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IPR033720 is a Elongation factor Tu, domain 2.
<p>Elongation factors Tu (EF-Tu) are three-domain GTPases with an essential function in the elongation phase of mRNA translation. The GTPase centre of EF-Tu is in the N-terminal domain (domain I), also known as the catalytic or G-domain. The G-domain is composed of about 200 amino acid residues, arranged into a predominantly parallel six-stranded β-sheet core surrounded by seven a-helices. Non-catalytic domains II and III are β-barrels of seven and six, respectively, antiparallel β-strands that share an extended interface. Either non-catalytic domain is composed of about 100 amino acid residues. EF-Tu proteins exist in two principal conformations: in a compact one, EF-Tu*GTP, with tight interfaces between all three domains and a high affinity for aminoacyl-tRNA, and in an open one, EF-Tu*GDP, with essentially no G-domain-domain II interactions and a low affinity for aminoacyl-tRNA. EF-Tu has approximately a 100-fold higher affinity for GDP than for GTP [[cite:PUB00033952], [cite:PUB00027704], [cite:PUB00033961], [cite:PUB00079814]].</p> <p>This entry represents domain II.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max] gi|356513781|ref|XP_003525588.1| | 30 | ||
| – | PREDICTED: elongation factor Tu, chloroplastic-like isoform 1 [Vitis vinifera] gi|225452282|ref|XP_002271032.1| | 14 | ||
| – | PREDICTED: elongation factor Tu, mitochondrial-like [Glycine max] gi|356572160|ref|XP_003554238.1| | 29 | ||
| – | PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max] gi|356513781|ref|XP_003525588.1| | 25 | ||
| – | PREDICTED: elongation factor Tu, mitochondrial-like [Cucumis sativus] gi|449436569|ref|XP_004136065.1| | 16 | ||
| – | Elongation factor Tu; TAIR: AT4G20360.1 RAB GTPase homolog E1B; Swiss-Prot: sp|P46280|EFTU2_SOYBN Elongation factor Tu, chloroplastic; TrEMBL-Plants: tr|K7KMT9|K7KMT9_SOYBN Elongation factor Tu; Found in the gene: LotjaGi1g1v0198100 | 31 | ||
| – | Elongation factor Tu; TAIR: AT4G02930.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp|Q9ZT91|EFTM_ARATH Elongation factor Tu, mitochondrial; TrEMBL-Plants: tr|V7CYM1|V7CYM1_PHAVU Elongation factor Tu; Found in the gene: LotjaGi1g1v0730600 | 30 | ||
| – | Elongation factor Tu; TAIR: AT4G02930.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp|Q9ZT91|EFTM_ARATH Elongation factor Tu, mitochondrial; TrEMBL-Plants: tr|A0A1J7HTE2|A0A1J7HTE2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0730600 | 14 | ||
| – | Elongation factor Tu; TAIR: AT4G02930.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp|Q9ZT91|EFTM_ARATH Elongation factor Tu, mitochondrial; TrEMBL-Plants: tr|A0A1J7HTE2|A0A1J7HTE2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0730600 | 14 | ||
| – | Elongation factor Tu; TAIR: AT4G20360.1 RAB GTPase homolog E1B; Swiss-Prot: sp|P46280|EFTU2_SOYBN Elongation factor Tu, chloroplastic; TrEMBL-Plants: tr|K7KMT9|K7KMT9_SOYBN Elongation factor Tu; Found in the gene: LotjaGi4g1v0228100 | 32 | ||
| – | Elongation factor Tu; TAIR: AT4G02930.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp|Q9ZT91|EFTM_ARATH Elongation factor Tu, mitochondrial; TrEMBL-Plants: tr|A0A151U0N5|A0A151U0N5_CAJCA Elongation factor Tu; Found in the gene: LotjaGi6g1v0300500 | 30 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd03707 | CDD | 1 | 9.09 |