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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0004400 |
| Transcript ID | LotjaGi1g1v0004400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | E3 ubiquitin-protein ligase orthrus-like protein; TAIR: AT1G57820.1 Zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q8VYZ0|ORTH2_ARATH E3 ubiquitin-protein ligase ORTHRUS 2; TrEMBL-Plants: tr|I1JJU5|I1JJU5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0004400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:804738..813954) extracted from Lotus japonicus Gifu genome v1.2.
GTTGTTTTCGCCGCCCGTGACTACTCAATGTGTGCTTGATTATAAGTTGTTCATCATTTACATACGACCTAAGATGCGCC ATGCGATATGGATGCAATTGTTACTCTTGGCTGAATGAACTTCTGAATGCTGTCAACAATCAAACAAGCCATCAGCTTCA TATTTGAGCAAGGGCGTCTACACGGTTAGCATTTTATTATTCACGCCTAGCATTTGTCTTTCTTTCGCATTATGCAATTT TCTTTCTTCTTGTTTGTTTTCCATGCTTCCATGGTCTTATGTGGATGATAGAATTAAATCATATGTGATTAGAAAAACTT ATTCCAAAAGATAAAAAATTCTCAGCATCATATGCGACAATCAATCGCAACTCAGGGGTTTCATAAGGAATTAAAAAAAA AAAAATATTGTGATGGGTTATCAACAACCAATATTTATCTAAGAAGCATATCGTGTCATGTATTGGATTATGGCGGTGGG TTGAGTTGATTTCAATCCTCGAACCGAACAACCAACATTATATCCTATTTTACAACCAATCGCCGCCAACACGTAATTAC CATAAACCATTTGCATTAGTTCTTTTTTCTTACATCTTCAAAATACATATCAATCTCCTCCAAGTAGTTGGAGGAGGAGG GTAACAAACACGACTAGAGCGGATAAGAGAGAAAGAGGGAGTGAAGGAGAGAGAATACAAAGTGTGGTCCAACAACTATG CCAATGACCGAGAAACTAGGGACGTTCGTTCGAGAGAGGAATAGATTCGAAGAGGTGAGAGAACGATAAATAAGAAATTT ATTGGTTTTCAAACTATATGAGATTTGTTTTAAAAGTGACTTAAATATAATTTCAACAACATTTTACCTAGCAAAAATCA CCAAACTATATATTTTTTGCAAACCATAATTTGTCTTGTTTATCGCGTAGCGAGTTGCGGGTTGTGTTGAAAAAAGACCA AAGCGAGGTGAAACATCACCTAAAACTCCATTGTTGCAGAAAAGTCAACAAAGTATAGAAAAATAAGGGGGATGACGTGT CAGCTCACTCTGCCCCCACTCATGGCCTATCGAGTCAGAGTTTTATTAAAGGGCGAGTTGGTGAGTAAGAAAATCCAACG AAATTGTTTAAGTTTCCATATTAAATTGACTAATTATATAGTGGTATTATGAATCTTGAGATATGTGAATGCGTTTGTGA ATGATGAGTGGGATGGGGTGGTTTTAACTGATATCAAGAACCATGGAGAAAAGGAATATGAATCGATTCGCAGGTGAAAG TTTCGTGGCTCAAAACTCTTTTTTTTCATACAGACATGATTTGTATCATCTCTTTATCCCCCCTCTTAGTTCTATTTCTA