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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0008200 |
| Transcript ID | LotjaGi3g1v0008200.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pre-mRNA-processing-splicing factor 8; TAIR: AT1G80070.1 Pre-mRNA-processing-splicing factor; Swiss-Prot: sp|Q9SSD2|PRP8A_ARATH Pre-mRNA-processing-splicing factor 8A; TrEMBL-Plants: tr|V7BXW4|V7BXW4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0008200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:920193..932690) extracted from Lotus japonicus Gifu genome v1.2.
TTGAATCCTAGCCATCGAGTTCAATAAAAACCAATTTCACAACTCAATCTCTCGTTTCCGCTTCTAGTTCTTCTCACACT GCCATTTTCACTTTCACACACCACTCATAAACCCTAGAACTCGAAACCCCATTCACTCACTGCTAGAACCCTCTCTAGCG TCTCGATTCAATCCATGAACACCACCACTCTCTGAATCAAAAACTCCCAATCATTCAATTGATCGACCACAGTTTTTTCA AGATGTGGAACAACGGCCAGATTGCGCCACCGGGGACTTCTGTCCCTTCTATTCCTCCGCCTCAGGCGGCGCAACCGTCG TACACCGTGCTTCCACCTCCGCCCCCGGCCCCTGTGGAGACTGAGGCCGATGCGGAGGCTAGGCTTGAAGAGAAGGCGAG GAAGTGGCAGCAGTTGAACTCGAAGCGTTATAGTGATAAGAGGAAGTTCGGGTTCGTTGAGACTCAGAAAGAGGACATGC CCCCTGAACATGTCAGGAAAATTATCAGGCAAGTGTTGTTCTCTCTGGATTTCCTTGGCGATTTGTTGCTACTGTTTTGT TCTGAATCTTGAAATTTTCGGTTGTAGCTTTCTAATTTTCATTTGCCTAGGAAATAATAGCTGGTTCTTGAACTTAGTTA TGAAGTTGTAGAAGTTATGAAGTCTGATGTTGAAATTACTTGATTGTGCTGGCTGAAGGATGCTTGGATATTACACTTGT TTGGGTTAGCTGACAAGATTTATTTGTTCCGAATCGTGAACTCGGAAAATGATTATTCGAAGCGCTATTCCCCCTTTTTA ATTTTGTAGGTTTTTTTGTGTGAGTGTAAAGCTTTCTAAGTTTGAATGATGCTCATGGTTAGCCAGATAGATAGGTGTAG AGCCTTCACTGTTTTATATTAAGTTAGTTGATGCTGGGCATGTAGCATAGGATGGTTTTTTTTTAAGATTTTGATTTGGG TTGTTTTCTATCTTGTATGATACATTACTTACTAATATGGTTTTTCAAGTAGTAATTTTCCTCTTGCTGTTCTTCATTTC AGGGATCATGGGGATATGTCCTCGAAGAAATTTCGTCATGATAAACGTGTTTATCTCGGGGCACTTAAATTCATACCACA TGCAGTTTACAAGCTCCTGGAAAATATGCCCATGCCGTGGGAGCAGGTTCTCTGCATTTTTCCAGTTCTTGTTATTTCTT CAATTTTAGCAGTGCATGTTTTCTTCCACTTATTTGATTCTCTGTGTTGTCCCATGCTAATACCATCATGAATCTGCTTT TGTGAATGTAGGTCCGAGATATCAAGGTTTTGTACCATATTTCTGGGGCTATCACATTTGTCAATGAAATACCTTGGGTT GTGGAGCCTATTTATCTGGCTCAGGTTTGTTGTTCTCTTTTCCCTATAAAACCTGCTATACTGTGTATGATCCTTATACA TCCTTTCTTACCTTAATGATTCTCAATTGATAAACTATTGTCTGTTATGCAGTGGGGTACAATGTGGATCATGATGAGAA GGGAGAAAAGGGATCGTCGTCACTTTAAGAGGATGCGATTTCCCCCATTTGATGACGAGGAGCCTCCTCTTGACTATGCT GATAATCTTTTGGATGTTGATCCTCTAGAGCCAATTCAACTGGAGCTCGATGAAGAAGAAGATTCTGCTGTATATACTTG GTTTTATGATCACAAGCCTCTTGTTAAAACAAAGCTCATAAATGGTCCTAGTTACCGGAAATGGCATCTTTCTCTTCCTA TAATGGCTACTTTGCATCGGCTCGCTGGGCAGCTTCTGTCTGATTTGATCGACCGCAATTACTTTTACTTGTTTGACATG GAGTCTTTTTTTACGGCAAAGGCTTTGAACATGTGCATACCTGGTACTTGGATTTCTTTCTTTCTATTTTTTTATGCTAA ACAAACATTTGAACCTTTCTTGTTATTTATTGGGTTAGGTTTTGATCAAGTTTAAGATCACATCAAGCTAGATATTGGTA ATTATAAAACTACTAGGTAACTATGCTGATCATTAAGCATACTGAACTTTTGTTGGTTGACCTATCTGTTTCAACTTTCC TTTATGTTCATGTCCCTTGAGTTTTAGGAATTGATTTAAAATTTAATTTAAGCATGATTTTCTCAACTGTGTATGTAAAA TACTGTACAAATCATCTAAAAAAATACACAGAAATATTTCAGATCTGCTTCCTTTGATTGAACTTTTGAGGCCATGGAAA CTTGTGATGCATATAATATTAGGCATGTTATAACAATATGGAATTCAGAATCTTGCACTGATTTTTGTGTTTTCTCTGCT CTCCAGGTGGCCCTAAGTTTGAGCCTCTCTACCGTGACATGGAGAAGGGAGATGAGGACTGGAATGAGTTTAATGACATC