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SM00232

Source: SMART

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Associated Lotus transcripts 37

Transcript Name Description Predicted domains Domain count
Lj0g3v0265709.1
– 26S proteasome non-ATPase regulatory subunit [Medicago truncatula] gi|357447037|ref|XP_003593794.1|
Domains
10
Lj0g3v0268859.2
– PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 7-like [Cicer arietinum] gi|502137923|ref|XP_004503231.1|
Domains
9
Lj0g3v0320179.1
– PREDICTED: COP9 signalosome complex subunit 6a-like [Cicer arietinum] gi|502127367|ref|XP_004499677.1|
Domains
9
Lj1g3v1966230.1
– PREDICTED: COP9 signalosome complex subunit 5a-like [Cicer arietinum] gi|502132165|ref|XP_004501247.1|
Domains
8
Lj1g3v3170080.1
– PREDICTED: eukaryotic translation initiation factor 3 subunit H-like [Glycine max] gi|356568923|ref|XP_003552657.1|
Domains
9
Lj2g3v1404830.1
– PREDICTED: AMSH-like ubiquitin thiolesterase 2-like [Glycine max] gi|356497755|ref|XP_003517724.1|
Domains
9
Lj2g3v1404830.2
– STAM-binding protein [Medicago truncatula] gi|357485879|ref|XP_003613227.1|
Domains
8
Lj2g3v2702320.1
– PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 7-like [Glycine max] gi|356539941|ref|XP_003538451.1|
Domains
9
Lj2g3v2703350.1
– PREDICTED: eukaryotic translation initiation factor 3 subunit F-like isoform X1 [Cicer arietinum] gi|502137929|ref|XP_004503233.1|
Domains
9
Lj3g3v0044310.3
– PREDICTED: pre-mRNA-processing-splicing factor 8-like [Cicer arietinum] gi|502080722|ref|XP_004486659.1|
Domains
21
Lj3g3v0075800.1
– Lys-63-specific deubiquitinase BRCC36 [Medicago truncatula] gi|357455111|ref|XP_003597836.1|
Domains
11
Lj4g3v2282930.1
– PREDICTED: AMSH-like ubiquitin thiolesterase 3-like [Glycine max] gi|356564628|ref|XP_003550553.1|
Domains
9
Lj5g3v0001030.1
– PREDICTED: 26S proteasome non-ATPase regulatory subunit 14-like [Glycine max] gi|356552194|ref|XP_003544454.1|
Domains
10
Lj6g3v1966950.1
– 26S proteasome non-ATPase regulatory subunit [Medicago truncatula] gi|357447037|ref|XP_003593794.1|
Domains
10
LotjaGi1g1v0080300.1
– Eukaryotic translation initiation factor 3 subunit F; TAIR: AT5G05780.1 RP non-ATPase subunit 8A; Swiss-Prot: sp|O24412|PSD7A_ARATH 26S proteasome non-ATPase regulatory subunit 7 homolog A; TrEMBL-Plants: tr|V7CZG2|V7CZG2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0080300
Domains
15
LotjaGi1g1v0080300.2
– Eukaryotic translation initiation factor 3 subunit F; TAIR: AT5G05780.2 RP non-ATPase subunit 8A; Swiss-Prot: sp|O24412|PSD7A_ARATH 26S proteasome non-ATPase regulatory subunit 7 homolog A; TrEMBL-Plants: tr|I1LMP2|I1LMP2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0080300
Domains
15
LotjaGi1g1v0080300.3
– Eukaryotic translation initiation factor 3 subunit F; TAIR: AT5G05780.1 RP non-ATPase subunit 8A; Swiss-Prot: sp|O24412|PSD7A_ARATH 26S proteasome non-ATPase regulatory subunit 7 homolog A; TrEMBL-Plants: tr|I1LMP2|I1LMP2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0080300
Domains
15
LotjaGi1g1v0393500.1
