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PIRSF000412

Source: PIRSF

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004372
Molecular function Glycine hydroxymethyltransferase activity Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine.
Subterm of
GO:0019264
Biological process Glycine biosynthetic process from serine The chemical reactions and pathways resulting in the formation of glycine from other compounds, including serine.
Subterm of
GO:0030170
Molecular function Pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
Subterm of
GO:0035999
Biological process Tetrahydrofolate interconversion The chemical reactions and pathways by which one-carbon (C1) units are transferred between tetrahydrofolate molecules, to synthesise other tetrahydrofolate molecules.
Subterm of

Associated Lotus transcripts 22

Transcript Name Description Predicted domains Domain count
Lj1g3v0173680.1
– PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Glycine max] gi|356500779|ref|XP_003519208.1|
Domains
17
Lj2g3v1467880.1
– Serine hydroxymethyltransferase 5 [Glycine max] gi|351722703|ref|NP_001237509.1|
Domains
15
Lj4g3v2592460.1
– Serine hydroxymethyltransferase [Glycine max] gi|389548688|gb|AFK83582.1|
Domains
15
Lj4g3v2692470.1
– Serine hydroxymethyltransferase [Medicago truncatula] gi|357445445|ref|XP_003593000.1|
Domains
14
Lj6g3v0247670.1
– PREDICTED: serine hydroxymethyltransferase 1-like [Cicer arietinum] gi|502135169|ref|XP_004502243.1|
Domains
15
Lj6g3v1966340.1
– Serine hydroxymethyltransferase 4 [Glycine max] gi|351724373|ref|NP_001238335.1|
Domains
14
LotjaGi1g1v0134500.1
– Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|A0A0R4J2Q8|A0A0R4J2Q8_SOYBN Serine hydroxymethyltransferase; Found in the gene: LotjaGi1g1v0134500
Domains
17
LotjaGi1g1v0134500.2
– Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|A0A0R4J2Q8|A0A0R4J2Q8_SOYBN Serine hydroxymethyltransferase; Found in the gene: LotjaGi1g1v0134500
Domains
17
LotjaGi2g1v0330200.1
– Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|I3SY17|I3SY17_LOTJA Serine hydroxymethyltransferase; Found in the gene: LotjaGi2g1v0330200
Domains
16
LotjaGi2g1v0330200.2
– Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|I3SY17|I3SY17_LOTJA Serine hydroxymethyltransferase; Found in the gene: LotjaGi2g1v0330200
Domains
16
LotjaGi2g1v0330200.3
– Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|I3SY17|I3SY17_LOTJA Serine hydroxymethyltransferase; Found in the gene: LotjaGi2g1v0330200
Domains
15
LotjaGi2g1v0330200.4
– Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|I3SY17|I3SY17_LOTJA Serine hydroxymethyltransferase; Found in the gene: LotjaGi2g1v0330200
Domains
16
LotjaGi2g1v0330200.5
– Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|I3SY17|I3SY17_LOTJA Serine hydroxymethyltransferase; Found in the gene: LotjaGi2g1v0330200
Domains
15
LotjaGi2g1v0330200.6
– Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|I3SY17|I3SY17_LOTJA Serine hydroxymethyltransferase; Found in the gene: LotjaGi2g1v0330200
Domains
15
LotjaGi4g1v0371600.1
– Serine hydroxymethyltransferase; TAIR: AT4G13930.1 serine hydroxymethyltransferase 4; Swiss-Prot: sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4; TrEMBL-Plants: tr|A0A1B1RUN9|A0A1B1RUN9_GLYSO Serine hydroxymethyltransferase; Found in the gene: LotjaGi4g1v0371600
Domains
16
LotjaGi4g1v0371600.2
– Serine hydroxymethyltransferase; TAIR: AT4G13930.1 serine hydroxymethyltransferase 4; Swiss-Prot: sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4; TrEMBL-Plants: tr|A0A1B1RUN9|A0A1B1RUN9_GLYSO Serine hydroxymethyltransferase; Found in the gene: LotjaGi4g1v0371600
Domains
16
LotjaGi4g1v0371600.3
– Serine hydroxymethyltransferase; TAIR: AT4G13930.1 serine hydroxymethyltransferase 4; Swiss-Prot: sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4; TrEMBL-Plants: tr|A0A1B1RUN9|A0A1B1RUN9_GLYSO Serine hydroxymethyltransferase; Found in the gene: LotjaGi4g1v0371600
Domains
16
LotjaGi6g1v0040700.1
– Serine hydroxymethyltransferase; TAIR: AT4G13930.1 serine hydroxymethyltransferase 4; Swiss-Prot: sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4; TrEMBL-Plants: tr|G7JAR7|G7JAR7_MEDTR Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0040700
Domains
16
LotjaGi6g1v0040700.2
– Serine hydroxymethyltransferase; TAIR: AT4G13930.1 serine hydroxymethyltransferase 4; Swiss-Prot: sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4; TrEMBL-Plants: tr|G7JAR7|G7JAR7_MEDTR Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0040700
Domains
16
LotjaGi6g1v0040700.3
– Serine hydroxymethyltransferase; TAIR: AT4G13930.1 serine hydroxymethyltransferase 4; Swiss-Prot: sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4; TrEMBL-Plants: tr|I3SEQ9|I3SEQ9_MEDTR Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0040700
Domains
15
LotjaGi6g1v0314300.1
– Serine hydroxymethyltransferase; TAIR: AT4G32520.1 serine hydroxymethyltransferase 3; Swiss-Prot: sp|Q94JQ3|GLYP3_ARATH Serine hydroxymethyltransferase 3, chloroplastic; TrEMBL-Plants: tr|V7BSE7|V7BSE7_PHAVU Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0314300
Domains
16
LotjaGi6g1v0314300.2
– Serine hydroxymethyltransferase; TAIR: AT4G32520.1 serine hydroxymethyltransferase 3; Swiss-Prot: sp|Q94JQ3|GLYP3_ARATH Serine hydroxymethyltransferase 3, chloroplastic; TrEMBL-Plants: tr|A0A0R0H289|A0A0R0H289_SOYBN Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0314300
Domains
16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00378 CDD 1 4.55