AATAAGCTCATTATAAGGTCCCCACTTCGGACAGAGTACAGAATTGCTTTCCCTCATCTTTATAACAACAGGCCTCGCAA AGTAAAGCTTTGTATCTACCATACTCCCATGATCATGTACATAAAAACTGAAGATCCTGATCTACCTGCATTCTATTATG ATCCCTTGATACACCCAATAACCAGTGCTAACAAGGATCGACGGGAGAAGAGAATCCATGATGAGGATGATGATGATGAT TGGATATTGCCAGATGGTGTGGAACCTTTACTTAAAGATACACAGCTATATACAGACACCACAGCTGCTGGAATATCCTT GCTGTTTGCTCCTCGTCCTTTTAATATGAGATCTGGTCGGATGAGGCGGGCTGAAGATATTCCTCTTGTGTCAGAATGGT ATAAGGAGCATTGGTAAGTTGTACCCTCCCTCCCTTGCATGATTTATAGATTATCTTTAATAATATATATTGGAATGCAT ATTTCTCTATCTTGAAAGCTAACCAGTTCTTTTTTAATTGCCCAACAGTCCTCCATCATATCCAGTTAAAGTTCGAGTTA GTTATCAAAAGTTACTGAAGTGTTTTGTGTTGAATGAGCTGCATCATAGGCCTCCAAAGGCTCAAAAAAAGAAGCACTTA TTCAGATCTCTCCAAGCAACAAAGTTTTTCCAGACCACAGAACTTGATTGGGTTGAAGCAGGTCTTCAAGTTTGTAGGCA GGGGTATAACATGTTGAATCTGTTGATCCACAGGAAGAATTTGAACTACCTTCATCTTGATTATAATTTCAATCTTAAGC CTGTGAAAACGTTGACTACTAAGGAGAGAAAGAAGTCACGATTTGGTAATGCTTTTCATCTTTGTCGTGAGATCCTACGT TTGACAAAACTTGTGGTGGATGCCAATGTTCAGTTCCGATTGGGTAATGTTGATGCTTTCCAGTTGGCAGATGGCCTCCA ATATACCTTTTCACATGTTGGTCAATTGACTGGTATGTACCGATATAAGTACAGGCTTATGCGACAAATAAGAATGTGCA AGGACTTGAAACATTTGATTTACTATCGTTTTAACACTGGGCCTGTTGGGAAGGGACCTGGCTGTGGGTTTTGGGCTCCA ATGTGGAGGGTATGGTTATTCTTCCTTCGTGGTATTGTGCCCCTTCTTGAACGATGGCTAGGAAATTTGCTTGCACGTCA ATTTGAAGGGCGCCACTCAAAAGGAGTGGCTAAGACAGTCACCAAGCAACGAGTTGAGAGCCACTTTGATTTAGAGCTTC GAGCAGCTGTTATGCATGATGTTCTTGATGCCATGCCAGGTAATAATTATTAAATTTAACATTATTTATGCTTTCTGTAT TTGGATTTCTTTTCACTGAGTGGCTTCTGCAATTATTTCCTGTGAGATTTACTAAAGTTAAGGTTTTCTCCTTCCTTGAA TGACAGAGGGTATAAAGCAGAACAAGGCAAGAACTATATTGCAGCATTTGAGTGAGGCTTGGCGCTGCTGGAAAGCAAAT ATTCCTTGGAAGGTAAGCTTTTTTATTGTAATTTGTTGACTAAATTGTATTTTAAGTGAAATAGTACAGCTATAAAGTAT GAACACATGGTCAGGTATGGATAATAGCACTTCTATGATGTCTAGATTTTTGTTTATGGTTGTAGTTTTGAGCATTGTGA GGCACAATTAGCAATGGAAAAACGTATTTCCAAAAATACGAACTGATTCATTTATTCTAGCCATTAACAGATACTTGCTC ATTTTTAGTCTTACAGTAAATATTTGGCCTCATTTGAATTTGGTTTATGCATTCCTGGCCTTATGGCTGATTCACTTGTT TTGGCAACGTGTAGGTTCCTGGTCTGCCTGTTCCCATAGAAAACATGATACTTCGATATGTGAAATCAAAAGCGGACTGG TGGACCAATGTTGCTCATTATAATCGTGAGCGTATTAGAAGAGGTGCAACTGTGGATAAAACTGTCTGTCGTAAGAATCT CGGAAGATTGACACGCTTGTGGCTGAAGGCTGAGCAGGTGCATTTAGTGTTCTCTATGACTCATGAGTTTGTGTCTCATT ATTTTTGTAGAATTATTCTTTAGCTTTTCTTATAGATGTCTTGTTTTCATGAAGTTACTTTCTGATCTTCTATCCTTGCT GTAGGAACGTCAACACAATTATTTGAAAGATGGGCCATATGTTACCCCTGAAGAAGCTGTTGCTATATATACAACTACAG TACATTGGTTGGAATCTAGGAAGTTCTCTCCTATTCCATTTCCACCTTTATCATACAAGCATGATACGAAGTTGCTTATC CTTGCACTTGAGAGGTTGAAAGAATCTTACAGTGTTGCTGTGAGGTTGAATCAACTGCAAAGAGAAGAATTGGGGCTGAT TGAGCAAGCTTATGACAATCCACACGAGGCATTATCACGAATCAAGCGGCACCTCCTCACCCAACGTGCCTTCAAAGAAG TATGATATTATATTCAAACTTTTGTAATTTTAGGGTGTTTATTCTCATTCCTATACAAGACAAGTATAATTTTATTTCCT TTTTTGGCAGGTTGGTATAGAGTTTATGGATTTATATAGCTACTTGATTCCGGTTTATGAAATTGAGCCTCTTGAGAAGA TTACCGATGCATATCTTGACCAATATCTTTGGTATGAGGGTGACAAGCGTCATCTCTTTCCTAACTGGATCAAGCCAGCA GATTCGGAGCCACCTCCCCTATTGGTTTACAAATGGTGTCAAGGTATAAACAATTTGCAAGGTATATGGGACACCAGTGA TGGTCAATGCGTTGTTATGTTGCAGACCAAGTTTGAGAAGTTTTTTGAGAAGATTGATTTAACAATGCTTAACAGGTATG TGTTCGAGAATTGCTAAATCACTTTCTGAATGTAATCATGACTATCTTCACCTCTAATTGTGTTTCTATTGTTGCAGGCT TCTGCGTCTGGTTCTAGACCATAATATTGCTGATTATGTCACTGCAAAAAACAATGTTGTGTTGTCATATAAGGATATGA