– COP9 signalosome complex subunit 5; TAIR: AT1G71230.1 COP9-signalosome 5B; Swiss-Prot: sp|Q9FVU9|CSN5A_ARATH COP9 signalosome complex subunit 5a; TrEMBL-Plants: tr|G7JCC9|G7JCC9_MEDTR COP9 signalosome complex subunit 5; Found in the gene: LotjaGi1g1v0393500
Domains
13
LotjaGi1g1v0393500.2
– COP9 signalosome complex subunit 5; TAIR: AT1G71230.1 COP9-signalosome 5B; Swiss-Prot: sp|Q9FVU9|CSN5A_ARATH COP9 signalosome complex subunit 5a; TrEMBL-Plants: tr|G7JCC9|G7JCC9_MEDTR COP9 signalosome complex subunit 5; Found in the gene: LotjaGi1g1v0393500
Domains
13
LotjaGi1g1v0530600.1
– Eukaryotic translation initiation factor 3 subunit H; TAIR: AT1G10840.1 translation initiation factor 3 subunit H1; Swiss-Prot: sp|Q9C5Z2|EIF3H_ARATH Eukaryotic translation initiation factor 3 subunit H; TrEMBL-Plants: tr|I3SB83|I3SB83_LOTJA Eukaryotic translation initiation factor 3 subunit H; Found in the gene: LotjaGi1g1v0530600
Domains
12
LotjaGi1g1v0530600.2
– Eukaryotic translation initiation factor 3 subunit H; TAIR: AT1G10840.1 translation initiation factor 3 subunit H1; Swiss-Prot: sp|Q9C5Z2|EIF3H_ARATH Eukaryotic translation initiation factor 3 subunit H; TrEMBL-Plants: tr|I3SB83|I3SB83_LOTJA Eukaryotic translation initiation factor 3 subunit H; Found in the gene: LotjaGi1g1v0530600
Domains
12
LotjaGi2g1v0205500.1
– AMSH-like ubiquitin thioesterase 1; TAIR: AT1G48790.1 associated molecule with the SH3 domain of STAM 1; Swiss-Prot: sp|Q8VYB5|AMSH1_ARATH AMSH-like ubiquitin thioesterase 1; TrEMBL-Plants: tr|A0A0H4LWA1|A0A0H4LWA1_LOTJA Associated molecule with the SH3 domain of STAM 1; Found in the gene: LotjaGi2g1v0205500
Domains
17
LotjaGi2g1v0205500.2
– AMSH-like ubiquitin thioesterase 1; TAIR: AT1G48790.1 associated molecule with the SH3 domain of STAM 1; Swiss-Prot: sp|Q8VYB5|AMSH1_ARATH AMSH-like ubiquitin thioesterase 1; TrEMBL-Plants: tr|A0A0H4LWA1|A0A0H4LWA1_LOTJA Associated molecule with the SH3 domain of STAM 1; Found in the gene: LotjaGi2g1v0205500
Domains
15
LotjaGi2g1v0320500.1
– AMSH-like ubiquitin thioesterase 1; TAIR: AT1G10600.1 associated molecule with the SH3 domain of STAM 2; Swiss-Prot: sp|Q6NKP9|AMSH2_ARATH AMSH-like ubiquitin thioesterase 2; TrEMBL-Plants: tr|A0A151TGJ4|A0A151TGJ4_CAJCA ESCRT I complex subunit sst2; Found in the gene: LotjaGi2g1v0320500
Domains
11
LotjaGi2g1v0320500.2
– AMSH-like ubiquitin thioesterase 1; TAIR: AT1G10600.1 associated molecule with the SH3 domain of STAM 2; Swiss-Prot: sp|Q6NKP9|AMSH2_ARATH AMSH-like ubiquitin thioesterase 2; TrEMBL-Plants: tr|A0A151TGJ4|A0A151TGJ4_CAJCA ESCRT I complex subunit sst2; Found in the gene: LotjaGi2g1v0320500
Domains
11
LotjaGi3g1v0008200.1
– Pre-mRNA-processing-splicing factor 8; TAIR: AT1G80070.1 Pre-mRNA-processing-splicing factor; Swiss-Prot: sp|Q9SSD2|PRP8A_ARATH Pre-mRNA-processing-splicing factor 8A; TrEMBL-Plants: tr|V7BXW4|V7BXW4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0008200
Domains
36
LotjaGi3g1v0008200.2
– Pre-mRNA-processing-splicing factor 8; TAIR: AT1G80070.1 Pre-mRNA-processing-splicing factor; Swiss-Prot: sp|Q9SSD2|PRP8A_ARATH Pre-mRNA-processing-splicing factor 8A; TrEMBL-Plants: tr|V7BXW4|V7BXW4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0008200
Domains
35
LotjaGi3g1v0008200.3
