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PS00470

Source: ProSitePatterns

Description

Isocitrate and isopropylmalate dehydrogenases signature.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0016616
Molecular function Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
Subterm of
GO:0051287
Molecular function NAD binding Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Associated Lotus transcripts 16

Transcript Name Description Predicted domains Domain count
Lj1g3v0488980.1
– PREDICTED: isocitrate dehydrogenase [NADP] gi|502096593|ref|XP_004490788.1|
Domains
11
Lj2g3v0948370.1
– PREDICTED: isocitrate dehydrogenase [NADP] gi|356513947|ref|XP_003525669.1|
Domains
11
Lj3g3v0030650.1
– PREDICTED: 3-isopropylmalate dehydrogenase, chloroplastic-like [Cicer arietinum] gi|502080646|ref|XP_004486631.1|
Domains
13
Lj3g3v0937820.1
– NADP-dependent isocitrate dehydrogenase [Glycine max] gi|351721946|ref|NP_001236203.1|
Domains
11
Lj5g3v0659740.1
– PREDICTED: isocitrate dehydrogenase [NAD] gi|502132922|ref|XP_004501584.1|
Domains
9
Lj5g3v0659740.2
– PREDICTED: isocitrate dehydrogenase [NAD] gi|502132925|ref|XP_004501585.1|
Domains
9
LotjaGi1g1v0219400.1
– Isocitrate dehydrogenase [NADP]; TAIR: AT1G65930.1 cytosolic NADP+-dependent isocitrate dehydrogenase; Swiss-Prot: sp|Q06197|IDHC_SOYBN Isocitrate dehydrogenase [NADP]; TrEMBL-Plants: tr|A0A0R0GQK7|A0A0R0GQK7_SOYBN Isocitrate dehydrogenase [NADP]; Found in the gene: LotjaGi1g1v0219400
Domains
12
LotjaGi1g1v0219400.2
– Isocitrate dehydrogenase [NADP]; TAIR: AT1G65930.1 cytosolic NADP+-dependent isocitrate dehydrogenase; Swiss-Prot: sp|Q06197|IDHC_SOYBN Isocitrate dehydrogenase [NADP]; TrEMBL-Plants: tr|C6T857|C6T857_SOYBN Isocitrate dehydrogenase [NADP]; Found in the gene: LotjaGi1g1v0219400
Domains
12
LotjaGi1g1v0219400.3
– Isocitrate dehydrogenase [NADP]; TAIR: AT1G65930.1 cytosolic NADP+-dependent isocitrate dehydrogenase; Swiss-Prot: sp|Q06197|IDHC_SOYBN Isocitrate dehydrogenase [NADP]; TrEMBL-Plants: tr|C6T857|C6T857_SOYBN Isocitrate dehydrogenase [NADP]; Found in the gene: LotjaGi1g1v0219400
Domains
12
LotjaGi3g1v0006000.1
– 3-isopropylmalate dehydrogenase; TAIR: AT1G80560.1 isopropylmalate dehydrogenase 2; Swiss-Prot: sp|P29102|LEU3_BRANA 3-isopropylmalate dehydrogenase, chloroplastic; TrEMBL-Plants: tr|A0A151SPV9|A0A151SPV9_CAJCA 3-isopropylmalate dehydrogenase; Found in the gene: LotjaGi3g1v0006000
Domains
12
LotjaGi3g1v0130600.1
– Isocitrate dehydrogenase [NADP]; TAIR: AT1G54340.1 isocitrate dehydrogenase; Swiss-Prot: sp|P50218|IDHC_TOBAC Isocitrate dehydrogenase [NADP]; TrEMBL-Plants: tr|A0A0B2QN79|A0A0B2QN79_GLYSO Isocitrate dehydrogenase [NADP]; Found in the gene: LotjaGi3g1v0130600
Domains
12
LotjaGi3g1v0130600.2
– Isocitrate dehydrogenase [NADP]; TAIR: AT1G54340.1 isocitrate dehydrogenase; Swiss-Prot: sp|P50218|IDHC_TOBAC Isocitrate dehydrogenase [NADP]; TrEMBL-Plants: tr|A0A0R0IMT3|A0A0R0IMT3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0130600
Domains
12
LotjaGi3g1v0130600.3
– Isocitrate dehydrogenase [NADP]; TAIR: AT1G54340.1 isocitrate dehydrogenase; Swiss-Prot: sp|P50218|IDHC_TOBAC Isocitrate dehydrogenase [NADP]; TrEMBL-Plants: tr|A0A0R0IMT3|A0A0R0IMT3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0130600
Domains
12
LotjaGi3g1v0130600.4
– Isocitrate dehydrogenase [NADP]; TAIR: AT1G54340.1 isocitrate dehydrogenase; Swiss-Prot: sp|P50218|IDHC_TOBAC Isocitrate dehydrogenase [NADP]; TrEMBL-Plants: tr|A0A0B2QN79|A0A0B2QN79_GLYSO Isocitrate dehydrogenase [NADP]; Found in the gene: LotjaGi3g1v0130600
Domains
12
LotjaGi5g1v0080100.1
– Isopropylmalate dehydrogenase; TAIR: AT5G03290.1 isocitrate dehydrogenase V; Swiss-Prot: sp|Q945K7|IDH5_ARATH Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial; TrEMBL-Plants: tr|I3SWL7|I3SWL7_LOTJA Isocitrate dehydrogenase [NAD] subunit, mitochondrial; Found in the gene: LotjaGi5g1v0080100
Domains
11
LotjaGi5g1v0080100.2
– Isopropylmalate dehydrogenase; TAIR: AT5G03290.1 isocitrate dehydrogenase V; Swiss-Prot: sp|Q945K7|IDH5_ARATH Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial; TrEMBL-Plants: tr|I3SPT9|I3SPT9_LOTJA Isocitrate dehydrogenase [NAD] subunit, mitochondrial; Found in the gene: LotjaGi5g1v0080100
Domains
9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF53659 SUPERFAMILY 1 6.25