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GO:0035999

Overview

Field Value
Namespace Biological process
Short description Tetrahydrofolate interconversion
Full defintion The chemical reactions and pathways by which one-carbon (C1) units are transferred between tetrahydrofolate molecules, to synthesise other tetrahydrofolate molecules.
Subterm of

Relationships

The relationship of GO:0035999 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCyaf
PMID
Rate and extent of interconversion of tetrahydrofolate cofactors to dihydrofolate after cessation of dihydrofolate reductase activity in stationary versus log phase L1210 leukemia cells.
J Biol Chem. ; 266 (9): 5445–9.PMID: 1825999

Previous studies from this laboratory established that the rapid but partial interconversion of tetrahydrofolate cofactors to dihydrofolate after exposure of L1210 leukemia cells to antifolates cannot be due to direct feedback inhibition of thymidylate synthase by dihydrofolate or any other endogenous folylpolyglutamates when dihydrofolate reductase activity is abolished by antifolates. Rather, the data suggested this preservation of tetrahydrofolate cofactor pools is likely due to a fraction of cellular folates unavailable for oxidation to dihydrofolate. This paper explores the role of cell cycle phase in L1210 leukemia cells in logarithmic versus stationary phase growth as a factor in the rate and extent of tetrahydrofolate cofactor interconversion to dihydrofolate after exposure of cells to the dihydrofolate reductase inhibitor trimetrexate. The S phase fraction was reduced by inoculating L1210 leukemia cells at high density to achieve a stationary state. Flow cytometric analysis of DNA content indicated that log phase cultures were 53.0% S phase; this decreased to 42.1% at 24 h and 24.1% at 48 h in stationary phase cultures. 5-Bromo-2'-deoxyuridine incorporation into DNA decreased 80 and 96%, while [3H]dUrd incorporation into DNA declined 70 and 95% for stationary cultures at 24 and 48 h, respectively, as compared with the log phase rates. Log phase cells interconverted 28.0% of the total pool of radiolabeled folates to dihydrofolate with a half-time of approximately 30 s. Stationary cells at 24 h interconverted 20.4% of the total folate pool with a t1/2 of approximately 3 min, and at 48 h, net interconversion to dihydrofolate decreased further to 12.1% with a t1/2 of approximately 6 min. The decrease in the extent of tetrahydrofolate cofactor interconversion to dihydrofolate in stationary phase cells was directly proportional to the decrease in the S phase fraction determined by total DNA content. This suggests that tetrahydrofolate cofactor depletion occurs only in S phase cells. The much larger drop in [3H]dUrd and 5-bromo-2'-deoxyuridine incorporation into DNA in comparison with the decline in the S phase fraction measured by DNA content along with the reduced rate of tetrahydrofolate cofactor interconversion to dihydrofolate indicates that the rate of DNA synthesis is decreased in S phase cells in stationary cultures. Network thermodynamic simulations suggest that a reduction in the number of S phase cells and their thymidylate synthase catalytic activity would account for the observed decrease in the rate and extent of interconversion of tetrahydrofolate cofactors to dihydrofolate after trimetrexate in stationary phase cultures.(ABSTRACT TRUNCATED AT 400 WORDS)