– Pre-mRNA-processing-splicing factor 8; TAIR: AT1G80070.1 Pre-mRNA-processing-splicing factor; Swiss-Prot: sp|Q9SSD2|PRP8A_ARATH Pre-mRNA-processing-splicing factor 8A; TrEMBL-Plants: tr|V7BXW4|V7BXW4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0008200
Domains
35
LotjaGi3g1v0008200.4
– Pre-mRNA-processing-splicing factor 8; TAIR: AT1G80070.1 Pre-mRNA-processing-splicing factor; Swiss-Prot: sp|Q9SSD2|PRP8A_ARATH Pre-mRNA-processing-splicing factor 8A; TrEMBL-Plants: tr|V7BXW4|V7BXW4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0008200
Domains
35
LotjaGi3g1v0011600.1
– Lys-63-specific deubiquitinase BRCC36; TAIR: AT1G80210.1 Mov34/MPN/PAD-1 family protein; Swiss-Prot: sp|Q4VA72|BRCC3_XENTR Lys-63-specific deubiquitinase BRCC36; TrEMBL-Plants: tr|C6T923|C6T923_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0011600
Domains
15
LotjaGi3g1v0011600.3
– Lys-63-specific deubiquitinase BRCC36; TAIR: AT1G80210.1 Mov34/MPN/PAD-1 family protein; Swiss-Prot: sp|Q4VA72|BRCC3_XENTR Lys-63-specific deubiquitinase BRCC36; TrEMBL-Plants: tr|C6T923|C6T923_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0011600
Domains
15
LotjaGi3g1v0331000.1
– Eukaryotic translation initiation factor 3 subunit F; TAIR: AT5G56280.1 COP9 signalosome subunit 6A; Swiss-Prot: sp|Q8W206|CSN6A_ARATH COP9 signalosome complex subunit 6a; TrEMBL-Plants: tr|I3S7E3|I3S7E3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0331000
Domains
12
LotjaGi4g1v0336100.1
– AMSH-like ubiquitin thioesterase 1; TAIR: AT4G16144.1 associated molecule with the SH3 domain of STAM 3; Swiss-Prot: sp|Q5PNU3|AMSH3_ARATH AMSH-like ubiquitin thioesterase 3; TrEMBL-Plants: tr|A0A151ST25|A0A151ST25_CAJCA ESCRT I complex subunit sst2; Found in the gene: LotjaGi4g1v0336100
Domains
16
LotjaGi5g1v0025800.1
– 26S proteasome regulatory subunit; TAIR: AT5G23540.1 Mov34/MPN/PAD-1 family protein; Swiss-Prot: sp|Q9LT08|PSDE_ARATH 26S proteasome non-ATPase regulatory subunit 14 homolog; TrEMBL-Plants: tr|A0A1J7HGT4|A0A1J7HGT4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0025800
Domains
13
LotjaGi6g1v0070800.1
– Eukaryotic translation initiation factor 3 subunit F; TAIR: AT5G05780.1 RP non-ATPase subunit 8A; Swiss-Prot: sp|O24412|PSD7A_ARATH 26S proteasome non-ATPase regulatory subunit 7 homolog A; TrEMBL-Plants: tr|I3S3L3|I3S3L3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0070800
Domains
15
LotjaGi6g1v0071100.1
– Eukaryotic translation initiation factor 3 subunit F; TAIR: AT2G39990.1 eukaryotic translation initiation factor 2; Swiss-Prot: sp|O04202|EIF3F_ARATH Eukaryotic translation initiation factor 3 subunit F; TrEMBL-Plants: tr|I3SNM9|I3SNM9_LOTJA Eukaryotic translation initiation factor 3 subunit F; Found in the gene: LotjaGi6g1v0071100
Domains
13
LotjaGi6g1v0316900.1
– 26S proteasome regulatory subunit; TAIR: AT5G23540.1 Mov34/MPN/PAD-1 family protein; Swiss-Prot: sp|Q9LT08|PSDE_ARATH 26S proteasome non-ATPase regulatory subunit 14 homolog; TrEMBL-Plants: tr|A0A022R2G9|A0A022R2G9_ERYGU Uncharacterized protein; Found in the gene: LotjaGi6g1v0316900
Domains
13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd08069 CDD 1 2.70