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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0008200 |
| Transcript ID | LotjaGi3g1v0008200.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pre-mRNA-processing-splicing factor 8; TAIR: AT1G80070.1 Pre-mRNA-processing-splicing factor; Swiss-Prot: sp|Q9SSD2|PRP8A_ARATH Pre-mRNA-processing-splicing factor 8A; TrEMBL-Plants: tr|V7BXW4|V7BXW4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0008200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:920935..932012) extracted from Lotus japonicus Gifu genome v1.2.
TTTGTTCCGAATCGTGAACTCGGAAAATGATTATTCGAAGCGCTATTCCCCCTTTTTAATTTTGTAGGTTTTTTTGTGTG AGTGTAAAGCTTTCTAAGTTTGAATGATGCTCATGGTTAGCCAGATAGATAGGTGTAGAGCCTTCACTGTTTTATATTAA GTTAGTTGATGCTGGGCATGTAGCATAGGATGGTTTTTTTTTAAGATTTTGATTTGGGTTGTTTTCTATCTTGTATGATA CATTACTTACTAATATGGTTTTTCAAGTAGTAATTTTCCTCTTGCTGTTCTTCATTTCAGGGATCATGGGGATATGTCCT CGAAGAAATTTCGTCATGATAAACGTGTTTATCTCGGGGCACTTAAATTCATACCACATGCAGTTTACAAGCTCCTGGAA AATATGCCCATGCCGTGGGAGCAGGTTCTCTGCATTTTTCCAGTTCTTGTTATTTCTTCAATTTTAGCAGTGCATGTTTT CTTCCACTTATTTGATTCTCTGTGTTGTCCCATGCTAATACCATCATGAATCTGCTTTTGTGAATGTAGGTCCGAGATAT CAAGGTTTTGTACCATATTTCTGGGGCTATCACATTTGTCAATGAAATACCTTGGGTTGTGGAGCCTATTTATCTGGCTC AGGTTTGTTGTTCTCTTTTCCCTATAAAACCTGCTATACTGTGTATGATCCTTATACATCCTTTCTTACCTTAATGATTC TCAATTGATAAACTATTGTCTGTTATGCAGTGGGGTACAATGTGGATCATGATGAGAAGGGAGAAAAGGGATCGTCGTCA CTTTAAGAGGATGCGATTTCCCCCATTTGATGACGAGGAGCCTCCTCTTGACTATGCTGATAATCTTTTGGATGTTGATC CTCTAGAGCCAATTCAACTGGAGCTCGATGAAGAAGAAGATTCTGCTGTATATACTTGGTTTTATGATCACAAGCCTCTT GTTAAAACAAAGCTCATAAATGGTCCTAGTTACCGGAAATGGCATCTTTCTCTTCCTATAATGGCTACTTTGCATCGGCT CGCTGGGCAGCTTCTGTCTGATTTGATCGACCGCAATTACTTTTACTTGTTTGACATGGAGTCTTTTTTTACGGCAAAGG CTTTGAACATGTGCATACCTGGTACTTGGATTTCTTTCTTTCTATTTTTTTATGCTAAACAAACATTTGAACCTTTCTTG TTATTTATTGGGTTAGGTTTTGATCAAGTTTAAGATCACATCAAGCTAGATATTGGTAATTATAAAACTACTAGGTAACT ATGCTGATCATTAAGCATACTGAACTTTTGTTGGTTGACCTATCTGTTTCAACTTTCCTTTATGTTCATGTCCCTTGAGT TTTAGGAATTGATTTAAAATTTAATTTAAGCATGATTTTCTCAACTGTGTATGTAAAATACTGTACAAATCATCTAAAAA AATACACAGAAATATTTCAGATCTGCTTCCTTTGATTGAACTTTTGAGGCCATGGAAACTTGTGATGCATATAATATTAG GCATGTTATAACAATATGGAATTCAGAATCTTGCACTGATTTTTGTGTTTTCTCTGCTCTCCAGGTGGCCCTAAGTTTGA GCCTCTCTACCGTGACATGGAGAAGGGAGATGAGGACTGGAATGAGTTTAATGACATCAATAAGCTCATTATAAGGTCCC