GTCATACAAATTCATATGGACTTATACGAGGTTTACAGTTTGCATCATTTGTTGTTCAATATTATGGACTGGTATTGGAT CTTTTGCTTCTTGGACTGACTCGAGCCAGTGAGATTGCTGGTCCACCGCAGATGCCGAATGAATTCATTACTTACTGGGA CACAAAAGTTGAGACTAGGCATCCAATTAGGCTGTATTCAAGGTACATAGATCGGGTACATATATTATTTCGCTTCACCC ATGAAGAGGCTCGGGACCTCATTCAGCGATATCTCACTGAGCACCCTGATCCTAACAATGAGAACATGGTGGGGTACAAT AATAAGAAGTGCTGGCCAAGAGATGCAAGAATGAGGCTCATGAAACATGATGGTATTTGTTTCTCCTTTTGCCTTGTGTA GGTTTTGCATTTTGACTTTTTATTTGACTCGTTCTTAATGTTTTGTTTGACAATTCACTTCGTTGTAATTTCAGTCAATC TTGGAAGGAGTGTCTTTTGGGATATGAAGAATCGTCTTCCTCGAAGCATTACAACTTTGGAGTGGGAGAACAGCTTTGTT TCTGTTTACAGCAAGGATAATCCAAACTTGCTATTTAGCATGTAAGTAATGATTATTTTAAGCAATTGATCTTTGTGTTC CTCCCCCCCCCCTGCTGTGAAATGTGAAAAAGGTTATGTTTTCAAATTTTTCGCTTTGCATCGAAGTCTTTCAGAATTTT AGACTGCCTTGGTTGTCTTGCTTGACATATTGATTGAAAATGTAGTTTTTTATCTCTTCAGTTTCCTTCTGTATATATCC ACATCTTCCCCAAAAGTATCCTCTCTACCAAATTGTCATTACTGACTCCCAAGTTGTTTTCCTTTTTGTGGAATCTTCCT TTAGTGTGTGTATAACGATGAATTAAGCTCTCTTTGCTGACATCTTTCAATGGCCTACAGGTGTGGGTTTGAAGTGAGGA TACTTCCGAAAATTCGTATGACTCAAGAAGCATTCAGTAACACAAGAGATGGAGTCTGGAATCTCCAGAATGAACAAACT AAAGAAAGGACAGCTGTCGCTTTCTTAAGAGTTGATGATGAACATATGAAAGTGTTTGAGAACCGTGTGAGGCAGATTCT TATGTCTTCGGGGTCTACTACGTTCACAAAAATTGTCAACAAGTGGAATACAGCTTTAATAGGTATGTGAAGTTGCATTG TATGAACATTTGCAGAGGTTATCATTAGTTTTCTCATTGAACTTTGTTATTTGTTTTTATTAGGACTCATGACTTACTTC AGAGAGGCAACTGTACATACTCAAGAACTGTTGGATTTGCTTGTTAAATGTGAGAATAAGATTCAGACCCGTATTAAGAT TGGGCTCAACTCAAAGATGCCTAGCAGGTAAATGATCAGATACTTTTTACTACTTCGTTTGAAGCTTTGAAATTTTAATT GAATATATCCATGCTACTGTCTCTTTTATCAGGTTTCCACCTGTCATTTTCTACACCCCGAAAGAAATTGGAGGGCTCGG AATGTTGTCTATGGGTCACATCTTGATTCCACAAAGTGATCTCCGATACAGTCAGCAGACTGATGTTGGTGTAACCCACT TCAGGAGTGGGATGAGCCATGAGGAGGATCAGCTGATTCCCAACCTTTATCGATACATCCAGGTGAACCTCAATTCTCTC CCCATTATATGTAATAGATGACATTTCCTATTAAAAATGTAATAGTTGACATGCATTTGTGCTCAAATATGATGTCTGTT GATTCATATAGACTCCTGTGTAGATTCATATATATATATATTCATATGTAGTTCATCTTATTTTTATTATTATTCATGCA GCCTTGGGAGAGTGAGTTCATTGATTCACAGCGTGTCTGGGCTGAATATGCATTGAAAAGGCAGGAAGCATCAGCGCAAA ACAGGCGTTTGACCCTTGAAGATCTGGAAGTGAGTGTTCTGAGATCCCTCTTAATGATCTGGACATTAGGATTTCGGTGT TCATGTGAATAGTATTGATGGCAATGTGCTTGTTTTTCCTTAGAGGGTAATTTACTTGCTGACTTATTCTTGATTTATTT TGCAGGACTCGTGGGATAGAGGAATACCACGTATTAACACTTTGTTTCAGAAAGATAGACACACTTTGGCTTATGATAAA GGATGGAGGGTGCGTACAGACTTCAAGCAGTACCAAGTTCTGAAACAAAATCCGTTCTGGTGGACTCACCAAAGGCATGA TGGGAAGTTGTGGAACTTGAACAATTACCGAACTGATGTTATTCAAGCCCTTGGAGGAGTTGAAGGAATTCTTGAACACA CATTATTCAAAGGAACATAGTGAGTCTTATTTTCCTTTGAACTTGCATTGCTGTTTGAGTTGGGGGTGTGCTTTCTCATG CTTAACCATTGTGCCAATTAGAAAAGAATCCTGAGTTTATCCGCTTATTTTTATACATCCTTTTATTAAGAGGAGTATGA TATGGACATAGGAACACACCAAATTTTAGAAATTATAGTACAAAGGCACGTGCACTGACACAAAATAAAAAACATTCACA TTTCATGAGTCATAATGTCATCTATGAGCTTTATTATTTACAATATCCTAAAAAATGAAATTGGCACGTGATAGAAGCAC ATCTGTCTTAATTTAATCATTTGGTTCAGTATTTAGCTCTTGCTATTTGCGTCTATTTTATAGAAGTTGTGATTGACCCA CTGTTGTTTTTCACTGTTAGTTTTCCAACTTGGGAAGGTCTCTTCTGGGAAAAGGCATCAGGCTTTGAGGAATCTATGAA GTATAAGAAGCTCACCAATGCTCAGAGATCTGGTCTCAACCAGATACCCAACCGTAGATTTACACTTTGGTGGTCACCTA CTATTAATCGAGCCAATGTTTATGTGGGTTTCCAAGTGCAGCTAGATCTTACTGGTATTTTCATGCATGGGAAAATACCA ACTTTGAAGATATCTCTTATTCAGATATTCAGAGCTCACTTGTGGCAGAAGATCCATGAGAGTGTTGTCATGGATCTTTG