Domain Predictions — View

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PS00842

Source: ProSitePatterns

Description

XPG protein signature 2.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0016788 View details of GO:0016788 AmiGO InterPro QuickGO	Molecular function	Hydrolase activity, acting on ester bonds	Catalysis of the hydrolysis of any ester bond.	Subterm of GO:0016787

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0043809.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like [Glycine max] gi\|356498232\|ref\|XP_003517957.1\|	Domains Coil G3DSA:1.10.150.20 G3DSA:3.40.50.1010 IPR006084 IPR006086 IPR008918 IPR019974 IPR020045 IPR029060 PF00867 PR00853 PS00842 PTHR11081 PTHR11081:SF1 SM00279 SM00484 SSF47807 SSF88723 cd09904 mobidb-lite	20
Lj5g3v1533400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: flap endonuclease 1-like isoform X3 [Cicer arietinum] gi\|502117445\|ref\|XP_004495823.1\|	Domains Coil G3DSA:3.40.50.1010 IPR006084 IPR006085 IPR006086 IPR019974 IPR023426 IPR029060 MF_00614 PF00752 PF00867 PR00853 PS00842 PTHR11081 PTHR11081:SF30 SM00484 SM00485 SSF88723 cd09867	19
Lj5g3v1533400.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: flap endonuclease 1-like isoform X3 [Cicer arietinum] gi\|502117445\|ref\|XP_004495823.1\|	Domains Coil G3DSA:1.10.150.20 G3DSA:3.40.50.1010 IPR006084 IPR006086 IPR008918 IPR019974 IPR020045 IPR023426 IPR029060 MF_00614 PF00867 PR00853 PS00842 PTHR11081 PTHR11081:SF9 SM00279 SM00484 SSF47807 SSF88723 cd09867 cd09907 mobidb-lite	23
LotjaGi1g1v0605700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Flap endonuclease 1; TAIR: AT3G28030.1 5'-3' exonuclease family protein; Swiss-Prot: sp\|Q9ATY5\|UVH3_ARATH DNA repair protein UVH3; TrEMBL-Plants: tr\|K7K2I9\|K7K2I9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0605700	Domains Coil G3DSA:3.40.50.1010 IPR006084 IPR006086 IPR008918 IPR019974 IPR029060 IPR036279 PF00867 PR00853 PS00842 PTHR16171 PTHR16171:SF7 SM00279 SM00484 SSF47807 SSF88723 cd09868 cd09904 mobidb-lite	20
LotjaGi1g1v0605700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Flap endonuclease 1; TAIR: AT3G28030.1 5'-3' exonuclease family protein; Swiss-Prot: sp\|Q9ATY5\|UVH3_ARATH DNA repair protein UVH3; TrEMBL-Plants: tr\|K7K2I9\|K7K2I9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0605700	Domains Coil G3DSA:3.40.50.1010 IPR001044 IPR006084 IPR006085 IPR006086 IPR008918 IPR019974 IPR029060 IPR036279 PF00752 PF00867 PR00066 PR00853 PS00841 PS00842 PTHR16171 PTHR16171:SF7 SM00279 SM00484 SM00485 SSF47807 SSF88723 cd09868 cd09904 mobidb-lite	26
LotjaGi1g1v0605700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Flap endonuclease 1; TAIR: AT3G28030.1 5'-3' exonuclease family protein; Swiss-Prot: sp\|Q9ATY5\|UVH3_ARATH DNA repair protein UVH3; TrEMBL-Plants: tr\|K7K2I9\|K7K2I9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0605700	Domains Coil G3DSA:3.40.50.1010 IPR001044 IPR006085 IPR006086 IPR008918 IPR019974 IPR029060 IPR036279 PF00752 PF00867 PR00066 PS00841 PS00842 PTHR16171 PTHR16171:SF7 SM00279 SM00484 SM00485 SSF47807 SSF88723 cd09868 cd09904 mobidb-lite	24
LotjaGi5g1v0234800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Flap endonuclease 1; TAIR: AT5G26680.2 5'-3' exonuclease family protein; Swiss-Prot: sp\|C6TEX6\|FEN1_SOYBN Flap endonuclease 1; TrEMBL-Plants: tr\|I3SAA1\|I3SAA1_LOTJA Flap endonuclease 1; Found in the gene: LotjaGi5g1v0234800	Domains Coil G3DSA:3.40.50.1010 IPR002421 IPR006084 IPR006085 IPR006086 IPR008918 IPR019974 IPR023426 IPR029060 IPR036279 MF_00614 PF00752 PF00867 PR00853 PS00842 PTHR11081 PTHR11081:SF56 SM00279 SM00475 SM00484 SM00485 SSF47807 SSF88723 cd09867 cd09907 mobidb-lite	27
LotjaGi5g1v0234800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Flap endonuclease 1; TAIR: AT5G26680.3 5'-3' exonuclease family protein; Swiss-Prot: sp\|C6TEX6\|FEN1_SOYBN Flap endonuclease 1; TrEMBL-Plants: tr\|A0A072VM97\|A0A072VM97_MEDTR Flap endonuclease 1; Found in the gene: LotjaGi5g1v0234800	Domains Coil G3DSA:3.40.50.1010 IPR002421 IPR006084 IPR006085 IPR006086 IPR008918 IPR019974 IPR023426 IPR029060 IPR036279 MF_00614 PF00752 PF00867 PR00853 PS00842 PTHR11081 PTHR11081:SF56 SM00279 SM00475 SM00484 SM00485 SSF47807 SSF88723 cd09867 cd09907	26

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd09907	CDD	1	12.50