q41754_MAIZE Polyubiquitin containing 7 ubiquitin monomers; Found in the gene: LotjaGi4g1v0059800 | LjG1.1_chr4 | 7182598 | 7185410 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.1 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|K3YR52|K3YR52_SETIT Uncharacterized protein; Found in the gene: LotjaGi4g1v0059800 | LjG1.1_chr4 | 7183064 | 7184220 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G02890.1 Ubiquitin family protein; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|D7M3C0|D7M3C0_ARALL Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0059800 | LjG1.1_chr4 | 7183075 | 7184291 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|K7UBK6|K7UBK6_MAIZE Ubiquitin2; Found in the gene: LotjaGi4g1v0059800 | LjG1.1_chr4 | 7183075 | 7184473 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi4g1v0059800 | LjG1.1_chr4 | 7183075 | 7184635 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi4g1v0059800 | LjG1.1_chr4 | 7183075 | 7184659 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi4g1v0059800 | LjG1.1_chr4 | 7183075 | 7184747 | - | – | ||
n.a. | Polyubiquitin protein; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi4g1v0059800 | LjG1.1_chr4 | 7171835 | 7185278 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi4g1v0059800 | LjG1.1_chr4 | 7171836 | 7184747 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G02890.1 Ubiquitin family protein; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|A0A0V0HI41|A0A0V0HI41_SOLCH Putative ovule protein; Found in the gene: LotjaGi4g1v0059800 | LjG1.1_chr4 | 7171881 | 7172946 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G02890.1 Ubiquitin family protein; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|A0A0V0HI41|A0A0V0HI41_SOLCH Putative ovule protein; Found in the gene: LotjaGi4g1v0059800 | LjG1.1_chr4 | 7171881 | 7173095 | - | – | ||
n.a. | Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|A0A072UMK2|A0A072UMK2_MEDTR Polyubiquitin 3; Found in the gene: LotjaGi4g1v0059800 | LjG1.1_chr4 | 7171881 | 7184448 | - | – |