TCAGGTTTTGGATCAAGAGTTGGATGCTCTGGAGATTGAAACTGTTCAGAAGGAAACAATTCATCCTAGGAAAAGTTACA AAATGAACAGTTCTTGTGCAGACATTCTTCTCTTTGCTGCGCATAGATGGCCAATGTCAAAGCCTAGTCTTGTCGCTGAA TCTAAGGATGTTTTTGATCAGAAGGCAAGCAATAAGTACTGGATTGATGTTCAGCTTCGATGGGGTGATTATGACTCTCA TGATATTGAGCGTTACACTCGAGCCAAATTTATGGACTACACAACAGATAATATGTCAATATATCCGTCTCCTACTGGTG CGTGTCTATCATTTTCCTTTGCTCCTTCACATGTTTTAATATTTATTGTTCACTTGATTGTTTTTTCCATGCAGGGGTGA TGATTGGTCTCGACTTGGCGTACAACTTACATTCTGCTTTTGGGAACTGGTTCCCTGGGTCAAAGCCACTGCTTCAGCAA GCCATGAATAAGATCATGAAGGTAAACAAACATCATATATCTGAAGTCTTACAAATTATGAATCATTTGGGGTACATGGA ATTCTTTTATTTGGGGATAAATATTGTTCCTCTGACTGGTTTCAACTTTCAACCTATACTTACACATCTTATTTACACCA TCTCCACTTAGCTCTTGTGGCTGAAGTGTTTGTTTCATTGATTATCTAACACAGTTCTTTTACTTATGATGTTGTGTATA TGCAGTCAAATCCTGCGTTGTATGTTTTGAGGGAACGTATAAGGAAAGGTTTGCAGCTGTACTCTTCTGAGCCGACTGAA CCATATTTGTCTTCCCAAAACTATGGAGAGATATTCAGCAACCAAATTATTTGGTTTGTTGATGACACTAATGTGTATCG TGTTACAATTCACAAGACTTTTGAAGGAAATCTTACAACAAAACCCATCAATGGTGCCATATTTATTTTCAACCCAAGGA CTGGACAGTTGTTTCTTAAGGTTTGTGTTCATGCTCTTGTTCTTATTGTGATGTTTCTAGTGTTAGTTATCTGGCTGTTG ATCAATATCATACTTTGTAGGTTATTCATACAAGTGTCTGGGCTGGTCAGAAGCGTCTTGGCCAGTTGGCCAAGTGGAAA ACAGCTGAAGAAGTTGCTGCTCTAGTAAGGTCTTTGCCTGTAGAAGAACAGCCAAAGCAGATTATTGTCACTCGTAAAGG CATGTTGGATCCATTGGAGGTTCACTTGCTGGATTTCCCCAACATTGTTATCAAAGGAAGTGAGCTGCAGCTTCCTTTCC AGGCATGTTTGAAAATTGAGAAATTTGGGGATCTTATTTTGAAGGCCACGGAGCCACAAATGGTCTTGTTCAACATTTAT GATGACTGGCTGAAGAGTATTTCATCATACACTGCATTCTCTAGACTGATTCTGATTCTCCGAGCTCTTCATGTAAATAA TGAAAAGGCAAAGATGTTACTGAAGCCTGACAAAACTATCATCACCGAGCCTCATCACATCTGGCCTTCTCTAAGTGATG ACCAGTGGATGAAGGTAAAAGTTTAATGTGCAATTTTTACCTGTCTTTCGTTGGTTAAATGTTTACATTTTTTAACAGTG TGCTACACCGTCAAGATTGACTTTTATTTGTTTGTTGAGTTATATTTTGTTCTCATGTAACCTAAACATGATGCATTGTG ACAGGTGGAGGTTGCATTAAGAGATCTTATACTTTCAGATTATGCCAAGAAAAACAATGTGAACACTTCAGCTCTGACTC AGTCTGAGATTCGTGATATTATTCTTGGAGCTGAAATTACTCCACCTTCACAACAGCGGCAACAGATTGCAGAGATTGAG CAACAGGTCATTTTTTTTTTCCTTCCTGGACACATTCAACACTTCGCCCTCCAATCTATCCTGCCGTCTCTTGCTTGAGT TATTTACTCATTCTGTTCTGTATTTTCTATTTTGTAGGCTCATGAAGCTAATCAGGCGACAGCTGTAACAACAAAGACCA CAAATGTTCATGGTGAAGAACTTATAGTAACTACCACCAGTCCCTATGAGCAAGCTGCATTTGGTTCTAAGACTGACTGG CGTGTCAGAGCAATATCCGCCACTAATTTATACCTTCGTGTAAACCATATATATGTGAATTCCGAGGATATAAAGGTTTG AACTATTTTTCTTCATTCCTCCCTCGTTTACACTTCTAGAACTTCTGTCATATGCTAATGTTGGATTTTGTGGTGCAGGA AACCGGCTACACCTATATTATGCCAAAGAACATTTTGAAGAAGTTCATTTGCATAGCAGATCTTCGAACACAAATTGCTG GGTACTTGTATGGCATAAGTCCTCCGGACAATCCTCAGGTGAAGGAAATTCGCTGCATTGTGATGACACCACAATATGGG ACTCATCAACAAGTCCATCTCCCATCAGCTCTTCCAGAGCATGATTTCTTGAATGATTTGGAGCCCTTGGGATGGATGCA TACTCAACCAAATGAGCTTCCCCAGTTGTCGCCTCAGGTTTGCTTGCATTAGCTTACTTATATTTTTCTTTTGTTTTTAA TTAATTTCAATTAACACGACATGGTGACGATTTTTTGAAAGTAAAATAAAAAAATTAGATTGTTGTTTTACTTATCAGGG AAATATATTTATGATTCATGGTATACATTGTCTCACTTGAGGAATGATTATTGCAGGATCTCACTTCACATGCTAAGATC CTAGAGAACAATAAGCAATGGGATGGGGAGAAATGTATTATCTTGACTTGTAGCTTTACTCCTGGTTCCTGTTCTTTAAC CGCGTACAAACTCACTCCATCTGGTTATGAATGGGGCCGTATCAACAAGGATACAGGAAGCAATCCTCATGGTTACCTTC CCACTCATTATGAAAAGGTTCAGATGCTCCTCAGTGATCGCTTCCTTGGTTTCTACATGGTACGTTTTCCGACCTCCTCA AGTTATCTATTTTCTTCTTTGAATATGATTGGGTGATGGTTTATATATTTATATTGATGTCTTATGTAAAAATATATTAA