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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0008200 |
| Transcript ID | LotjaGi3g1v0008200.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pre-mRNA-processing-splicing factor 8; TAIR: AT1G80070.1 Pre-mRNA-processing-splicing factor; Swiss-Prot: sp|Q9SSD2|PRP8A_ARATH Pre-mRNA-processing-splicing factor 8A; TrEMBL-Plants: tr|V7BXW4|V7BXW4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0008200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:920435..932012) extracted from Lotus japonicus Gifu genome v1.2.
ATGTGGAACAACGGCCAGATTGCGCCACCGGGGACTTCTGTCCCTTCTATTCCTCCGCCTCAGGCGGCGCAACCGTCGTA CACCGTGCTTCCACCTCCGCCCCCGGCCCCTGTGGAGACTGAGGCCGATGCGGAGGCTAGGCTTGAAGAGAAGGCGAGGA AGTGGCAGCAGTTGAACTCGAAGCGTTATAGTGATAAGAGGAAGTTCGGGTTCGTTGAGACTCAGAAAGAGGACATGCCC CCTGAACATGTCAGGAAAATTATCAGGCAAGTGTTGTTCTCTCTGGATTTCCTTGGCGATTTGTTGCTACTGTTTTGTTC TGAATCTTGAAATTTTCGGTTGTAGCTTTCTAATTTTCATTTGCCTAGGAAATAATAGCTGGTTCTTGAACTTAGTTATG AAGTTGTAGAAGTTATGAAGTCTGATGTTGAAATTACTTGATTGTGCTGGCTGAAGGATGCTTGGATATTACACTTGTTT GGGTTAGCTGACAAGATTTATTTGTTCCGAATCGTGAACTCGGAAAATGATTATTCGAAGCGCTATTCCCCCTTTTTAAT TTTGTAGGTTTTTTTGTGTGAGTGTAAAGCTTTCTAAGTTTGAATGATGCTCATGGTTAGCCAGATAGATAGGTGTAGAG CCTTCACTGTTTTATATTAAGTTAGTTGATGCTGGGCATGTAGCATAGGATGGTTTTTTTTTAAGATTTTGATTTGGGTT GTTTTCTATCTTGTATGATACATTACTTACTAATATGGTTTTTCAAGTAGTAATTTTCCTCTTGCTGTTCTTCATTTCAG GGATCATGGGGATATGTCCTCGAAGAAATTTCGTCATGATAAACGTGTTTATCTCGGGGCACTTAAATTCATACCACATG CAGTTTACAAGCTCCTGGAAAATATGCCCATGCCGTGGGAGCAGGTTCTCTGCATTTTTCCAGTTCTTGTTATTTCTTCA ATTTTAGCAGTGCATGTTTTCTTCCACTTATTTGATTCTCTGTGTTGTCCCATGCTAATACCATCATGAATCTGCTTTTG TGAATGTAGGTCCGAGATATCAAGGTTTTGTACCATATTTCTGGGGCTATCACATTTGTCAATGAAATACCTTGGGTTGT GGAGCCTATTTATCTGGCTCAGGTTTGTTGTTCTCTTTTCCCTATAAAACCTGCTATACTGTGTATGATCCTTATACATC CTTTCTTACCTTAATGATTCTCAATTGATAAACTATTGTCTGTTATGCAGTGGGGTACAATGTGGATCATGATGAGAAGG GAGAAAAGGGATCGTCGTCACTTTAAGAGGATGCGATTTCCCCCATTTGATGACGAGGAGCCTCCTCTTGACTATGCTGA TAATCTTTTGGATGTTGATCCTCTAGAGCCAATTCAACTGGAGCTCGATGAAGAAGAAGATTCTGCTGTATATACTTGGT TTTATGATCACAAGCCTCTTGTTAAAACAAAGCTCATAAATGGTCCTAGTTACCGGAAATGGCATCTTTCTCTTCCTATA ATGGCTACTTTGCATCGGCTCGCTGGGCAGCTTCTGTCTGATTTGATCGACCGCAATTACTTTTACTTGTTTGACATGGA GTCTTTTTTTACGGCAAAGGCTTTGAACATGTGCATACCTGGTACTTGGATTTCTTTCTTTCTATTTTTTTATGCTAAAC AAACATTTGAACCTTTCTTGTTATTTATTGGGTTAGGTTTTGATCAAGTTTAAGATCACATCAAGCTAGATATTGGTAAT TATAAAACTACTAGGTAACTATGCTGATCATTAAGCATACTGAACTTTTGTTGGTTGACCTATCTGTTTCAACTTTCCTT TATGTTCATGTCCCTTGAGTTTTAGGAATTGATTTAAAATTTAATTTAAGCATGATTTTCTCAACTGTGTATGTAAAATA CTGTACAAATCATCTAAAAAAATACACAGAAATATTTCAGATCTGCTTCCTTTGATTGAACTTTTGAGGCCATGGAAACT TGTGATGCATATAATATTAGGCATGTTATAACAATATGGAATTCAGAATCTTGCACTGATTTTTGTGTTTTCTCTGCTCT CCAGGTGGCCCTAAGTTTGAGCCTCTCTACCGTGACATGGAGAAGGGAGATGAGGACTGGAATGAGTTTAATGACATCAA TAAGCTCATTATAAGGTCCCCACTTCGGACAGAGTACAGAATTGCTTTCCCTCATCTTTATAACAACAGGCCTCGCAAAG TAAAGCTTTGTATCTACCATACTCCCATGATCATGTACATAAAAACTGAAGATCCTGATCTACCTGCATTCTATTATGAT