CACTTCGGACAGAGTACAGAATTGCTTTCCCTCATCTTTATAACAACAGGCCTCGCAAAGTAAAGCTTTGTATCTACCAT ACTCCCATGATCATGTACATAAAAACTGAAGATCCTGATCTACCTGCATTCTATTATGATCCCTTGATACACCCAATAAC CAGTGCTAACAAGGATCGACGGGAGAAGAGAATCCATGATGAGGATGATGATGATGATTGGATATTGCCAGATGGTGTGG AACCTTTACTTAAAGATACACAGCTATATACAGACACCACAGCTGCTGGAATATCCTTGCTGTTTGCTCCTCGTCCTTTT AATATGAGATCTGGTCGGATGAGGCGGGCTGAAGATATTCCTCTTGTGTCAGAATGGTATAAGGAGCATTGGTAAGTTGT ACCCTCCCTCCCTTGCATGATTTATAGATTATCTTTAATAATATATATTGGAATGCATATTTCTCTATCTTGAAAGCTAA CCAGTTCTTTTTTAATTGCCCAACAGTCCTCCATCATATCCAGTTAAAGTTCGAGTTAGTTATCAAAAGTTACTGAAGTG TTTTGTGTTGAATGAGCTGCATCATAGGCCTCCAAAGGCTCAAAAAAAGAAGCACTTATTCAGATCTCTCCAAGCAACAA AGTTTTTCCAGACCACAGAACTTGATTGGGTTGAAGCAGGTCTTCAAGTTTGTAGGCAGGGGTATAACATGTTGAATCTG TTGATCCACAGGAAGAATTTGAACTACCTTCATCTTGATTATAATTTCAATCTTAAGCCTGTGAAAACGTTGACTACTAA GGAGAGAAAGAAGTCACGATTTGGTAATGCTTTTCATCTTTGTCGTGAGATCCTACGTTTGACAAAACTTGTGGTGGATG CCAATGTTCAGTTCCGATTGGGTAATGTTGATGCTTTCCAGTTGGCAGATGGCCTCCAATATACCTTTTCACATGTTGGT CAATTGACTGGTATGTACCGATATAAGTACAGGCTTATGCGACAAATAAGAATGTGCAAGGACTTGAAACATTTGATTTA CTATCGTTTTAACACTGGGCCTGTTGGGAAGGGACCTGGCTGTGGGTTTTGGGCTCCAATGTGGAGGGTATGGTTATTCT TCCTTCGTGGTATTGTGCCCCTTCTTGAACGATGGCTAGGAAATTTGCTTGCACGTCAATTTGAAGGGCGCCACTCAAAA GGAGTGGCTAAGACAGTCACCAAGCAACGAGTTGAGAGCCACTTTGATTTAGAGCTTCGAGCAGCTGTTATGCATGATGT TCTTGATGCCATGCCAGGTAATAATTATTAAATTTAACATTATTTATGCTTTCTGTATTTGGATTTCTTTTCACTGAGTG GCTTCTGCAATTATTTCCTGTGAGATTTACTAAAGTTAAGGTTTTCTCCTTCCTTGAATGACAGAGGGTATAAAGCAGAA CAAGGCAAGAACTATATTGCAGCATTTGAGTGAGGCTTGGCGCTGCTGGAAAGCAAATATTCCTTGGAAGGTAAGCTTTT TTATTGTAATTTGTTGACTAAATTGTATTTTAAGTGAAATAGTACAGCTATAAAGTATGAACACATGGTCAGGTATGGAT AATAGCACTTCTATGATGTCTAGATTTTTGTTTATGGTTGTAGTTTTGAGCATTGTGAGGCACAATTAGCAATGGAAAAA CGTATTTCCAAAAATACGAACTGATTCATTTATTCTAGCCATTAACAGATACTTGCTCATTTTTAGTCTTACAGTAAATA TTTGGCCTCATTTGAATTTGGTTTATGCATTCCTGGCCTTATGGCTGATTCACTTGTTTTGGCAACGTGTAGGTTCCTGG TCTGCCTGTTCCCATAGAAAACATGATACTTCGATATGTGAAATCAAAAGCGGACTGGTGGACCAATGTTGCTCATTATA ATCGTGAGCGTATTAGAAGAGGTGCAACTGTGGATAAAACTGTCTGTCGTAAGAATCTCGGAAGATTGACACGCTTGTGG CTGAAGGCTGAGCAGGTGCATTTAGTGTTCTCTATGACTCATGAGTTTGTGTCTCATTATTTTTGTAGAATTATTCTTTA GCTTTTCTTATAGATGTCTTGTTTTCATGAAGTTACTTTCTGATCTTCTATCCTTGCTGTAGGAACGTCAACACAATTAT TTGAAAGATGGGCCATATGTTACCCCTGAAGAAGCTGTTGCTATATATACAACTACAGTACATTGGTTGGAATCTAGGAA