AATTGTGCCTTTTAACCTTTTTACTTATTATTGCTACAATCTGTTATTTTTATTTTATTTTTTGCATTGTTTGACTGATG GTTCTGTGGCTAAAATCTGCAGATTCCTGATAATGGTCCATGGAATTACAACTTCATGGGGGTGAGACACGCACCATCGA TGAAGTATGGAGTGAAACTTGGGACACCTAGGGAGTACTACAACGAGGACCATAGACCCACCCATTTCTTAGAGTTCAGC AACATGGAGGAAAAAGGGGAAACAGTTGTTGAGGGTGATCGTGAGGATACATTCTCTTGAGCTACAAATTGTCTTTTAAC TTTTGAAACTTTTCATAGTATGTTGTATCTTGTATGATCTAATCATGGTACTAGTAGGTATCTTGTAGCAACGGTATCAT GGCTCTGTAAATAATAGCCAACAGCATTTCTCATCTTTCCTTACCTCTGCTTCTGCAATCAAGTTGTCTGAGGTTTCGGA TATTCCACTGTGTTGAGTTTTCTGCCAAGCAGAAGCAACTGCCTTAACTAATTGGTTATGAAACAATTTTGCTATGTAGC ACAAGCCATTCCCCATTTTTTTTCATGGGTGTAGAAGTCAACTTGGAATTGAATCCATTATTTGCTTACTTGTATGACCC GGACTGATAGTTCGGGTGATCGTAGGTTGAATAGTTGAATCAGTAAGTTATCATTTTTTTTTTGGAAAGAATATGGACTT CGTGTTTTTTTATTAAGAAGTGTCTCTTGAAGATGCTTTATATTAAAAAATTGAAATAATTATAGTAGTGGTAATCAATG TCGAGTATTATATCACATGCTTAGTTCGATGCATATAAATTAAATAGTTGAATAAGAGTGTATGGTCGAGTCACAAGTGA TGCGATTAGTTAAAATAAAGTTTTTGAGAAGTTAACAAAACAATGAGTAATATTTTAATATGGCCAATGCATTCTGACTG CGTAAGACAGGATTGGAG
CDS sequence (LotjaGi3g1v0008200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGAACAACGGCCAGATTGCGCCACCGGGGACTTCTGTCCCTTCTATTCCTCCGCCTCAGGCGGCGCAACCGTCGTA CACCGTGCTTCCACCTCCGCCCCCGGCCCCTGTGGAGACTGAGGCCGATGCGGAGGCTAGGCTTGAAGAGAAGGCGAGGA AGTGGCAGCAGTTGAACTCGAAGCGTTATAGTGATAAGAGGAAGTTCGGGTTCGTTGAGACTCAGAAAGAGGACATGCCC CCTGAACATGTCAGGAAAATTATCAGGGATCATGGGGATATGTCCTCGAAGAAATTTCGTCATGATAAACGTGTTTATCT CGGGGCACTTAAATTCATACCACATGCAGTTTACAAGCTCCTGGAAAATATGCCCATGCCGTGGGAGCAGGTCCGAGATA TCAAGGTTTTGTACCATATTTCTGGGGCTATCACATTTGTCAATGAAATACCTTGGGTTGTGGAGCCTATTTATCTGGCT CAGTGGGGTACAATGTGGATCATGATGAGAAGGGAGAAAAGGGATCGTCGTCACTTTAAGAGGATGCGATTTCCCCCATT TGATGACGAGGAGCCTCCTCTTGACTATGCTGATAATCTTTTGGATGTTGATCCTCTAGAGCCAATTCAACTGGAGCTCG ATGAAGAAGAAGATTCTGCTGTATATACTTGGTTTTATGATCACAAGCCTCTTGTTAAAACAAAGCTCATAAATGGTCCT AGTTACCGGAAATGGCATCTTTCTCTTCCTATAATGGCTACTTTGCATCGGCTCGCTGGGCAGCTTCTGTCTGATTTGAT CGACCGCAATTACTTTTACTTGTTTGACATGGAGTCTTTTTTTACGGCAAAGGCTTTGAACATGTGCATACCTGGTGGCC CTAAGTTTGAGCCTCTCTACCGTGACATGGAGAAGGGAGATGAGGACTGGAATGAGTTTAATGACATCAATAAGCTCATT ATAAGGTCCCCACTTCGGACAGAGTACAGAATTGCTTTCCCTCATCTTTATAACAACAGGCCTCGCAAAGTAAAGCTTTG TATCTACCATACTCCCATGATCATGTACATAAAAACTGAAGATCCTGATCTACCTGCATTCTATTATGATCCCTTGATAC ACCCAATAACCAGTGCTAACAAGGATCGACGGGAGAAGAGAATCCATGATGAGGATGATGATGATGATTGGATATTGCCA GATGGTGTGGAACCTTTACTTAAAGATACACAGCTATATACAGACACCACAGCTGCTGGAATATCCTTGCTGTTTGCTCC TCGTCCTTTTAATATGAGATCTGGTCGGATGAGGCGGGCTGAAGATATTCCTCTTGTGTCAGAATGGTATAAGGAGCATT GTCCTCCATCATATCCAGTTAAAGTTCGAGTTAGTTATCAAAAGTTACTGAAGTGTTTTGTGTTGAATGAGCTGCATCAT AGGCCTCCAAAGGCTCAAAAAAAGAAGCACTTATTCAGATCTCTCCAAGCAACAAAGTTTTTCCAGACCACAGAACTTGA TTGGGTTGAAGCAGGTCTTCAAGTTTGTAGGCAGGGGTATAACATGTTGAATCTGTTGATCCACAGGAAGAATTTGAACT ACCTTCATCTTGATTATAATTTCAATCTTAAGCCTGTGAAAACGTTGACTACTAAGGAGAGAAAGAAGTCACGATTTGGT AATGCTTTTCATCTTTGTCGTGAGATCCTACGTTTGACAAAACTTGTGGTGGATGCCAATGTTCAGTTCCGATTGGGTAA TGTTGATGCTTTCCAGTTGGCAGATGGCCTCCAATATACCTTTTCACATGTTGGTCAATTGACTGGTATGTACCGATATA AGTACAGGCTTATGCGACAAATAAGAATGTGCAAGGACTTGAAACATTTGATTTACTATCGTTTTAACACTGGGCCTGTT