CCCTTGATACACCCAATAACCAGTGCTAACAAGGATCGACGGGAGAAGAGAATCCATGATGAGGATGATGATGATGATTG GATATTGCCAGATGGTGTGGAACCTTTACTTAAAGATACACAGCTATATACAGACACCACAGCTGCTGGAATATCCTTGC TGTTTGCTCCTCGTCCTTTTAATATGAGATCTGGTCGGATGAGGCGGGCTGAAGATATTCCTCTTGTGTCAGAATGGTAT AAGGAGCATTGGTAAGTTGTACCCTCCCTCCCTTGCATGATTTATAGATTATCTTTAATAATATATATTGGAATGCATAT TTCTCTATCTTGAAAGCTAACCAGTTCTTTTTTAATTGCCCAACAGTCCTCCATCATATCCAGTTAAAGTTCGAGTTAGT TATCAAAAGTTACTGAAGTGTTTTGTGTTGAATGAGCTGCATCATAGGCCTCCAAAGGCTCAAAAAAAGAAGCACTTATT CAGATCTCTCCAAGCAACAAAGTTTTTCCAGACCACAGAACTTGATTGGGTTGAAGCAGGTCTTCAAGTTTGTAGGCAGG GGTATAACATGTTGAATCTGTTGATCCACAGGAAGAATTTGAACTACCTTCATCTTGATTATAATTTCAATCTTAAGCCT GTGAAAACGTTGACTACTAAGGAGAGAAAGAAGTCACGATTTGGTAATGCTTTTCATCTTTGTCGTGAGATCCTACGTTT GACAAAACTTGTGGTGGATGCCAATGTTCAGTTCCGATTGGGTAATGTTGATGCTTTCCAGTTGGCAGATGGCCTCCAAT ATACCTTTTCACATGTTGGTCAATTGACTGGTATGTACCGATATAAGTACAGGCTTATGCGACAAATAAGAATGTGCAAG GACTTGAAACATTTGATTTACTATCGTTTTAACACTGGGCCTGTTGGGAAGGGACCTGGCTGTGGGTTTTGGGCTCCAAT GTGGAGGGTATGGTTATTCTTCCTTCGTGGTATTGTGCCCCTTCTTGAACGATGGCTAGGAAATTTGCTTGCACGTCAAT TTGAAGGGCGCCACTCAAAAGGAGTGGCTAAGACAGTCACCAAGCAACGAGTTGAGAGCCACTTTGATTTAGAGCTTCGA GCAGCTGTTATGCATGATGTTCTTGATGCCATGCCAGGTAATAATTATTAAATTTAACATTATTTATGCTTTCTGTATTT GGATTTCTTTTCACTGAGTGGCTTCTGCAATTATTTCCTGTGAGATTTACTAAAGTTAAGGTTTTCTCCTTCCTTGAATG ACAGAGGGTATAAAGCAGAACAAGGCAAGAACTATATTGCAGCATTTGAGTGAGGCTTGGCGCTGCTGGAAAGCAAATAT TCCTTGGAAGGTAAGCTTTTTTATTGTAATTTGTTGACTAAATTGTATTTTAAGTGAAATAGTACAGCTATAAAGTATGA ACACATGGTCAGGTATGGATAATAGCACTTCTATGATGTCTAGATTTTTGTTTATGGTTGTAGTTTTGAGCATTGTGAGG CACAATTAGCAATGGAAAAACGTATTTCCAAAAATACGAACTGATTCATTTATTCTAGCCATTAACAGATACTTGCTCAT TTTTAGTCTTACAGTAAATATTTGGCCTCATTTGAATTTGGTTTATGCATTCCTGGCCTTATGGCTGATTCACTTGTTTT GGCAACGTGTAGGTTCCTGGTCTGCCTGTTCCCATAGAAAACATGATACTTCGATATGTGAAATCAAAAGCGGACTGGTG GACCAATGTTGCTCATTATAATCGTGAGCGTATTAGAAGAGGTGCAACTGTGGATAAAACTGTCTGTCGTAAGAATCTCG GAAGATTGACACGCTTGTGGCTGAAGGCTGAGCAGGTGCATTTAGTGTTCTCTATGACTCATGAGTTTGTGTCTCATTAT TTTTGTAGAATTATTCTTTAGCTTTTCTTATAGATGTCTTGTTTTCATGAAGTTACTTTCTGATCTTCTATCCTTGCTGT AGGAACGTCAACACAATTATTTGAAAGATGGGCCATATGTTACCCCTGAAGAAGCTGTTGCTATATATACAACTACAGTA CATTGGTTGGAATCTAGGAAGTTCTCTCCTATTCCATTTCCACCTTTATCATACAAGCATGATACGAAGTTGCTTATCCT TGCACTTGAGAGGTTGAAAGAATCTTACAGTGTTGCTGTGAGGTTGAATCAACTGCAAAGAGAAGAATTGGGGCTGATTG AGCAAGCTTATGACAATCCACACGAGGCATTATCACGAATCAAGCGGCACCTCCTCACCCAACGTGCCTTCAAAGAAGTA TGATATTATATTCAAACTTTTGTAATTTTAGGGTGTTTATTCTCATTCCTATACAAGACAAGTATAATTTTATTTCCTTT TTTGGCAGGTTGGTATAGAGTTTATGGATTTATATAGCTACTTGATTCCGGTTTATGAAATTGAGCCTCTTGAGAAGATT ACCGATGCATATCTTGACCAATATCTTTGGTATGAGGGTGACAAGCGTCATCTCTTTCCTAACTGGATCAAGCCAGCAGA TTCGGAGCCACCTCCCCTATTGGTTTACAAATGGTGTCAAGGTATAAACAATTTGCAAGGTATATGGGACACCAGTGATG GTCAATGCGTTGTTATGTTGCAGACCAAGTTTGAGAAGTTTTTTGAGAAGATTGATTTAACAATGCTTAACAGGTATGTG TTCGAGAATTGCTAAATCACTTTCTGAATGTAATCATGACTATCTTCACCTCTAATTGTGTTTCTATTGTTGCAGGCTTC TGCGTCTGGTTCTAGACCATAATATTGCTGATTATGTCACTGCAAAAAACAATGTTGTGTTGTCATATAAGGATATGAGT