ACATATAAAAAATTAGTAGCATCTTATCGCAACTCATTAGACTAGTTTGTTTTCTGATATGCTTTATAAATGAATTGTGT AGATATTTGACATCTTCAACTACCTGCATGGCGTTGTATTGGCCAAAGTCGATGTTTTCAATAGAGAGGGAGAAAATGAG AGAAAGTAAGTGATATACCTTAATTTTATAAACCACTAAAAACTTAAAAATATTGTATAAACGGTTATTGTCGGTCAATT TTTTCTCTTTACCATCATGATCCCGATGAATCAAATTTTCACCATAACCTTCACCTCTTTATAAAGCCGCTAAATTTTAC CATGCATTTACCTTGTCTATATTAAGGGCCATAATTACTTTTTCCTCTGCTCACATAAGCCTTTAAACCTAGTTGTTTTC GCCGCCCGTGATTACTCAATGTGTGCTTGTCTATAAGTTGTTCATCATTTGCATACGACCTAAGATGCGCTATGCGATAT GGATGCAATTGTTACTCTTGGCTGAATGAACTTCCGAACATTGTCAACAAGTGATCAAATAGGCCATCAGCTTCATATTT GAGCAAGGGCGTCTACAAGGTTAGCATTTTATTATTTCTTTATTATTTAAGCCTAGCATTGGTCTTTCTTTCGCATTATG CAATTTTCTTTCTTCTTGTTTGTTTTCCATGCTTCCATAGTCTTATGTGGATGATAGAATTAAATCATATGCGGTTAGAA AAACTTATTCCAAAAGATAAAAAAATTCTCAGCATCATATGCGACAATCAATCGCAACTGAGGGGTTTCATAAGGAATTA TATAAAAAATCTTGTGATGGGTTATCAACAACCAATATTTATCTAAGAAGCATATCGCGTCATGTATTGGATTATGGATG TGGGTTGAGTTGATTGCAATTCTCGAACCGAACAATCAACATCATATCCTATTCTACAACCAATCGCAGCCAACACCTAA TTACCATATACCATTTGCATTAGTTCTTTCTTCTTACATCTTCACAATACATATCAATCTCCTCCAAGTTGGAGGGGGAA CAGACACGAGTAGAGCGGATATGAGAGAAAGAGGGAGTGAAGGAGAGAGAATACAAGGTGGGGTCCAACAACTAAGCCAA TGACCGAGAAACCAGGGACGTTCGTTCGAGAGAGGAAGAATAGATCCGGAGAGGTGAAAGAACGATAAAAAAGAAATTTA TTGATTTTCAAACTATATGAGATTTGTTTTAAAAATGACTTAAATATAATTTCAATAACACTTTACCTAGCAAAGCTCAC AACCACCTCAGATGAGACCCATTGTTTTATAATATACATTTATTGTTGATTTTTTTTATTACATGGCTAAGAAAAGACAT TTTTTTACACCATTAACGCATGTATATTATTCTCTCTTTTTCTAAAATTCATAAAATAACAATTTAAACATTACTCTCGT ACAATTTAGTGAATCGTGCACATATTGTGCACATATTTTAGCCAATTAAAATATTACTCTTCGAATGATAGCTCAAGTGG TAAGAGTTAAAGAACATAAAAGTTGGTTAGGTAGGTTTATGGTTCAATCCCTGGAGAATATAATTTATTTTTCCGATGTA AAAAAAAAATCCAAACTATGTGATACTTATCATCAATAGTTTTGAAGCGGGATAATAAACAGAGAAAATACCTATATGAT AAAAAAAAAAACAAATCTATAAAATTAGTTAAAATTATTTACTAAAATTTCAATTAAAAATATTCAGATCTCCTTTGCAT AATTGCATGTATAAGACAATATGATTGAAGTAAATAAAAATTTTCTAAAAGCAAAAGTTAAGGCAATAGGGTTACCCCAC TTTTTTATTTATTTAGGCCTTATAGAAACATTTCTAAACCTACCTACTTGAGTACTTACATAGTACTTTTATTATTTTCT ATAATACTAGGTAAAGTAAGATGTCGCCACTCGTAGAGTCTTCCTGGTTTCAAGAAATGTTGGTATAACAATAAATTGTA