GGGAAGGGACCTGGCTGTGGGTTTTGGGCTCCAATGTGGAGGGTATGGTTATTCTTCCTTCGTGGTATTGTGCCCCTTCT TGAACGATGGCTAGGAAATTTGCTTGCACGTCAATTTGAAGGGCGCCACTCAAAAGGAGTGGCTAAGACAGTCACCAAGC AACGAGTTGAGAGCCACTTTGATTTAGAGCTTCGAGCAGCTGTTATGCATGATGTTCTTGATGCCATGCCAGAGGGTATA AAGCAGAACAAGGCAAGAACTATATTGCAGCATTTGAGTGAGGCTTGGCGCTGCTGGAAAGCAAATATTCCTTGGAAGGT TCCTGGTCTGCCTGTTCCCATAGAAAACATGATACTTCGATATGTGAAATCAAAAGCGGACTGGTGGACCAATGTTGCTC ATTATAATCGTGAGCGTATTAGAAGAGGTGCAACTGTGGATAAAACTGTCTGTCGTAAGAATCTCGGAAGATTGACACGC TTGTGGCTGAAGGCTGAGCAGGAACGTCAACACAATTATTTGAAAGATGGGCCATATGTTACCCCTGAAGAAGCTGTTGC TATATATACAACTACAGTACATTGGTTGGAATCTAGGAAGTTCTCTCCTATTCCATTTCCACCTTTATCATACAAGCATG ATACGAAGTTGCTTATCCTTGCACTTGAGAGGTTGAAAGAATCTTACAGTGTTGCTGTGAGGTTGAATCAACTGCAAAGA GAAGAATTGGGGCTGATTGAGCAAGCTTATGACAATCCACACGAGGCATTATCACGAATCAAGCGGCACCTCCTCACCCA ACGTGCCTTCAAAGAAGTTGGTATAGAGTTTATGGATTTATATAGCTACTTGATTCCGGTTTATGAAATTGAGCCTCTTG AGAAGATTACCGATGCATATCTTGACCAATATCTTTGGTATGAGGGTGACAAGCGTCATCTCTTTCCTAACTGGATCAAG CCAGCAGATTCGGAGCCACCTCCCCTATTGGTTTACAAATGGTGTCAAGGTATAAACAATTTGCAAGGTATATGGGACAC CAGTGATGGTCAATGCGTTGTTATGTTGCAGACCAAGTTTGAGAAGTTTTTTGAGAAGATTGATTTAACAATGCTTAACA GGCTTCTGCGTCTGGTTCTAGACCATAATATTGCTGATTATGTCACTGCAAAAAACAATGTTGTGTTGTCATATAAGGAT ATGAGTCATACAAATTCATATGGACTTATACGAGGTTTACAGTTTGCATCATTTGTTGTTCAATATTATGGACTGGTATT GGATCTTTTGCTTCTTGGACTGACTCGAGCCAGTGAGATTGCTGGTCCACCGCAGATGCCGAATGAATTCATTACTTACT GGGACACAAAAGTTGAGACTAGGCATCCAATTAGGCTGTATTCAAGGTACATAGATCGGGTACATATATTATTTCGCTTC ACCCATGAAGAGGCTCGGGACCTCATTCAGCGATATCTCACTGAGCACCCTGATCCTAACAATGAGAACATGGTGGGGTA CAATAATAAGAAGTGCTGGCCAAGAGATGCAAGAATGAGGCTCATGAAACATGATGTCAATCTTGGAAGGAGTGTCTTTT GGGATATGAAGAATCGTCTTCCTCGAAGCATTACAACTTTGGAGTGGGAGAACAGCTTTGTTTCTGTTTACAGCAAGGAT AATCCAAACTTGCTATTTAGCATGTGTGGGTTTGAAGTGAGGATACTTCCGAAAATTCGTATGACTCAAGAAGCATTCAG TAACACAAGAGATGGAGTCTGGAATCTCCAGAATGAACAAACTAAAGAAAGGACAGCTGTCGCTTTCTTAAGAGTTGATG ATGAACATATGAAAGTGTTTGAGAACCGTGTGAGGCAGATTCTTATGTCTTCGGGGTCTACTACGTTCACAAAAATTGTC AACAAGTGGAATACAGCTTTAATAGGACTCATGACTTACTTCAGAGAGGCAACTGTACATACTCAAGAACTGTTGGATTT GCTTGTTAAATGTGAGAATAAGATTCAGACCCGTATTAAGATTGGGCTCAACTCAAAGATGCCTAGCAGGTTTCCACCTG TCATTTTCTACACCCCGAAAGAAATTGGAGGGCTCGGAATGTTGTCTATGGGTCACATCTTGATTCCACAAAGTGATCTC CGATACAGTCAGCAGACTGATGTTGGTGTAACCCACTTCAGGAGTGGGATGAGCCATGAGGAGGATCAGCTGATTCCCAA CCTTTATCGATACATCCAGCCTTGGGAGAGTGAGTTCATTGATTCACAGCGTGTCTGGGCTGAATATGCATTGAAAAGGC AGGAAGCATCAGCGCAAAACAGGCGTTTGACCCTTGAAGATCTGGAAGACTCGTGGGATAGAGGAATACCACGTATTAAC ACTTTGTTTCAGAAAGATAGACACACTTTGGCTTATGATAAAGGATGGAGGGTGCGTACAGACTTCAAGCAGTACCAAGT TCTGAAACAAAATCCGTTCTGGTGGACTCACCAAAGGCATGATGGGAAGTTGTGGAACTTGAACAATTACCGAACTGATG TTATTCAAGCCCTTGGAGGAGTTGAAGGAATTCTTGAACACACATTATTCAAAGGAACATATTTTCCAACTTGGGAAGGT CTCTTCTGGGAAAAGGCATCAGGCTTTGAGGAATCTATGAAGTATAAGAAGCTCACCAATGCTCAGAGATCTGGTCTCAA CCAGATACCCAACCGTAGATTTACACTTTGGTGGTCACCTACTATTAATCGAGCCAATGTTTATGTGGGTTTCCAAGTGC AGCTAGATCTTACTGGTATTTTCATGCATGGGAAAATACCAACTTTGAAGATATCTCTTATTCAGATATTCAGAGCTCAC TTGTGGCAGAAGATCCATGAGAGTGTTGTCATGGATCTTTGTCAGGTTTTGGATCAAGAGTTGGATGCTCTGGAGATTGA AACTGTTCAGAAGGAAACAATTCATCCTAGGAAAAGTTACAAAATGAACAGTTCTTGTGCAGACATTCTTCTCTTTGCTG