CATACAAATTCATATGGACTTATACGAGGTTTACAGTTTGCATCATTTGTTGTTCAATATTATGGACTGGTATTGGATCT TTTGCTTCTTGGACTGACTCGAGCCAGTGAGATTGCTGGTCCACCGCAGATGCCGAATGAATTCATTACTTACTGGGACA CAAAAGTTGAGACTAGGCATCCAATTAGGCTGTATTCAAGGTACATAGATCGGGTACATATATTATTTCGCTTCACCCAT GAAGAGGCTCGGGACCTCATTCAGCGATATCTCACTGAGCACCCTGATCCTAACAATGAGAACATGGTGGGGTACAATAA TAAGAAGTGCTGGCCAAGAGATGCAAGAATGAGGCTCATGAAACATGATGGTATTTGTTTCTCCTTTTGCCTTGTGTAGG TTTTGCATTTTGACTTTTTATTTGACTCGTTCTTAATGTTTTGTTTGACAATTCACTTCGTTGTAATTTCAGTCAATCTT GGAAGGAGTGTCTTTTGGGATATGAAGAATCGTCTTCCTCGAAGCATTACAACTTTGGAGTGGGAGAACAGCTTTGTTTC TGTTTACAGCAAGGATAATCCAAACTTGCTATTTAGCATGTAAGTAATGATTATTTTAAGCAATTGATCTTTGTGTTCCT CCCCCCCCCCTGCTGTGAAATGTGAAAAAGGTTATGTTTTCAAATTTTTCGCTTTGCATCGAAGTCTTTCAGAATTTTAG ACTGCCTTGGTTGTCTTGCTTGACATATTGATTGAAAATGTAGTTTTTTATCTCTTCAGTTTCCTTCTGTATATATCCAC ATCTTCCCCAAAAGTATCCTCTCTACCAAATTGTCATTACTGACTCCCAAGTTGTTTTCCTTTTTGTGGAATCTTCCTTT AGTGTGTGTATAACGATGAATTAAGCTCTCTTTGCTGACATCTTTCAATGGCCTACAGGTGTGGGTTTGAAGTGAGGATA CTTCCGAAAATTCGTATGACTCAAGAAGCATTCAGTAACACAAGAGATGGAGTCTGGAATCTCCAGAATGAACAAACTAA AGAAAGGACAGCTGTCGCTTTCTTAAGAGTTGATGATGAACATATGAAAGTGTTTGAGAACCGTGTGAGGCAGATTCTTA TGTCTTCGGGGTCTACTACGTTCACAAAAATTGTCAACAAGTGGAATACAGCTTTAATAGGTATGTGAAGTTGCATTGTA TGAACATTTGCAGAGGTTATCATTAGTTTTCTCATTGAACTTTGTTATTTGTTTTTATTAGGACTCATGACTTACTTCAG AGAGGCAACTGTACATACTCAAGAACTGTTGGATTTGCTTGTTAAATGTGAGAATAAGATTCAGACCCGTATTAAGATTG GGCTCAACTCAAAGATGCCTAGCAGGTAAATGATCAGATACTTTTTACTACTTCGTTTGAAGCTTTGAAATTTTAATTGA ATATATCCATGCTACTGTCTCTTTTATCAGGTTTCCACCTGTCATTTTCTACACCCCGAAAGAAATTGGAGGGCTCGGAA TGTTGTCTATGGGTCACATCTTGATTCCACAAAGTGATCTCCGATACAGTCAGCAGACTGATGTTGGTGTAACCCACTTC AGGAGTGGGATGAGCCATGAGGAGGATCAGCTGATTCCCAACCTTTATCGATACATCCAGGTGAACCTCAATTCTCTCCC CATTATATGTAATAGATGACATTTCCTATTAAAAATGTAATAGTTGACATGCATTTGTGCTCAAATATGATGTCTGTTGA TTCATATAGACTCCTGTGTAGATTCATATATATATATATTCATATGTAGTTCATCTTATTTTTATTATTATTCATGCAGC CTTGGGAGAGTGAGTTCATTGATTCACAGCGTGTCTGGGCTGAATATGCATTGAAAAGGCAGGAAGCATCAGCGCAAAAC AGGCGTTTGACCCTTGAAGATCTGGAAGTGAGTGTTCTGAGATCCCTCTTAATGATCTGGACATTAGGATTTCGGTGTTC ATGTGAATAGTATTGATGGCAATGTGCTTGTTTTTCCTTAGAGGGTAATTTACTTGCTGACTTATTCTTGATTTATTTTG CAGGACTCGTGGGATAGAGGAATACCACGTATTAACACTTTGTTTCAGAAAGATAGACACACTTTGGCTTATGATAAAGG ATGGAGGGTGCGTACAGACTTCAAGCAGTACCAAGTTCTGAAACAAAATCCGTTCTGGTGGACTCACCAAAGGCATGATG GGAAGTTGTGGAACTTGAACAATTACCGAACTGATGTTATTCAAGCCCTTGGAGGAGTTGAAGGAATTCTTGAACACACA TTATTCAAAGGAACATAGTGAGTCTTATTTTCCTTTGAACTTGCATTGCTGTTTGAGTTGGGGGTGTGCTTTCTCATGCT TAACCATTGTGCCAATTAGAAAAGAATCCTGAGTTTATCCGCTTATTTTTATACATCCTTTTATTAAGAGGAGTATGATA TGGACATAGGAACACACCAAATTTTAGAAATTATAGTACAAAGGCACGTGCACTGACACAAAATAAAAAACATTCACATT TCATGAGTCATAATGTCATCTATGAGCTTTATTATTTACAATATCCTAAAAAATGAAATTGGCACGTGATAGAAGCACAT CTGTCTTAATTTAATCATTTGGTTCAGTATTTAGCTCTTGCTATTTGCGTCTATTTTATAGAAGTTGTGATTGACCCACT GTTGTTTTTCACTGTTAGTTTTCCAACTTGGGAAGGTCTCTTCTGGGAAAAGGCATCAGGCTTTGAGGAATCTATGAAGT ATAAGAAGCTCACCAATGCTCAGAGATCTGGTCTCAACCAGATACCCAACCGTAGATTTACACTTTGGTGGTCACCTACT