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H15
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Nucleosome | A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Nucleosome assembly | The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA. | ||
| Cellular component | Host cell nucleus | A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | HMG I/Y like protein [Glycine max] gi|351723585|ref|NP_001236260.1| | 16 | ||
| – | 20 | |||
| – | PREDICTED: telomere repeat-binding factor 2-like isoform X1 [Cicer arietinum] gi|502160644|ref|XP_004511827.1| | 20 | ||
| – | HMG I/Y like protein [Glycine max] gi|351723585|ref|NP_001236260.1| | 17 | ||
| – | Histone H1.2 [Arabidopsis thaliana] gi|334184589|ref|NP_001189643.1| | 13 | ||
| – | 13 | |||
| – | Histone H1 [Pisum sativum] gi|556345|gb|AAA50303.1| | 13 | ||
| – | Histone H1; TAIR: AT2G30620.2 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|P08283|H1_PEA Histone H1; TrEMBL-Plants: tr|A0A078GVX6|A0A078GVX6_BRANA BnaA04g17710D protein; Found in the gene: LotjaGi1g1v0712500_LC | 14 | ||
| – | Histone H1; TAIR: AT1G48620.1 high mobility group A5; Swiss-Prot: sp|Q9FYS5|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr|V7CTB3|V7CTB3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0198500 | 17 | ||
| – | Histone H1; TAIR: AT2G18050.1 histone H1-3; Swiss-Prot: sp|P40267|H1_SOLPN Histone H1; TrEMBL-Plants: tr|I3S1P0|I3S1P0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0382800 | 14 | ||
| – | MYB transcription factor; TAIR: AT5G67580.1 Homeodomain-like/winged-helix DNA-binding family protein; Swiss-Prot: sp|Q9FJW5|TRB2_ARATH Telomere repeat-binding factor 2; TrEMBL-Plants: tr|V7CHF9|V7CHF9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0410300 | 21 | ||
| – | Histone H1; TAIR: AT3G18035.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q9FYS5|HMGYA_MAIZE HMG-Y-related protein A; TrEMBL-Plants: tr|Q93YH8|Q93YH8_SOYBN HMG I/Y like protein; Found in the gene: LotjaGi4g1v0463300 | 17 | ||
| – | Histone H1; TAIR: AT2G30620.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|P26569|H12_ARATH Histone H1.2; TrEMBL-Plants: tr|D7LC70|D7LC70_ARALL Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0176500_LC | 14 | ||
| – | Histone H1; TAIR: AT2G30620.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|P26569|H12_ARATH Histone H1.2; TrEMBL-Plants: tr|I1LBM9|I1LBM9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0211600_LC | 14 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 7.14 |