Domain Predictions — View

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cd03707

Source: CDD

Description

EFTU_III

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 11

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v0296910.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max] gi\|356513781\|ref\|XP_003525588.1\|	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004541 IPR005225 IPR009000 IPR009001 IPR027417 IPR031157 IPR033720 MF_00118_B PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF146 SSF50447 SSF50465 SSF52540 SignalP-TM_GRAM_POSITIVE TIGR00231 TIGR00485 cd01884 cd03697 cd03707	30
Lj1g3v0296920.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor Tu, chloroplastic-like isoform 1 [Vitis vinifera] gi\|225452282\|ref\|XP_002271032.1\|	Domains G3DSA:2.40.30.10 IPR004160 IPR004161 IPR009000 IPR009001 IPR033720 PF03143 PF03144 PTHR23115 PTHR23115:SF146 SSF50447 SSF50465 cd03697 cd03707	14
Lj1g3v4408630.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor Tu, mitochondrial-like [Glycine max] gi\|356572160\|ref\|XP_003554238.1\|	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004541 IPR005225 IPR009000 IPR009001 IPR027417 IPR031157 IPR033720 MF_00118_B PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF155 SSF50447 SSF50465 SSF52540 TIGR00231 TIGR00485 cd01884 cd03697 cd03707	29
Lj4g3v1425330.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max] gi\|356513781\|ref\|XP_003525588.1\|	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004541 IPR009000 IPR009001 IPR027417 IPR031157 IPR033720 PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF146 SSF50447 SSF50465 SSF52540 TIGR00485 cd03697 cd03707	25
Lj6g3v1887770.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor Tu, mitochondrial-like [Cucumis sativus] gi\|449436569\|ref\|XP_004136065.1\|	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR004160 IPR004161 IPR009000 IPR009001 IPR027417 IPR033720 PF03143 PF03144 PTHR23115 PTHR23115:SF181 SSF50447 SSF50465 cd03697 cd03707	16
LotjaGi1g1v0198100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor Tu; TAIR: AT4G20360.1 RAB GTPase homolog E1B; Swiss-Prot: sp\|P46280\|EFTU2_SOYBN Elongation factor Tu, chloroplastic; TrEMBL-Plants: tr\|K7KMT9\|K7KMT9_SOYBN Elongation factor Tu; Found in the gene: LotjaGi1g1v0198100	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004541 IPR005225 IPR009000 IPR009001 IPR027417 IPR031157 IPR033720 IPR041709 MF_00118_B PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR43721 PTHR43721:SF21 SSF50447 SSF50465 SSF52540 SignalP-TM TIGR00231 TIGR00485 cd01884 cd03697 cd03707	31
LotjaGi1g1v0730600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor Tu; TAIR: AT4G02930.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp\|Q9ZT91\|EFTM_ARATH Elongation factor Tu, mitochondrial; TrEMBL-Plants: tr\|V7CYM1\|V7CYM1_PHAVU Elongation factor Tu; Found in the gene: LotjaGi1g1v0730600	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004541 IPR005225 IPR009000 IPR009001 IPR027417 IPR031157 IPR033720 IPR041709 MF_00118_B PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR43721 PTHR43721:SF23 SSF50447 SSF50465 SSF52540 TIGR00231 TIGR00485 cd01884 cd03697 cd03707	30
LotjaGi1g1v0730600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor Tu; TAIR: AT4G02930.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp\|Q9ZT91\|EFTM_ARATH Elongation factor Tu, mitochondrial; TrEMBL-Plants: tr\|A0A1J7HTE2\|A0A1J7HTE2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0730600	Domains G3DSA:2.40.30.10 IPR004160 IPR004161 IPR009000 IPR009001 IPR033720 PF03143 PF03144 PTHR43721 PTHR43721:SF23 SSF50447 SSF50465 cd03697 cd03707	14
LotjaGi1g1v0730600.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor Tu; TAIR: AT4G02930.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp\|Q9ZT91\|EFTM_ARATH Elongation factor Tu, mitochondrial; TrEMBL-Plants: tr\|A0A1J7HTE2\|A0A1J7HTE2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0730600	Domains G3DSA:2.40.30.10 IPR004160 IPR004161 IPR009000 IPR009001 IPR033720 PF03143 PF03144 PTHR43721 PTHR43721:SF23 SSF50447 SSF50465 cd03697 cd03707	14
LotjaGi4g1v0228100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor Tu; TAIR: AT4G20360.1 RAB GTPase homolog E1B; Swiss-Prot: sp\|P46280\|EFTU2_SOYBN Elongation factor Tu, chloroplastic; TrEMBL-Plants: tr\|K7KMT9\|K7KMT9_SOYBN Elongation factor Tu; Found in the gene: LotjaGi4g1v0228100	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004541 IPR005225 IPR009000 IPR009001 IPR027417 IPR031157 IPR033720 IPR041709 MF_00118_B PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR43721 PTHR43721:SF21 SSF50447 SSF50465 SSF52540 SignalP-TM TIGR00231 TIGR00485 cd01884 cd03697 cd03707 mobidb-lite	32
LotjaGi6g1v0300500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor Tu; TAIR: AT4G02930.1 GTP binding Elongation factor Tu family protein; Swiss-Prot: sp\|Q9ZT91\|EFTM_ARATH Elongation factor Tu, mitochondrial; TrEMBL-Plants: tr\|A0A151U0N5\|A0A151U0N5_CAJCA Elongation factor Tu; Found in the gene: LotjaGi6g1v0300500	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR004160 IPR004161 IPR004541 IPR005225 IPR009000 IPR009001 IPR027417 IPR031157 IPR033720 IPR041709 MF_00118_B PF00009 PF03143 PF03144 PR00315 PS00301 PS51722 PTHR43721 PTHR43721:SF23 SSF50447 SSF50465 SSF52540 TIGR00231 TIGR00485 cd01884 cd03697 cd03707	30

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd03707	CDD	1	9.09