ATTAATCGAGCCAATGTTTATGTGGGTTTCCAAGTGCAGCTAGATCTTACTGGTATTTTCATGCATGGGAAAATACCAAC TTTGAAGATATCTCTTATTCAGATATTCAGAGCTCACTTGTGGCAGAAGATCCATGAGAGTGTTGTCATGGATCTTTGTC AGGTTTTGGATCAAGAGTTGGATGCTCTGGAGATTGAAACTGTTCAGAAGGAAACAATTCATCCTAGGAAAAGTTACAAA ATGAACAGTTCTTGTGCAGACATTCTTCTCTTTGCTGCGCATAGATGGCCAATGTCAAAGCCTAGTCTTGTCGCTGAATC TAAGGATGTTTTTGATCAGAAGGCAAGCAATAAGTACTGGATTGATGTTCAGCTTCGATGGGGTGATTATGACTCTCATG ATATTGAGCGTTACACTCGAGCCAAATTTATGGACTACACAACAGATAATATGTCAATATATCCGTCTCCTACTGGTGCG TGTCTATCATTTTCCTTTGCTCCTTCACATGTTTTAATATTTATTGTTCACTTGATTGTTTTTTCCATGCAGGGGTGATG ATTGGTCTCGACTTGGCGTACAACTTACATTCTGCTTTTGGGAACTGGTTCCCTGGGTCAAAGCCACTGCTTCAGCAAGC CATGAATAAGATCATGAAGGTAAACAAACATCATATATCTGAAGTCTTACAAATTATGAATCATTTGGGGTACATGGAAT TCTTTTATTTGGGGATAAATATTGTTCCTCTGACTGGTTTCAACTTTCAACCTATACTTACACATCTTATTTACACCATC TCCACTTAGCTCTTGTGGCTGAAGTGTTTGTTTCATTGATTATCTAACACAGTTCTTTTACTTATGATGTTGTGTATATG CAGTCAAATCCTGCGTTGTATGTTTTGAGGGAACGTATAAGGAAAGGTTTGCAGCTGTACTCTTCTGAGCCGACTGAACC ATATTTGTCTTCCCAAAACTATGGAGAGATATTCAGCAACCAAATTATTTGGTTTGTTGATGACACTAATGTGTATCGTG TTACAATTCACAAGACTTTTGAAGGAAATCTTACAACAAAACCCATCAATGGTGCCATATTTATTTTCAACCCAAGGACT GGACAGTTGTTTCTTAAGGTTTGTGTTCATGCTCTTGTTCTTATTGTGATGTTTCTAGTGTTAGTTATCTGGCTGTTGAT CAATATCATACTTTGTAGGTTATTCATACAAGTGTCTGGGCTGGTCAGAAGCGTCTTGGCCAGTTGGCCAAGTGGAAAAC AGCTGAAGAAGTTGCTGCTCTAGTAAGGTCTTTGCCTGTAGAAGAACAGCCAAAGCAGATTATTGTCACTCGTAAAGGCA TGTTGGATCCATTGGAGGTTCACTTGCTGGATTTCCCCAACATTGTTATCAAAGGAAGTGAGCTGCAGCTTCCTTTCCAG GCATGTTTGAAAATTGAGAAATTTGGGGATCTTATTTTGAAGGCCACGGAGCCACAAATGGTCTTGTTCAACATTTATGA TGACTGGCTGAAGAGTATTTCATCATACACTGCATTCTCTAGACTGATTCTGATTCTCCGAGCTCTTCATGTAAATAATG AAAAGGCAAAGATGTTACTGAAGCCTGACAAAACTATCATCACCGAGCCTCATCACATCTGGCCTTCTCTAAGTGATGAC CAGTGGATGAAGGTAAAAGTTTAATGTGCAATTTTTACCTGTCTTTCGTTGGTTAAATGTTTACATTTTTTAACAGTGTG CTACACCGTCAAGATTGACTTTTATTTGTTTGTTGAGTTATATTTTGTTCTCATGTAACCTAAACATGATGCATTGTGAC AGGTGGAGGTTGCATTAAGAGATCTTATACTTTCAGATTATGCCAAGAAAAACAATGTGAACACTTCAGCTCTGACTCAG TCTGAGATTCGTGATATTATTCTTGGAGCTGAAATTACTCCACCTTCACAACAGCGGCAACAGATTGCAGAGATTGAGCA ACAGGTCATTTTTTTTTTCCTTCCTGGACACATTCAACACTTCGCCCTCCAATCTATCCTGCCGTCTCTTGCTTGAGTTA TTTACTCATTCTGTTCTGTATTTTCTATTTTGTAGGCTCATGAAGCTAATCAGGCGACAGCTGTAACAACAAAGACCACA AATGTTCATGGTGAAGAACTTATAGTAACTACCACCAGTCCCTATGAGCAAGCTGCATTTGGTTCTAAGACTGACTGGCG TGTCAGAGCAATATCCGCCACTAATTTATACCTTCGTGTAAACCATATATATGTGAATTCCGAGGATATAAAGGTTTGAA CTATTTTTCTTCATTCCTCCCTCGTTTACACTTCTAGAACTTCTGTCATATGCTAATGTTGGATTTTGTGGTGCAGGAAA CCGGCTACACCTATATTATGCCAAAGAACATTTTGAAGAAGTTCATTTGCATAGCAGATCTTCGAACACAAATTGCTGGG TACTTGTATGGCATAAGTCCTCCGGACAATCCTCAGGTGAAGGAAATTCGCTGCATTGTGATGACACCACAATATGGGAC TCATCAACAAGTCCATCTCCCATCAGCTCTTCCAGAGCATGATTTCTTGAATGATTTGGAGCCCTTGGGATGGATGCATA CTCAACCAAATGAGCTTCCCCAGTTGTCGCCTCAGGTTTGCTTGCATTAGCTTACTTATATTTTTCTTTTGTTTTTAATT AATTTCAATTAACACGACATGGTGACGATTTTTTGAAAGTAAAATAAAAAAATTAGATTGTTGTTTTACTTATCAGGGAA ATATATTTATGATTCATGGTATACATTGTCTCACTTGAGGAATGATTATTGCAGGATCTCACTTCACATGCTAAGATCCT