CGCATAGATGGCCAATGTCAAAGCCTAGTCTTGTCGCTGAATCTAAGGATGTTTTTGATCAGAAGGCAAGCAATAAGTAC TGGATTGATGTTCAGCTTCGATGGGGTGATTATGACTCTCATGATATTGAGCGTTACACTCGAGCCAAATTTATGGACTA CACAACAGATAATATGTCAATATATCCGTCTCCTACTGGGGTGATGATTGGTCTCGACTTGGCGTACAACTTACATTCTG CTTTTGGGAACTGGTTCCCTGGGTCAAAGCCACTGCTTCAGCAAGCCATGAATAAGATCATGAAGTCAAATCCTGCGTTG TATGTTTTGAGGGAACGTATAAGGAAAGGTTTGCAGCTGTACTCTTCTGAGCCGACTGAACCATATTTGTCTTCCCAAAA CTATGGAGAGATATTCAGCAACCAAATTATTTGGTTTGTTGATGACACTAATGTGTATCGTGTTACAATTCACAAGACTT TTGAAGGAAATCTTACAACAAAACCCATCAATGGTGCCATATTTATTTTCAACCCAAGGACTGGACAGTTGTTTCTTAAG GTTATTCATACAAGTGTCTGGGCTGGTCAGAAGCGTCTTGGCCAGTTGGCCAAGTGGAAAACAGCTGAAGAAGTTGCTGC TCTAGTAAGGTCTTTGCCTGTAGAAGAACAGCCAAAGCAGATTATTGTCACTCGTAAAGGCATGTTGGATCCATTGGAGG TTCACTTGCTGGATTTCCCCAACATTGTTATCAAAGGAAGTGAGCTGCAGCTTCCTTTCCAGGCATGTTTGAAAATTGAG AAATTTGGGGATCTTATTTTGAAGGCCACGGAGCCACAAATGGTCTTGTTCAACATTTATGATGACTGGCTGAAGAGTAT TTCATCATACACTGCATTCTCTAGACTGATTCTGATTCTCCGAGCTCTTCATGTAAATAATGAAAAGGCAAAGATGTTAC TGAAGCCTGACAAAACTATCATCACCGAGCCTCATCACATCTGGCCTTCTCTAAGTGATGACCAGTGGATGAAGGTGGAG GTTGCATTAAGAGATCTTATACTTTCAGATTATGCCAAGAAAAACAATGTGAACACTTCAGCTCTGACTCAGTCTGAGAT TCGTGATATTATTCTTGGAGCTGAAATTACTCCACCTTCACAACAGCGGCAACAGATTGCAGAGATTGAGCAACAGGCTC ATGAAGCTAATCAGGCGACAGCTGTAACAACAAAGACCACAAATGTTCATGGTGAAGAACTTATAGTAACTACCACCAGT CCCTATGAGCAAGCTGCATTTGGTTCTAAGACTGACTGGCGTGTCAGAGCAATATCCGCCACTAATTTATACCTTCGTGT AAACCATATATATGTGAATTCCGAGGATATAAAGGAAACCGGCTACACCTATATTATGCCAAAGAACATTTTGAAGAAGT TCATTTGCATAGCAGATCTTCGAACACAAATTGCTGGGTACTTGTATGGCATAAGTCCTCCGGACAATCCTCAGGTGAAG GAAATTCGCTGCATTGTGATGACACCACAATATGGGACTCATCAACAAGTCCATCTCCCATCAGCTCTTCCAGAGCATGA TTTCTTGAATGATTTGGAGCCCTTGGGATGGATGCATACTCAACCAAATGAGCTTCCCCAGTTGTCGCCTCAGGATCTCA CTTCACATGCTAAGATCCTAGAGAACAATAAGCAATGGGATGGGGAGAAATGTATTATCTTGACTTGTAGCTTTACTCCT GGTTCCTGTTCTTTAACCGCGTACAAACTCACTCCATCTGGTTATGAATGGGGCCGTATCAACAAGGATACAGGAAGCAA TCCTCATGGTTACCTTCCCACTCATTATGAAAAGGTTCAGATGCTCCTCAGTGATCGCTTCCTTGGTTTCTACATGATTC CTGATAATGGTCCATGGAATTACAACTTCATGGGGGTGAGACACGCACCATCGATGAAGTATGGAGTGAAACTTGGGACA CCTAGGGAGTACTACAACGAGGACCATAGACCCACCCATTTCTTAGAGTTCAGCAACATGGAGGAAAAAGGGGAAACAGT TGTTGAGGGTGATCGTGAGGATACATTCTCTTGA
Protein sequence (LotjaGi3g1v0008200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWNNGQIAPPGTSVPSIPPPQAAQPSYTVLPPPPPAPVETEADAEARLEEKARKWQQLNSKRYSDKRKFGFVETQKEDMP PEHVRKIIRDHGDMSSKKFRHDKRVYLGALKFIPHAVYKLLENMPMPWEQVRDIKVLYHISGAITFVNEIPWVVEPIYLA QWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVYTWFYDHKPLVKTKLINGP SYRKWHLSLPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLI IRSPLRTEYRIAFPHLYNNRPRKVKLCIYHTPMIMYIKTEDPDLPAFYYDPLIHPITSANKDRREKRIHDEDDDDDWILP DGVEPLLKDTQLYTDTTAAGISLLFAPRPFNMRSGRMRRAEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKCFVLNELHH RPPKAQKKKHLFRSLQATKFFQTTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFG NAFHLCREILRLTKLVVDANVQFRLGNVDAFQLADGLQYTFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPV GKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGI KQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTR LWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQR EELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIK PADSEPPPLLVYKWCQGINNLQGIWDTSDGQCVVMLQTKFEKFFEKIDLTMLNRLLRLVLDHNIADYVTAKNNVVLSYKD MSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPQMPNEFITYWDTKVETRHPIRLYSRYIDRVHILFRF THEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKD NPNLLFSMCGFEVRILPKIRMTQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIV NKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDL RYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEASAQNRRLTLEDLEDSWDRGIPRIN TLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEG LFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAH LWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKY WIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLQQAMNKIMKSNPAL YVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLK VIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIE KFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIITEPHHIWPSLSDDQWMKVE VALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEQQAHEANQATAVTTKTTNVHGEELIVTTTS PYEQAAFGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQIAGYLYGISPPDNPQVK EIRCIVMTPQYGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTSHAKILENNKQWDGEKCIILTCSFTP GSCSLTAYKLTPSGYEWGRINKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMIPDNGPWNYNFMGVRHAPSMKYGVKLGT PREYYNEDHRPTHFLEFSNMEEKGETVVEGDREDTFS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 48 | 48 | - | – | |
| MobiDBLite | 12 | 39 | 28 | - | – | |
| PANTHER | 32 | 2357 | 2326 | 0.0 | ||
| PANTHER | 32 | 2357 | 2326 | 0.0 | – | |
| Pfam | 76 | 227 | 152 | 1.0E-85 | ||
| Pfam | 415 | 820 | 406 | 1.3E-236 | ||
| Pfam | 1005 | 1095 | 91 | 8.8E-47 | ||
| SUPERFAMILY | 1016 | 1273 | 258 | 5.69E-91 | ||
| Gene3D | 1203 | 1323 | 121 | 2.1E-62 | ||
| Pfam | 1230 | 1363 | 134 | 7.5E-73 | ||
| Coils | 1411 | 1431 | 21 | - | – | |
| Pfam | 1462 | 1620 | 159 | 1.1E-89 | ||
| Gene3D | 1601 | 1772 | 172 | 5.1E-95 | – | |
| Pfam | 1780 | 2009 | 230 | 1.1E-129 | ||
| Gene3D | 1781 | 1941 | 161 | 1.8E-94 | ||
| SUPERFAMILY | 1783 | 2035 | 253 | 1.37E-123 | ||
| CDD | 1786 | 2036 | 251 | 0.0 | ||
| Gene3D | 1942 | 2040 | 99 | 1.4E-49 | ||
| Gene3D | 2078 | 2357 | 280 | 1.1E-138 | – | |
| CDD | 2087 | 2337 | 251 | 9.29535E-169 | – | |
| SMART | 2119 | 2253 | 135 | 1.4E-24 | ||
| Pfam | 2121 | 2219 | 99 | 6.6E-7 | ||
| ProSiteProfiles | 2123 | 2254 | 132 | 19.976 | ||
| Pfam | 2232 | 2354 | 123 | 1.0E-50 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | MRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Spliceosomal complex | Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA. | ||
| Molecular function | U6 snRNA binding | Interacting selectively and non-covalently with the U6 small nuclear RNA (U6 snRNA). | ||
| Molecular function | U5 snRNA binding | Interacting selectively and non-covalently with the U5 small nuclear RNA (U5 snRNA). |
Expression pattern of LotjaGi3g1v0008200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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