GTTCTCTCCTATTCCATTTCCACCTTTATCATACAAGCATGATACGAAGTTGCTTATCCTTGCACTTGAGAGGTTGAAAG AATCTTACAGTGTTGCTGTGAGGTTGAATCAACTGCAAAGAGAAGAATTGGGGCTGATTGAGCAAGCTTATGACAATCCA CACGAGGCATTATCACGAATCAAGCGGCACCTCCTCACCCAACGTGCCTTCAAAGAAGTATGATATTATATTCAAACTTT TGTAATTTTAGGGTGTTTATTCTCATTCCTATACAAGACAAGTATAATTTTATTTCCTTTTTTGGCAGGTTGGTATAGAG TTTATGGATTTATATAGCTACTTGATTCCGGTTTATGAAATTGAGCCTCTTGAGAAGATTACCGATGCATATCTTGACCA ATATCTTTGGTATGAGGGTGACAAGCGTCATCTCTTTCCTAACTGGATCAAGCCAGCAGATTCGGAGCCACCTCCCCTAT TGGTTTACAAATGGTGTCAAGGTATAAACAATTTGCAAGGTATATGGGACACCAGTGATGGTCAATGCGTTGTTATGTTG CAGACCAAGTTTGAGAAGTTTTTTGAGAAGATTGATTTAACAATGCTTAACAGGTATGTGTTCGAGAATTGCTAAATCAC TTTCTGAATGTAATCATGACTATCTTCACCTCTAATTGTGTTTCTATTGTTGCAGGCTTCTGCGTCTGGTTCTAGACCAT AATATTGCTGATTATGTCACTGCAAAAAACAATGTTGTGTTGTCATATAAGGATATGAGTCATACAAATTCATATGGACT TATACGAGGTTTACAGTTTGCATCATTTGTTGTTCAATATTATGGACTGGTATTGGATCTTTTGCTTCTTGGACTGACTC GAGCCAGTGAGATTGCTGGTCCACCGCAGATGCCGAATGAATTCATTACTTACTGGGACACAAAAGTTGAGACTAGGCAT CCAATTAGGCTGTATTCAAGGTACATAGATCGGGTACATATATTATTTCGCTTCACCCATGAAGAGGCTCGGGACCTCAT TCAGCGATATCTCACTGAGCACCCTGATCCTAACAATGAGAACATGGTGGGGTACAATAATAAGAAGTGCTGGCCAAGAG ATGCAAGAATGAGGCTCATGAAACATGATGGTATTTGTTTCTCCTTTTGCCTTGTGTAGGTTTTGCATTTTGACTTTTTA TTTGACTCGTTCTTAATGTTTTGTTTGACAATTCACTTCGTTGTAATTTCAGTCAATCTTGGAAGGAGTGTCTTTTGGGA TATGAAGAATCGTCTTCCTCGAAGCATTACAACTTTGGAGTGGGAGAACAGCTTTGTTTCTGTTTACAGCAAGGATAATC CAAACTTGCTATTTAGCATGTAAGTAATGATTATTTTAAGCAATTGATCTTTGTGTTCCTCCCCCCCCCCTGCTGTGAAA TGTGAAAAAGGTTATGTTTTCAAATTTTTCGCTTTGCATCGAAGTCTTTCAGAATTTTAGACTGCCTTGGTTGTCTTGCT TGACATATTGATTGAAAATGTAGTTTTTTATCTCTTCAGTTTCCTTCTGTATATATCCACATCTTCCCCAAAAGTATCCT CTCTACCAAATTGTCATTACTGACTCCCAAGTTGTTTTCCTTTTTGTGGAATCTTCCTTTAGTGTGTGTATAACGATGAA TTAAGCTCTCTTTGCTGACATCTTTCAATGGCCTACAGGTGTGGGTTTGAAGTGAGGATACTTCCGAAAATTCGTATGAC TCAAGAAGCATTCAGTAACACAAGAGATGGAGTCTGGAATCTCCAGAATGAACAAACTAAAGAAAGGACAGCTGTCGCTT TCTTAAGAGTTGATGATGAACATATGAAAGTGTTTGAGAACCGTGTGAGGCAGATTCTTATGTCTTCGGGGTCTACTACG TTCACAAAAATTGTCAACAAGTGGAATACAGCTTTAATAGGTATGTGAAGTTGCATTGTATGAACATTTGCAGAGGTTAT CATTAGTTTTCTCATTGAACTTTGTTATTTGTTTTTATTAGGACTCATGACTTACTTCAGAGAGGCAACTGTACATACTC AAGAACTGTTGGATTTGCTTGTTAAATGTGAGAATAAGATTCAGACCCGTATTAAGATTGGGCTCAACTCAAAGATGCCT AGCAGGTAAATGATCAGATACTTTTTACTACTTCGTTTGAAGCTTTGAAATTTTAATTGAATATATCCATGCTACTGTCT