AGAGAACAATAAGCAATGGGATGGGGAGAAATGTATTATCTTGACTTGTAGCTTTACTCCTGGTTCCTGTTCTTTAACCG CGTACAAACTCACTCCATCTGGTTATGAATGGGGCCGTATCAACAAGGATACAGGAAGCAATCCTCATGGTTACCTTCCC ACTCATTATGAAAAGGTTCAGATGCTCCTCAGTGATCGCTTCCTTGGTTTCTACATGGTACGTTTTCCGACCTCCTCAAG TTATCTATTTTCTTCTTTGAATATGATTGGGTGATGGTTTATATATTTATATTGATGTCTTATGTAAAAATATATTAAAA TTGTGCCTTTTAACCTTTTTACTTATTATTGCTACAATCTGTTATTTTTATTTTATTTTTTGCATTGTTTGACTGATGGT TCTGTGGCTAAAATCTGCAGATTCCTGATAATGGTCCATGGAATTACAACTTCATGGGGGTGAGACACGCACCATCGATG AAGTATGGAGTGAAACTTGGGACACCTAGGGAGTACTACAACGAGGACCATAGACCCACCCATTTCTTAGAGTTCAGCAA CATGGAGGAAAAAGGGGAAACAGTTGTTGAGGGTGATCGTGAGGATACATTCTCTTGA
CDS sequence (LotjaGi3g1v0008200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGGAAAATTATCAGGCAAGGATCATGGGGATATGTCCTCGAAGAAATTTCGTCATGATAAACGTGTTTATCTCGG GGCACTTAAATTCATACCACATGCAGTTTACAAGCTCCTGGAAAATATGCCCATGCCGTGGGAGCAGGTCCGAGATATCA AGGTTTTGTACCATATTTCTGGGGCTATCACATTTGTCAATGAAATACCTTGGGTTGTGGAGCCTATTTATCTGGCTCAG TGGGGTACAATGTGGATCATGATGAGAAGGGAGAAAAGGGATCGTCGTCACTTTAAGAGGATGCGATTTCCCCCATTTGA TGACGAGGAGCCTCCTCTTGACTATGCTGATAATCTTTTGGATGTTGATCCTCTAGAGCCAATTCAACTGGAGCTCGATG AAGAAGAAGATTCTGCTGTATATACTTGGTTTTATGATCACAAGCCTCTTGTTAAAACAAAGCTCATAAATGGTCCTAGT TACCGGAAATGGCATCTTTCTCTTCCTATAATGGCTACTTTGCATCGGCTCGCTGGGCAGCTTCTGTCTGATTTGATCGA CCGCAATTACTTTTACTTGTTTGACATGGAGTCTTTTTTTACGGCAAAGGCTTTGAACATGTGCATACCTGGTGGCCCTA AGTTTGAGCCTCTCTACCGTGACATGGAGAAGGGAGATGAGGACTGGAATGAGTTTAATGACATCAATAAGCTCATTATA AGGTCCCCACTTCGGACAGAGTACAGAATTGCTTTCCCTCATCTTTATAACAACAGGCCTCGCAAAGTAAAGCTTTGTAT CTACCATACTCCCATGATCATGTACATAAAAACTGAAGATCCTGATCTACCTGCATTCTATTATGATCCCTTGATACACC CAATAACCAGTGCTAACAAGGATCGACGGGAGAAGAGAATCCATGATGAGGATGATGATGATGATTGGATATTGCCAGAT GGTGTGGAACCTTTACTTAAAGATACACAGCTATATACAGACACCACAGCTGCTGGAATATCCTTGCTGTTTGCTCCTCG TCCTTTTAATATGAGATCTGGTCGGATGAGGCGGGCTGAAGATATTCCTCTTGTGTCAGAATGGTATAAGGAGCATTGTC CTCCATCATATCCAGTTAAAGTTCGAGTTAGTTATCAAAAGTTACTGAAGTGTTTTGTGTTGAATGAGCTGCATCATAGG CCTCCAAAGGCTCAAAAAAAGAAGCACTTATTCAGATCTCTCCAAGCAACAAAGTTTTTCCAGACCACAGAACTTGATTG GGTTGAAGCAGGTCTTCAAGTTTGTAGGCAGGGGTATAACATGTTGAATCTGTTGATCCACAGGAAGAATTTGAACTACC TTCATCTTGATTATAATTTCAATCTTAAGCCTGTGAAAACGTTGACTACTAAGGAGAGAAAGAAGTCACGATTTGGTAAT GCTTTTCATCTTTGTCGTGAGATCCTACGTTTGACAAAACTTGTGGTGGATGCCAATGTTCAGTTCCGATTGGGTAATGT TGATGCTTTCCAGTTGGCAGATGGCCTCCAATATACCTTTTCACATGTTGGTCAATTGACTGGTATGTACCGATATAAGT ACAGGCTTATGCGACAAATAAGAATGTGCAAGGACTTGAAACATTTGATTTACTATCGTTTTAACACTGGGCCTGTTGGG AAGGGACCTGGCTGTGGGTTTTGGGCTCCAATGTGGAGGGTATGGTTATTCTTCCTTCGTGGTATTGTGCCCCTTCTTGA ACGATGGCTAGGAAATTTGCTTGCACGTCAATTTGAAGGGCGCCACTCAAAAGGAGTGGCTAAGACAGTCACCAAGCAAC GAGTTGAGAGCCACTTTGATTTAGAGCTTCGAGCAGCTGTTATGCATGATGTTCTTGATGCCATGCCAGAGGGTATAAAG CAGAACAAGGCAAGAACTATATTGCAGCATTTGAGTGAGGCTTGGCGCTGCTGGAAAGCAAATATTCCTTGGAAGGTTCC TGGTCTGCCTGTTCCCATAGAAAACATGATACTTCGATATGTGAAATCAAAAGCGGACTGGTGGACCAATGTTGCTCATT ATAATCGTGAGCGTATTAGAAGAGGTGCAACTGTGGATAAAACTGTCTGTCGTAAGAATCTCGGAAGATTGACACGCTTG