ATTGGTTATATGAAAATAGAATCCAACAAAAAATTGAGTTGTCGCTCTGCATATATATATATATATATATATATTTTTCT TTGTCTTTTTTGCTTAGTTCATAAATTATCTTACTTGATGTTACATTTCAAAAAAAAAATCTTAATTGATATCACATTGC CGGTTACAAAAATGTGGTTACATTAGGCGGTTCAAAAAATTATTACCAACTCAAATTCAATGTATCCGATAAAATTGAAT TCGAACAACCTGTAGCAATTAATCAGTCGGTGGCAGGTCTTAATGTTTTGATGTTTTTCACCCGACAAAACTGATTATTT TGACATCTCTTCCGATTGAAACCGGCTGATTAACATCTCTTCCCTCAAACCCATTTAAATGATTCATACCTTCAATTACC CCCACCACAAACTTTGTTGTTTGACTTTCTAAAGATACAACATTTTCTTATTACAATTATCCACTTCCCACAATTTTACA TTAAATGTTAGTATTCATTTTTAGAGCTAGTTGTTGATATTATTAATGGCATAGTTGAAATAGTTTTTTTTTTCTATGAA TATTATAAAAAATACAATGTTAAATCGTGTGAAAAATAAATGGTTAAATAATTATTTAATTACTTATGTAGAGAAATGTC GGATAGTGTAAAAATAAAAAAACCAAGTGTTATAAAAAAAATGAAAACACATATTATAAACTCTTTTGCAATTTTCATTC TTTGGTTTGATTTTTTTTTGCGTTCTTGCTTTTTTGTATTGTTTGAGTTTGACTTTGTATTGCATCATTTGTCAAAAAGA CTTGTTCTTAACTCCCTTTAATTCAATAAACTTTTGCATAACAGAATACACATTCAAACGGTAATACATTTTTTTTTTGG TACATGAAAAAGCTAAAAACAAAGACAAAAGAAAACACCAGAACAAAACTAGACACACTCTAACAGAGGAGCAATCTCTG GAGGAGGTGTGGACCACATAGAGAAATCTAAACTAAGGCTTAAACCCATCCTTTGAGGATGACGATGGAGAGATACTTCC CGCTCTTGATGCATCAAAGTGCTTGCTTTCGCCAAATATGCATCACAAGAATATAGATTATGTGATCAGTGAGAGCTTTT ACAACCTCCAAATAGGGGTGAGAATAAGTTGGGCCTAGGTAGACTTTGCGTAAATAGGTATATCCTGTTTAAAAATCTTA AAGCTTGAGCCTGACTTGTGACCTGTCAAATGTTTTTTTTCGAGCCTGATCTGACATTTCTAAAAGCTTGATTTGACTTG TTTAAAGGCTCGTTTCAAAATAAGAGTTTTACGTTTGTTAACAAACTTATCTGGAAAGAAACTATCAAACTTATAAGCCT ACAAACAGTCTAGCCTATTCCCACCCCTATCTCCAAACAATCAGAGAGACATATAAGCTTCAAATAGGTTTTTAAAAAAG TTTATAAATAGCCGATTTATATATGATATTAAAATTACCTATTGATATTTAATTTATTGCATTTGAATAGAAACAGATAA TAGTTGTTCGGTTGTTCCATCCATTAATGATAGAGAGTCAAATAGGCAAGGCCATAGTAGAAAATGAAAAGAAACAGAAG TAGAAGTGGTGGGAAAGTAAAAAGGAATTAGGAGGAGGAGGAGGAGGGAAACTGAAAAGATGGCGAAATTGAAGGGAGGG AAAATTGTGAAAAAGTTCAAAACCATGATCCCCCATTTCCCTCCCCTCAATAGATTTAGAAATAAAATATAGTATTTAAT ATCTAGTTTGTTTTCTTCATATTTAAAAACCTTTCAGATTTCATTCATTCTGATTCAACTCTTTCTCTTCCCCCAAAAAG TTGAAACCCCAACGACCCACTCTCAACTCTCCAGATGGCTCACCACCTTCCATGCGACGCCGACGGCACATGCATGCTCT GCAAACTCAAACCTCCTCCTTCCGAAACTCTGCAGTGCCACACCTGCATTACCCCGTGGCATCTTCCCTGCCTCCCAACC