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cd15539

Source: CDD

Description

PHD1_AIRE

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 13

Transcript Name Description Predicted domains Domain count
Lj0g3v0100699.1
– PHD finger family protein [Arabidopsis lyrata subsp]. lyrata] gi|297801176|ref|XP_002868472.1|
Domains
23
Lj1g3v4691520.1
– Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|357510879|ref|XP_003625728.1|
Domains
20
Lj3g3v1061160.1
– Histone H3 acetyltransferase IDM1 [Arabidopsis thaliana] gi|15232453|ref|NP_188116.1|
Domains
20
Lj3g3v1114710.1
– Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Arabidopsis thaliana] gi|334184527|ref|NP_180365.6|
Domains
19
Lj3g3v3579340.1
– Chromodomain helicase DNA binding protein [Medicago truncatula] gi|357474041|ref|XP_003607305.1|
Domains
21
Lj5g3v0614410.1
– Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|358346906|ref|XP_003637505.1|
Domains
16
LotjaGi1g1v0683900.1
– RING/FYVE/PHD zinc finger protein; TAIR: AT2G36720.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|K7MZ48|K7MZ48_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0683900
Domains
20
LotjaGi3g1v0158900.1
– Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; TAIR: AT3G14980.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|A0A072VAI1|A0A072VAI1_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi3g1v0158900
Domains
21
LotjaGi3g1v0169800.1
– RING/FYVE/PHD zinc finger protein; TAIR: AT2G27980.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|V7BYM1|V7BYM1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0169800
Domains
19
LotjaGi3g1v0534700.1
– Nucleosome-remodeling factor subunit; TAIR: AT5G12400.1 PHD-finger and DNA binding domain-containing protein; Swiss-Prot: sp|F4JYC8|PTM_ARATH DDT domain-containing protein PTM; TrEMBL-Plants: tr|A0A0B2PNJ8|A0A0B2PNJ8_GLYSO Nucleosome-remodeling factor subunit NURF301; Found in the gene: LotjaGi3g1v0534700
Domains
19
LotjaGi3g1v0534700.2
– Nucleosome-remodeling factor subunit; TAIR: AT5G12400.1 PHD-finger and DNA binding domain-containing protein; Swiss-Prot: sp|F4JYC8|PTM_ARATH DDT domain-containing protein PTM; TrEMBL-Plants: tr|K7LNU7|K7LNU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0534700
Domains
19
LotjaGi5g1v0068600.1
– RING/FYVE/PHD zinc finger protein; TAIR: AT2G37520.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|K7LZH4|K7LZH4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0068600
Domains
23
LotjaGi5g1v0168200.1
– Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; TAIR: AT5G36740.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|A0A1J7HIH7|A0A1J7HIH7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0168200
Domains
21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 7.69