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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2578250 |
| Transcript ID | Lj4g3v2578250.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Rhg4-like receptor kinase II [Glycine max] gi|90655934|gb|ABD96566.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| SignalP | 1 | 32 | 32 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 32 | 32 | – | – | |
| PANTHER | 6 | 130 | 125 | 0 | – | |
| PANTHER | 6 | 130 | 125 | 0 | – | |
| Phobius | 6 | 24 | 19 | – | – | |
| TMHMM | 7 | 24 | 18 | – | – | |
| Phobius | 25 | 32 | 8 | – | – | |
| Phobius | 33 | 491 | 459 | – | – | |
| Pfam | 35 | 69 | 35 | 3.90E-05 | ||
| Gene3D | 36 | 310 | 275 | 7.80E-54 | ||
| SUPERFAMILY | 40 | 310 | 271 | 6.01E-52 | ||
| Pfam | 96 | 154 | 59 | 6.60E-07 | ||
| ProSiteProfiles | 97 | 119 | 23 | 7.319 | ||
| SMART | 118 | 141 | 24 | 7.2 | ||
| ProSiteProfiles | 120 | 141 | 22 | 4.693 | ||
| SMART | 142 | 168 | 27 | 390 | ||
| ProSiteProfiles | 144 | 166 | 23 | 5.255 | ||
| SMART | 193 | 216 | 24 | 100 | ||
| ProSiteProfiles | 195 | 217 | 23 | 4.524 | ||
| PANTHER | 231 | 323 | 93 | 0 | – | |
| PANTHER | 231 | 323 | 93 | 0 | – | |
| ProSiteProfiles | 243 | 265 | 23 | 4.901 | ||
| ProSiteProfiles | 266 | 287 | 22 | 4.793 | ||
| Gene3D | 335 | 440 | 106 | 5.80E-20 | ||
| Pfam | 337 | 369 | 33 | 0.12 | ||
| SUPERFAMILY | 371 | 441 | 71 | 6.01E-52 | ||
| Pfam | 377 | 432 | 56 | 6.30E-07 | ||
| SMART | 395 | 419 | 25 | 18 | ||
| ProSiteProfiles | 397 | 420 | 24 | 6.657 | ||
| ProSiteProfiles | 421 | 443 | 23 | 5.356 | ||
| PANTHER | 431 | 532 | 102 | 0 | – | |
| PANTHER | 431 | 532 | 102 | 0 | – | |
| MobiDBLite | 456 | 485 | 30 | – | – | |
| Gene3D | 479 | 594 | 116 | 2.70E-08 | ||
| TMHMM | 488 | 510 | 23 | – | – | |
| Phobius | 492 | 516 | 25 | – | – | |
| Phobius | 517 | 935 | 419 | – | – | |
| PANTHER | 563 | 895 | 333 | 0 | – | |
| PANTHER | 563 | 895 | 333 | 0 | – | |
| SUPERFAMILY | 563 | 863 | 301 | 9.45E-79 | ||
| ProSiteProfiles | 587 | 867 | 281 | 41.46 | ||
| SMART | 587 | 867 | 281 | 5.30E-44 | ||
| Pfam | 590 | 861 | 272 | 6.30E-48 | ||
| ProSitePatterns | 593 | 615 | 23 | – | ||
| CDD | 593 | 863 | 271 | 5.84E-91 | – | |
| Gene3D | 595 | 650 | 56 | 6.30E-27 | – | |
| Gene3D | 651 | 865 | 215 | 4.60E-45 | – | |
| ProSitePatterns | 712 | 724 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj4g3v2578250.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2578250.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.