TGGCTGAAGGCTGAGCAGGAACGTCAACACAATTATTTGAAAGATGGGCCATATGTTACCCCTGAAGAAGCTGTTGCTAT ATATACAACTACAGTACATTGGTTGGAATCTAGGAAGTTCTCTCCTATTCCATTTCCACCTTTATCATACAAGCATGATA CGAAGTTGCTTATCCTTGCACTTGAGAGGTTGAAAGAATCTTACAGTGTTGCTGTGAGGTTGAATCAACTGCAAAGAGAA GAATTGGGGCTGATTGAGCAAGCTTATGACAATCCACACGAGGCATTATCACGAATCAAGCGGCACCTCCTCACCCAACG TGCCTTCAAAGAAGTTGGTATAGAGTTTATGGATTTATATAGCTACTTGATTCCGGTTTATGAAATTGAGCCTCTTGAGA AGATTACCGATGCATATCTTGACCAATATCTTTGGTATGAGGGTGACAAGCGTCATCTCTTTCCTAACTGGATCAAGCCA GCAGATTCGGAGCCACCTCCCCTATTGGTTTACAAATGGTGTCAAGGTATAAACAATTTGCAAGGTATATGGGACACCAG TGATGGTCAATGCGTTGTTATGTTGCAGACCAAGTTTGAGAAGTTTTTTGAGAAGATTGATTTAACAATGCTTAACAGGC TTCTGCGTCTGGTTCTAGACCATAATATTGCTGATTATGTCACTGCAAAAAACAATGTTGTGTTGTCATATAAGGATATG AGTCATACAAATTCATATGGACTTATACGAGGTTTACAGTTTGCATCATTTGTTGTTCAATATTATGGACTGGTATTGGA TCTTTTGCTTCTTGGACTGACTCGAGCCAGTGAGATTGCTGGTCCACCGCAGATGCCGAATGAATTCATTACTTACTGGG ACACAAAAGTTGAGACTAGGCATCCAATTAGGCTGTATTCAAGGTACATAGATCGGGTACATATATTATTTCGCTTCACC CATGAAGAGGCTCGGGACCTCATTCAGCGATATCTCACTGAGCACCCTGATCCTAACAATGAGAACATGGTGGGGTACAA TAATAAGAAGTGCTGGCCAAGAGATGCAAGAATGAGGCTCATGAAACATGATGTCAATCTTGGAAGGAGTGTCTTTTGGG ATATGAAGAATCGTCTTCCTCGAAGCATTACAACTTTGGAGTGGGAGAACAGCTTTGTTTCTGTTTACAGCAAGGATAAT CCAAACTTGCTATTTAGCATGTGTGGGTTTGAAGTGAGGATACTTCCGAAAATTCGTATGACTCAAGAAGCATTCAGTAA CACAAGAGATGGAGTCTGGAATCTCCAGAATGAACAAACTAAAGAAAGGACAGCTGTCGCTTTCTTAAGAGTTGATGATG AACATATGAAAGTGTTTGAGAACCGTGTGAGGCAGATTCTTATGTCTTCGGGGTCTACTACGTTCACAAAAATTGTCAAC AAGTGGAATACAGCTTTAATAGGACTCATGACTTACTTCAGAGAGGCAACTGTACATACTCAAGAACTGTTGGATTTGCT TGTTAAATGTGAGAATAAGATTCAGACCCGTATTAAGATTGGGCTCAACTCAAAGATGCCTAGCAGGTTTCCACCTGTCA TTTTCTACACCCCGAAAGAAATTGGAGGGCTCGGAATGTTGTCTATGGGTCACATCTTGATTCCACAAAGTGATCTCCGA TACAGTCAGCAGACTGATGTTGGTGTAACCCACTTCAGGAGTGGGATGAGCCATGAGGAGGATCAGCTGATTCCCAACCT TTATCGATACATCCAGCCTTGGGAGAGTGAGTTCATTGATTCACAGCGTGTCTGGGCTGAATATGCATTGAAAAGGCAGG AAGCATCAGCGCAAAACAGGCGTTTGACCCTTGAAGATCTGGAAGACTCGTGGGATAGAGGAATACCACGTATTAACACT TTGTTTCAGAAAGATAGACACACTTTGGCTTATGATAAAGGATGGAGGGTGCGTACAGACTTCAAGCAGTACCAAGTTCT GAAACAAAATCCGTTCTGGTGGACTCACCAAAGGCATGATGGGAAGTTGTGGAACTTGAACAATTACCGAACTGATGTTA TTCAAGCCCTTGGAGGAGTTGAAGGAATTCTTGAACACACATTATTCAAAGGAACATATTTGGTTCAGTATTTAGCTCTT GCTATTTGCGTCTATTTTATAGAAGTTGTGATTGACCCACTGTTGTTTTTCACTGTTAGTTTTCCAACTTGGGAAGGTCT CTTCTGGGAAAAGGCATCAGGCTTTGAGGAATCTATGAAGTATAAGAAGCTCACCAATGCTCAGAGATCTGGTCTCAACC AGATACCCAACCGTAGATTTACACTTTGGTGGTCACCTACTATTAATCGAGCCAATGTTTATGTGGGTTTCCAAGTGCAG CTAGATCTTACTGGTATTTTCATGCATGGGAAAATACCAACTTTGAAGATATCTCTTATTCAGATATTCAGAGCTCACTT GTGGCAGAAGATCCATGAGAGTGTTGTCATGGATCTTTGTCAGGTTTTGGATCAAGAGTTGGATGCTCTGGAGATTGAAA CTGTTCAGAAGGAAACAATTCATCCTAGGAAAAGTTACAAAATGAACAGTTCTTGTGCAGACATTCTTCTCTTTGCTGCG CATAGATGGCCAATGTCAAAGCCTAGTCTTGTCGCTGAATCTAAGGATGTTTTTGATCAGAAGGCAAGCAATAAGTACTG GATTGATGTTCAGCTTCGATGGGGTGATTATGACTCTCATGATATTGAGCGTTACACTCGAGCCAAATTTATGGACTACA CAACAGATAATATGTCAATATATCCGTCTCCTACTGGGGTGATGATTGGTCTCGACTTGGCGTACAACTTACATTCTGCT