CCTCCCGCCTCTTTTGTCAACTGGGACTGCCCTGACTGCTCCTCCTCCATCTCCGATTTCCATGCTCCCGCTCCTGCTCC CTCCGCCGGCGCCGATCTCGTCTCCGCCATCCGCGCCATCGACTCCGATGCCTCCCTCACTGACCAACAGAAGGCCAAGA AGAAACAGGAACTCGTCGGCGGCCCGTCATCAGGTGAAAAACCCCCCGCCGCCGGTGGAATCCTCGACGGCAGCATCAAT TGCTCCTTCTGCATGCAGTTACCAGATAGACCCGTCACGGTTCGTTTCAACCCTTTCTTGCTTTTCTTTCAACTGAACCG TTTGATTTTGATTTTCCGGCGTGTTTCAGACTCCTTGCGGCCACAATTTCTGCTTGAAATGCTTTGAGAAATGGATTGGT CAAGGGAAACGGACATGCGCTAACTGCCGGCGAGATATTCCGGCGAAGATAGCTTCACAGCCGCGTATCAACTCTCAGTT AGCCATTGCGATTCGGTTGGCGAAGCTTGCGAAATCGGAAGGGAAGGTGTCTGGTGAGCCGAAGATTTACCATTTTATGA GGAACCAGGACCGGCCAGACAAGGCGTTTACCACTGATAGGGCTAAGAAGACTGGGAAGGCGAATGCCTGCAGTGGGAAG ATTTTTGTGACTGTTCCTCCTGACCATTTTGGACCTATTCCTGCTGAGAATGACCCGACCCGGAACCAGGGTGTTTTGGT GGGGGAGACTTGGGAGGACAGGATGGAGTGTAGGCAGTGGGGTGCTCATCTTCCTCATGTTGCTGGTATTGCTGGCCAGA GCACGTATGGTGCTCAGTCTGTGGCGCTTTCTGGTGGTTACATTGACGATGAGGATCATGGGGAGTGGTTCCTTTACACT GGTAGTGGTGGGAGGGATCTAAGTGGAAACAAGCGGACTAATAAGCTTCAGTCATTTGACCAGAAGTTTGAGAATATGAA CGAGGCATTGAGACTGAGTTGTCGCAAAGGATACCCTGTTCGTGTTGTCAGGTTATTTGTTTCCTCCTCCTCTACTTTTT ATTTAGTTTTGTTTTGTTGTGATGCATATAAGGTAGTAATATATTTGGAGACCATGTTGTGTAGTGTAATTGTATATGTG CTCTATAAGGAAACTAGTTCATATACACTAATACATTTTGAAGTTAATAGAGAAAAGTGATACACATGATGTGTAATATG ATATCAAGTGATACCAAGAGAGGGATGAAAAGATGTAATGTATGTGTTGTGAAGAATTGAAGATTGATCTTATAATTTGT GTATACCTGTGATATATAATATGATTGAAGTTGCTAGAGATAGAGATAAGATGGAGTGCATGTGTATTGTCTAAAACATG AGAATGACTTTATAATTTGTGTATAAATAATGTATGATATGATATGGTGTGGTATAAAGCCAGAAGAGATAGATTAAAGT GGAGTTTACATAGATTGTCTAAAACATGAAATTGACTTAATAATTTGCATATACATGTAATATGTGATATGATATGATGG GAAGCTAGGGGAAATTGTGATAAAGATAGAGTGTTTGTGGATTGTCTAAACTGAGATTGATTTTGTAATGTGTTCATCTG ATCTGACATATCTTTTTTCTCATTCCTTGGAGTCAGGTCCCACAAGGAGAAGCGATCTTCCTATGCACCAGAGTCTGGAG TGCGATATGATGGTGTTTACAGAATTGAGAAATGCTGGCGTAAAAATGGAATACAAGTAAGATTGGTTCTAGAAATAGTC GTAGTGTTTATTAATTAAAGTACATGCTAGATTCTGAACTAGGTGCTTTCTGTTTTTGTGACAGGGTTGCAAGGTTTGCA GATATTTGTTTGTCAGATGTGACAATGAGCCAGCTCCGTGGACAACGTTAGTTGCTTTTTATACATGATGTGTCCGTGTT TGTGTGTCCATATACACAACTCTGAGATTATGTTTGATAATTTCAATGCATTTTGGTGATATGCAGCGATGATGTTGGAG