UniPathwayUPA00193

Associated Lotus transcripts 29

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Glycine max] gi|356500779|ref|XP_003519208.1| 4
Serine hydroxymethyltransferase [Medicago truncatula] gi|357490157|ref|XP_003615366.1| 4
Serine hydroxymethyltransferase [Medicago truncatula] gi|357461719|ref|XP_003601141.1| 4
Serine hydroxymethyltransferase 5 [Glycine max] gi|351722703|ref|NP_001237509.1| 4
Serine hydroxymethyltransferase [Glycine max] gi|389548688|gb|AFK83582.1| 4
Serine hydroxymethyltransferase [Medicago truncatula] gi|357445445|ref|XP_003593000.1| 4
PREDICTED: serine hydroxymethyltransferase 1-like [Cicer arietinum] gi|502135169|ref|XP_004502243.1| 4
PREDICTED: serine hydroxymethyltransferase 1-like [Cicer arietinum] gi|502135169|ref|XP_004502243.1| 4
Serine hydroxymethyltransferase 4 [Glycine max] gi|351724373|ref|NP_001238335.1| 4
Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|A0A0R4J2Q8|A0A0R4J2Q8_SOYBN Serine hydroxymethyltransferase; Found in the gene: LotjaGi1g1v0134500 4
Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|A0A0R4J2Q8|A0A0R4J2Q8_SOYBN Serine hydroxymethyltransferase; Found in the gene: LotjaGi1g1v0134500 4
Serine hydroxymethyltransferase; TAIR: AT1G36370.1 serine hydroxymethyltransferase 7; Swiss-Prot: sp|Q84WV0|GLYC7_ARATH Serine hydroxymethyltransferase 7; TrEMBL-Plants: tr|G7J467|G7J467_MEDTR Serine hydroxymethyltransferase; Found in the gene: LotjaGi1g1v0249100 4
Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|I3SY17|I3SY17_LOTJA Serine hydroxymethyltransferase; Found in the gene: LotjaGi2g1v0330200 4
Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|I3SY17|I3SY17_LOTJA Serine hydroxymethyltransferase; Found in the gene: LotjaGi2g1v0330200 4
Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|I3SY17|I3SY17_LOTJA Serine hydroxymethyltransferase; Found in the gene: LotjaGi2g1v0330200 4
Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|I3SY17|I3SY17_LOTJA Serine hydroxymethyltransferase; Found in the gene: LotjaGi2g1v0330200 4
Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|I3SY17|I3SY17_LOTJA Serine hydroxymethyltransferase; Found in the gene: LotjaGi2g1v0330200 4
Serine hydroxymethyltransferase; TAIR: AT4G37930.1 serine transhydroxymethyltransferase 1; Swiss-Prot: sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial; TrEMBL-Plants: tr|I3SY17|I3SY17_LOTJA Serine hydroxymethyltransferase; Found in the gene: LotjaGi2g1v0330200 4
Serine hydroxymethyltransferase; TAIR: AT4G13930.1 serine hydroxymethyltransferase 4; Swiss-Prot: sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4; TrEMBL-Plants: tr|A0A1B1RUN9|A0A1B1RUN9_GLYSO Serine hydroxymethyltransferase; Found in the gene: LotjaGi4g1v0371600 4
Serine hydroxymethyltransferase; TAIR: AT4G13930.1 serine hydroxymethyltransferase 4; Swiss-Prot: sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4; TrEMBL-Plants: tr|A0A1B1RUN9|A0A1B1RUN9_GLYSO Serine hydroxymethyltransferase; Found in the gene: LotjaGi4g1v0371600 4
Serine hydroxymethyltransferase; TAIR: AT4G13930.1 serine hydroxymethyltransferase 4; Swiss-Prot: sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4; TrEMBL-Plants: tr|A0A1B1RUN9|A0A1B1RUN9_GLYSO Serine hydroxymethyltransferase; Found in the gene: LotjaGi4g1v0371600 4
Serine hydroxymethyltransferase; TAIR: AT4G13930.1 serine hydroxymethyltransferase 4; Swiss-Prot: sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4; TrEMBL-Plants: tr|G7JAR7|G7JAR7_MEDTR Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0040700 4
Serine hydroxymethyltransferase; TAIR: AT4G13930.1 serine hydroxymethyltransferase 4; Swiss-Prot: sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4; TrEMBL-Plants: tr|G7JAR7|G7JAR7_MEDTR Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0040700 4
Serine hydroxymethyltransferase; TAIR: AT4G13930.1 serine hydroxymethyltransferase 4; Swiss-Prot: sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4; TrEMBL-Plants: tr|I3SEQ9|I3SEQ9_MEDTR Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0040700 4
Serine hydroxymethyltransferase; TAIR: AT4G32520.1 serine hydroxymethyltransferase 3; Swiss-Prot: sp|Q94JQ3|GLYP3_ARATH Serine hydroxymethyltransferase 3, chloroplastic; TrEMBL-Plants: tr|V7BSE7|V7BSE7_PHAVU Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0314300 4
Serine hydroxymethyltransferase; TAIR: AT4G32520.1 serine hydroxymethyltransferase 3; Swiss-Prot: sp|Q94JQ3|GLYP3_ARATH Serine hydroxymethyltransferase 3, chloroplastic; TrEMBL-Plants: tr|A0A0R0H289|A0A0R0H289_SOYBN Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0314300 4
Serine hydroxymethyltransferase; TAIR: AT1G22020.1 serine hydroxymethyltransferase 6; Swiss-Prot: sp|Q9LM59|GLYC6_ARATH Serine hydroxymethyltransferase 6; TrEMBL-Plants: tr|G7IPE1|G7IPE1_MEDTR Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0361500 4
Serine hydroxymethyltransferase; TAIR: AT1G22020.1 serine hydroxymethyltransferase 6; Swiss-Prot: sp|Q9LM59|GLYC6_ARATH Serine hydroxymethyltransferase 6; TrEMBL-Plants: tr|G7IPE1|G7IPE1_MEDTR Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0361500 4
Serine hydroxymethyltransferase; TAIR: AT1G22020.1 serine hydroxymethyltransferase 6; Swiss-Prot: sp|Q9LM59|GLYC6_ARATH Serine hydroxymethyltransferase 6; TrEMBL-Plants: tr|A0A0R0IP64|A0A0R0IP64_SOYBN Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0361500 4

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
Biological process Tetrahydrofolate interconversion 1 3.45