TTTGGGAACTGGTTCCCTGGGTCAAAGCCACTGCTTCAGCAAGCCATGAATAAGATCATGAAGTCAAATCCTGCGTTGTA TGTTTTGAGGGAACGTATAAGGAAAGGTTTGCAGCTGTACTCTTCTGAGCCGACTGAACCATATTTGTCTTCCCAAAACT ATGGAGAGATATTCAGCAACCAAATTATTTGGTTTGTTGATGACACTAATGTGTATCGTGTTACAATTCACAAGACTTTT GAAGGAAATCTTACAACAAAACCCATCAATGGTGCCATATTTATTTTCAACCCAAGGACTGGACAGTTGTTTCTTAAGGT TATTCATACAAGTGTCTGGGCTGGTCAGAAGCGTCTTGGCCAGTTGGCCAAGTGGAAAACAGCTGAAGAAGTTGCTGCTC TAGTAAGGTCTTTGCCTGTAGAAGAACAGCCAAAGCAGATTATTGTCACTCGTAAAGGCATGTTGGATCCATTGGAGGTT CACTTGCTGGATTTCCCCAACATTGTTATCAAAGGAAGTGAGCTGCAGCTTCCTTTCCAGGCATGTTTGAAAATTGAGAA ATTTGGGGATCTTATTTTGAAGGCCACGGAGCCACAAATGGTCTTGTTCAACATTTATGATGACTGGCTGAAGAGTATTT CATCATACACTGCATTCTCTAGACTGATTCTGATTCTCCGAGCTCTTCATGTAAATAATGAAAAGGCAAAGATGTTACTG AAGCCTGACAAAACTATCATCACCGAGCCTCATCACATCTGGCCTTCTCTAAGTGATGACCAGTGGATGAAGGTGGAGGT TGCATTAAGAGATCTTATACTTTCAGATTATGCCAAGAAAAACAATGTGAACACTTCAGCTCTGACTCAGTCTGAGATTC GTGATATTATTCTTGGAGCTGAAATTACTCCACCTTCACAACAGCGGCAACAGATTGCAGAGATTGAGCAACAGGCTCAT GAAGCTAATCAGGCGACAGCTGTAACAACAAAGACCACAAATGTTCATGGTGAAGAACTTATAGTAACTACCACCAGTCC CTATGAGCAAGCTGCATTTGGTTCTAAGACTGACTGGCGTGTCAGAGCAATATCCGCCACTAATTTATACCTTCGTGTAA ACCATATATATGTGAATTCCGAGGATATAAAGGAAACCGGCTACACCTATATTATGCCAAAGAACATTTTGAAGAAGTTC ATTTGCATAGCAGATCTTCGAACACAAATTGCTGGGTACTTGTATGGCATAAGTCCTCCGGACAATCCTCAGGTGAAGGA AATTCGCTGCATTGTGATGACACCACAATATGGGACTCATCAACAAGTCCATCTCCCATCAGCTCTTCCAGAGCATGATT TCTTGAATGATTTGGAGCCCTTGGGATGGATGCATACTCAACCAAATGAGCTTCCCCAGTTGTCGCCTCAGGATCTCACT TCACATGCTAAGATCCTAGAGAACAATAAGCAATGGGATGGGGAGAAATGTATTATCTTGACTTGTAGCTTTACTCCTGG TTCCTGTTCTTTAACCGCGTACAAACTCACTCCATCTGGTTATGAATGGGGCCGTATCAACAAGGATACAGGAAGCAATC CTCATGGTTACCTTCCCACTCATTATGAAAAGGTTCAGATGCTCCTCAGTGATCGCTTCCTTGGTTTCTACATGATTCCT GATAATGGTCCATGGAATTACAACTTCATGGGGGTGAGACACGCACCATCGATGAAGTATGGAGTGAAACTTGGGACACC TAGGGAGTACTACAACGAGGACCATAGACCCACCCATTTCTTAGAGTTCAGCAACATGGAGGAAAAAGGGGAAACAGTTG TTGAGGGTGATCGTGAGGATACATTCTCTTGA
Protein sequence (LotjaGi3g1v0008200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGKLSGKDHGDMSSKKFRHDKRVYLGALKFIPHAVYKLLENMPMPWEQVRDIKVLYHISGAITFVNEIPWVVEPIYLAQ WGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVYTWFYDHKPLVKTKLINGPS YRKWHLSLPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLII RSPLRTEYRIAFPHLYNNRPRKVKLCIYHTPMIMYIKTEDPDLPAFYYDPLIHPITSANKDRREKRIHDEDDDDDWILPD GVEPLLKDTQLYTDTTAAGISLLFAPRPFNMRSGRMRRAEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKCFVLNELHHR PPKAQKKKHLFRSLQATKFFQTTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGN AFHLCREILRLTKLVVDANVQFRLGNVDAFQLADGLQYTFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVG KGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIK QNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRL WLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQRE ELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKP ADSEPPPLLVYKWCQGINNLQGIWDTSDGQCVVMLQTKFEKFFEKIDLTMLNRLLRLVLDHNIADYVTAKNNVVLSYKDM SHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPQMPNEFITYWDTKVETRHPIRLYSRYIDRVHILFRFT HEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDN PNLLFSMCGFEVRILPKIRMTQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVN KWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLR YSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEASAQNRRLTLEDLEDSWDRGIPRINT LFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYLVQYLAL AICVYFIEVVIDPLLFFTVSFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQ LDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAA HRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLHSA FGNWFPGSKPLLQQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTF EGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEV HLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLL KPDKTIITEPHHIWPSLSDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEQQAH EANQATAVTTKTTNVHGEELIVTTTSPYEQAAFGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKF ICIADLRTQIAGYLYGISPPDNPQVKEIRCIVMTPQYGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLT SHAKILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRINKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMIP DNGPWNYNFMGVRHAPSMKYGVKLGTPREYYNEDHRPTHFLEFSNMEEKGETVVEGDREDTFS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 1437 | 1430 | 0.0 | ||
| PANTHER | 8 | 1437 | 1430 | 0.0 | – | |
| Pfam | 8 | 146 | 139 | 2.0E-77 | ||
| Pfam | 334 | 739 | 406 | 1.2E-236 | ||
| Pfam | 924 | 1014 | 91 | 8.6E-47 | ||
| SUPERFAMILY | 935 | 1192 | 258 | 5.54E-91 | ||
| Gene3D | 1122 | 1242 | 121 | 2.1E-62 | ||
| Pfam | 1149 | 1282 | 134 | 7.3E-73 | ||
| Coils | 1330 | 1350 | 21 | - | – | |
| Pfam | 1381 | 1440 | 60 | 3.4E-19 | ||
| PANTHER | 1447 | 2303 | 857 | 0.0 | ||
| PANTHER | 1447 | 2303 | 857 | 0.0 | – | |
| Pfam | 1447 | 1566 | 120 | 8.3E-65 | ||
| Gene3D | 1547 | 1718 | 172 | 5.0E-95 | – | |
| Pfam | 1726 | 1955 | 230 | 1.0E-129 | ||
| Gene3D | 1727 | 1887 | 161 | 1.8E-94 | ||
| SUPERFAMILY | 1729 | 1981 | 253 | 1.33E-123 | ||
| CDD | 1732 | 1982 | 251 | 0.0 | ||
| Gene3D | 1888 | 1986 | 99 | 1.3E-49 | ||
| Gene3D | 2024 | 2303 | 280 | 1.0E-138 | – | |
| CDD | 2033 | 2283 | 251 | 8.55164E-169 | – | |
| SMART | 2065 | 2199 | 135 | 1.4E-24 | ||
| Pfam | 2067 | 2165 | 99 | 6.4E-7 | ||
| ProSiteProfiles | 2069 | 2200 | 132 | 19.976 | ||
| Pfam | 2178 | 2300 | 123 | 9.8E-51 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | MRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Spliceosomal complex | Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA. | ||
| Molecular function | U6 snRNA binding | Interacting selectively and non-covalently with the U6 small nuclear RNA (U6 snRNA). | ||
| Molecular function | U5 snRNA binding | Interacting selectively and non-covalently with the U5 small nuclear RNA (U5 snRNA). |
Expression pattern of LotjaGi3g1v0008200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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