ACCGTCCCCGCCCTCTGCCTAAAATTGATGAATTGAAGGGCGCTGTTGATATAACTGAAAGGAAGGGTGATCCTTCATGG GATTTTGATGTATGTTATATTATCTACTGACTCTACAAGTTTTTCCAACAATATTTTCTTCATTGCTTTCTAGATCATGG TTCTATTGCTTAGTTAGATAAGATATTCATGTTTTTATACCCTTGATTTTGGCTAAATTTTAAACTAGTTGGATATATTT GTAATGTTGTCCTACGTACCATTGCTGTTCTTTAGATTCGAGATGTCTCACTCAGCATTTGATTAAATTTCAGGAGGAAA AGGGTTCCTGGTTGTGGAAGAAGCCTCCCCCAGCAAGCAAGAAATCCATAGATGTAATCAACCCTAAAGATGGCACAAGA GTAAGAGTTAAAAAAACCAAAAATGTATCTCTCAAAGAAAAGCTGTTGAAAGGTATGTGTTCTGTTCCTTAGTATCTCCT GCATAGGCAACTCCTAACTTTTCTTCCTTTGTTAAATCTGTGTTATCTGAAGCTGTTGATGTTATTAATATAGTAGCATT GAACATGTTTGATTACTTATTATGATTTGGCCTCTGGTGTCATTAATTTTGCAGAGTTTGGTTGCAATATCTGCCACAAG GTTTTGTCTTCCCCTCTCACAACTCCTTGTGCTCACAACTTCTGCAAGGTCTGCCTGGAGGGTGCCTTTTCTGGCAAAAG TTTCATCAGGAAGAGGGCATGTGAAGGTGGACGCTCTTTACGAGCTCAGAAGAACGTTATGAAATGCCCATCATGTTCAA ATGACATAGCTGATTTTCTTCAGAATCCACAGGTACAGCAGTATGATTATTGAATAAATGTTTGATTTGGTTGGATTTAG TATATAATATCTGTGTTCTTAGTTGCTGGATTGCATTAATTATTTGTAGCTAGATCAATAATTATTTTGTCATCAGATTT TATGTTTGCACCAACCATGTATGGATTGATTAATATCTCATCCTTATTTGGATTCCTTTTAATTGTGTTCCTATTTTACT GTGAAATGCTGAAGAAAATGAGCAGAAGGTTGACCTTGTAAATACTGGAAAACATTTTAAACTATGATGGTTTAGCTTAT AGATAATCTTTTATTGCATTAAGCCCTTATGTGATAAGGTCATAAACTATTTAATTAAGCTTAGTCTGTAATATTAAAAT CTATCACTTGTTTTTCTACAGGTTAACAGAGAAATGATGGGTGTTGTAGAATCACTCCAGAGCCAGATTGCACAAGACGA GAATTCTGAACAGGTGGAGAACTCAGAAGAGTTGAGTGACAAAAGTGATGAAATTGTCAAGAATGTGCCTGATGAGGTAG AAGTTTCAAAACCCTGTGATGATTCAACTGAAAGTGATGAAAATGTGAAGAATGTGACTGATGAGGTAGAAGTTTTAAAA TCCTGTGATTCAACTGAAAAAGTATTGGAGGAGATTAATGACAATGATCTGAATCGGCCGCACAAGCGAAGGAAAGGTGC TGGGGTGATTGATGAGGCACCGGAACTAGAAGATACCATAAAGGCTTGCAATTAAAAGGTGATGGTAATGTATTGCGGCG AGCTATTTTGGTTATTTTGATTTGCATTATTAGTATTGGTGGTGCAAAGTGAATTTTTAAGGGCTATAGCTCTTAGCCAT GACTTTATATGGCATTTTGGAACTTTTTTCTTTAATTTGGTGGTTAAATGGGATTGAGAATTGGAGACTCCTTCTATCCG TAGGTTTCATATGGTAAATGAGATCAAGAATGAATATATCTTACATTGTTGCATATTTGATGGTTGCCTTATGTTCTAAA CGTCAATTACAATCAAA
CDS sequence (LotjaGi1g1v0004400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCACCACCTTCCATGCGACGCCGACGGCACATGCATGCTCTGCAAACTCAAACCTCCTCCTTCCGAAACTCTGCA GTGCCACACCTGCATTACCCCGTGGCATCTTCCCTGCCTCCCAACCCCTCCCGCCTCTTTTGTCAACTGGGACTGCCCTG ACTGCTCCTCCTCCATCTCCGATTTCCATGCTCCCGCTCCTGCTCCCTCCGCCGGCGCCGATCTCGTCTCCGCCATCCGC GCCATCGACTCCGATGCCTCCCTCACTGACCAACAGAAGGCCAAGAAGAAACAGGAACTCGTCGGCGGCCCGTCATCAGG TGAAAAACCCCCCGCCGCCGGTGGAATCCTCGACGGCAGCATCAATTGCTCCTTCTGCATGCAGTTACCAGATAGACCCG TCACGACTCCTTGCGGCCACAATTTCTGCTTGAAATGCTTTGAGAAATGGATTGGTCAAGGGAAACGGACATGCGCTAAC TGCCGGCGAGATATTCCGGCGAAGATAGCTTCACAGCCGCGTATCAACTCTCAGTTAGCCATTGCGATTCGGTTGGCGAA GCTTGCGAAATCGGAAGGGAAGGTGTCTGGTGAGCCGAAGATTTACCATTTTATGAGGAACCAGGACCGGCCAGACAAGG CGTTTACCACTGATAGGGCTAAGAAGACTGGGAAGGCGAATGCCTGCAGTGGGAAGATTTTTGTGACTGTTCCTCCTGAC CATTTTGGACCTATTCCTGCTGAGAATGACCCGACCCGGAACCAGGGTGTTTTGGTGGGGGAGACTTGGGAGGACAGGAT GGAGTGTAGGCAGTGGGGTGCTCATCTTCCTCATGTTGCTGGTATTGCTGGCCAGAGCACGTATGGTGCTCAGTCTGTGG CGCTTTCTGGTGGTTACATTGACGATGAGGATCATGGGGAGTGGTTCCTTTACACTGGTAGTGGTGGGAGGGATCTAAGT GGAAACAAGCGGACTAATAAGCTTCAGTCATTTGACCAGAAGTTTGAGAATATGAACGAGGCATTGAGACTGAGTTGTCG CAAAGGATACCCTGTTCGTGTTGTCAGGTCCCACAAGGAGAAGCGATCTTCCTATGCACCAGAGTCTGGAGTGCGATATG ATGGTGTTTACAGAATTGAGAAATGCTGGCGTAAAAATGGAATACAAGGTTGCAAGGTTTGCAGATATTTGTTTGTCAGA TGTGACAATGAGCCAGCTCCGTGGACAACCGATGATGTTGGAGACCGTCCCCGCCCTCTGCCTAAAATTGATGAATTGAA GGGCGCTGTTGATATAACTGAAAGGAAGGGTGATCCTTCATGGGATTTTGATGAGGAAAAGGGTTCCTGGTTGTGGAAGA AGCCTCCCCCAGCAAGCAAGAAATCCATAGATGTAATCAACCCTAAAGATGGCACAAGAGTAAGAGTTAAAAAAACCAAA AATGTATCTCTCAAAGAAAAGCTGTTGAAAGAGTTTGGTTGCAATATCTGCCACAAGGTTTTGTCTTCCCCTCTCACAAC TCCTTGTGCTCACAACTTCTGCAAGGTCTGCCTGGAGGGTGCCTTTTCTGGCAAAAGTTTCATCAGGAAGAGGGCATGTG AAGGTGGACGCTCTTTACGAGCTCAGAAGAACGTTATGAAATGCCCATCATGTTCAAATGACATAGCTGATTTTCTTCAG AATCCACAGGTTAACAGAGAAATGATGGGTGTTGTAGAATCACTCCAGAGCCAGATTGCACAAGACGAGAATTCTGAACA GGTGGAGAACTCAGAAGAGTTGAGTGACAAAAGTGATGAAATTGTCAAGAATGTGCCTGATGAGGTAGAAGTTTCAAAAC CCTGTGATGATTCAACTGAAAGTGATGAAAATGTGAAGAATGTGACTGATGAGGTAGAAGTTTTAAAATCCTGTGATTCA ACTGAAAAAGTATTGGAGGAGATTAATGACAATGATCTGAATCGGCCGCACAAGCGAAGGAAAGGTGCTGGGGTGATTGA TGAGGCACCGGAACTAGAAGATACCATAAAGGCTTGCAATTAA
Protein sequence (LotjaGi1g1v0004400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAHHLPCDADGTCMLCKLKPPPSETLQCHTCITPWHLPCLPTPPASFVNWDCPDCSSSISDFHAPAPAPSAGADLVSAIR AIDSDASLTDQQKAKKKQELVGGPSSGEKPPAAGGILDGSINCSFCMQLPDRPVTTPCGHNFCLKCFEKWIGQGKRTCAN CRRDIPAKIASQPRINSQLAIAIRLAKLAKSEGKVSGEPKIYHFMRNQDRPDKAFTTDRAKKTGKANACSGKIFVTVPPD HFGPIPAENDPTRNQGVLVGETWEDRMECRQWGAHLPHVAGIAGQSTYGAQSVALSGGYIDDEDHGEWFLYTGSGGRDLS GNKRTNKLQSFDQKFENMNEALRLSCRKGYPVRVVRSHKEKRSSYAPESGVRYDGVYRIEKCWRKNGIQGCKVCRYLFVR CDNEPAPWTTDDVGDRPRPLPKIDELKGAVDITERKGDPSWDFDEEKGSWLWKKPPPASKKSIDVINPKDGTRVRVKKTK NVSLKEKLLKEFGCNICHKVLSSPLTTPCAHNFCKVCLEGAFSGKSFIRKRACEGGRSLRAQKNVMKCPSCSNDIADFLQ NPQVNREMMGVVESLQSQIAQDENSEQVENSEELSDKSDEIVKNVPDEVEVSKPCDDSTESDENVKNVTDEVEVLKSCDS TEKVLEEINDNDLNRPHKRRKGAGVIDEAPELEDTIKACN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 626 | 625 | 0.0 | – | |
| PANTHER | 2 | 626 | 625 | 0.0 | – | |
| SUPERFAMILY | 3 | 60 | 58 | 1.64E-6 | ||
| SMART | 12 | 56 | 45 | 5.6E-5 | ||
| ProSitePatterns | 13 | 55 | 43 | - | ||
| Gene3D | 74 | 190 | 117 | 7.3E-18 | ||
| MobiDBLite | 87 | 111 | 25 | - | – | |
| SUPERFAMILY | 118 | 167 | 50 | 6.19E-15 | – | |
| Pfam | 122 | 166 | 45 | 5.7E-8 | – | |
| CDD | 123 | 161 | 39 | 1.50276E-9 | – | |
| SMART | 123 | 161 | 39 | 5.2E-6 | ||
| ProSiteProfiles | 123 | 162 | 40 | 11.589 | ||
| Gene3D | 223 | 421 | 199 | 1.6E-72 | ||
| SUPERFAMILY | 226 | 420 | 195 | 1.91E-69 | ||
| SMART | 247 | 404 | 158 | 2.1E-79 | ||
| ProSiteProfiles | 252 | 400 | 149 | 51.394 | ||
| Pfam | 254 | 403 | 150 | 2.8E-51 | ||
| SUPERFAMILY | 477 | 586 | 110 | 2.15E-10 | – | |
| Gene3D | 480 | 604 | 125 | 6.2E-15 | ||
| ProSiteProfiles | 494 | 552 | 59 | 10.262 | ||
| SMART | 494 | 551 | 58 | 9.0E-6 | ||
| Pfam | 494 | 549 | 56 | 5.0E-6 | ||
| ProSitePatterns | 509 | 518 | 10 | - | ||
| Coils | 669 | 680 | 12 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0004400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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