CTTTTATCAGGTTTCCACCTGTCATTTTCTACACCCCGAAAGAAATTGGAGGGCTCGGAATGTTGTCTATGGGTCACATC TTGATTCCACAAAGTGATCTCCGATACAGTCAGCAGACTGATGTTGGTGTAACCCACTTCAGGAGTGGGATGAGCCATGA GGAGGATCAGCTGATTCCCAACCTTTATCGATACATCCAGGTGAACCTCAATTCTCTCCCCATTATATGTAATAGATGAC ATTTCCTATTAAAAATGTAATAGTTGACATGCATTTGTGCTCAAATATGATGTCTGTTGATTCATATAGACTCCTGTGTA GATTCATATATATATATATTCATATGTAGTTCATCTTATTTTTATTATTATTCATGCAGCCTTGGGAGAGTGAGTTCATT GATTCACAGCGTGTCTGGGCTGAATATGCATTGAAAAGGCAGGAAGCATCAGCGCAAAACAGGCGTTTGACCCTTGAAGA TCTGGAAGTGAGTGTTCTGAGATCCCTCTTAATGATCTGGACATTAGGATTTCGGTGTTCATGTGAATAGTATTGATGGC AATGTGCTTGTTTTTCCTTAGAGGGTAATTTACTTGCTGACTTATTCTTGATTTATTTTGCAGGACTCGTGGGATAGAGG AATACCACGTATTAACACTTTGTTTCAGAAAGATAGACACACTTTGGCTTATGATAAAGGATGGAGGGTGCGTACAGACT TCAAGCAGTACCAAGTTCTGAAACAAAATCCGTTCTGGTGGACTCACCAAAGGCATGATGGGAAGTTGTGGAACTTGAAC AATTACCGAACTGATGTTATTCAAGCCCTTGGAGGAGTTGAAGGAATTCTTGAACACACATTATTCAAAGGAACATAGTG AGTCTTATTTTCCTTTGAACTTGCATTGCTGTTTGAGTTGGGGGTGTGCTTTCTCATGCTTAACCATTGTGCCAATTAGA AAAGAATCCTGAGTTTATCCGCTTATTTTTATACATCCTTTTATTAAGAGGAGTATGATATGGACATAGGAACACACCAA ATTTTAGAAATTATAGTACAAAGGCACGTGCACTGACACAAAATAAAAAACATTCACATTTCATGAGTCATAATGTCATC TATGAGCTTTATTATTTACAATATCCTAAAAAATGAAATTGGCACGTGATAGAAGCACATCTGTCTTAATTTAATCATTT GGTTCAGTATTTAGCTCTTGCTATTTGCGTCTATTTTATAGAAGTTGTGATTGACCCACTGTTGTTTTTCACTGTTAGTT TTCCAACTTGGGAAGGTCTCTTCTGGGAAAAGGCATCAGGCTTTGAGGAATCTATGAAGTATAAGAAGCTCACCAATGCT CAGAGATCTGGTCTCAACCAGATACCCAACCGTAGATTTACACTTTGGTGGTCACCTACTATTAATCGAGCCAATGTTTA TGTGGGTTTCCAAGTGCAGCTAGATCTTACTGGTATTTTCATGCATGGGAAAATACCAACTTTGAAGATATCTCTTATTC AGATATTCAGAGCTCACTTGTGGCAGAAGATCCATGAGAGTGTTGTCATGGATCTTTGTCAGGTTTTGGATCAAGAGTTG GATGCTCTGGAGATTGAAACTGTTCAGAAGGAAACAATTCATCCTAGGAAAAGTTACAAAATGAACAGTTCTTGTGCAGA CATTCTTCTCTTTGCTGCGCATAGATGGCCAATGTCAAAGCCTAGTCTTGTCGCTGAATCTAAGGATGTTTTTGATCAGA AGGCAAGCAATAAGTACTGGATTGATGTTCAGCTTCGATGGGGTGATTATGACTCTCATGATATTGAGCGTTACACTCGA GCCAAATTTATGGACTACACAACAGATAATATGTCAATATATCCGTCTCCTACTGGTGCGTGTCTATCATTTTCCTTTGC TCCTTCACATGTTTTAATATTTATTGTTCACTTGATTGTTTTTTCCATGCAGGGGTGATGATTGGTCTCGACTTGGCGTA CAACTTACATTCTGCTTTTGGGAACTGGTTCCCTGGGTCAAAGCCACTGCTTCAGCAAGCCATGAATAAGATCATGAAGG TAAACAAACATCATATATCTGAAGTCTTACAAATTATGAATCATTTGGGGTACATGGAATTCTTTTATTTGGGGATAAAT ATTGTTCCTCTGACTGGTTTCAACTTTCAACCTATACTTACACATCTTATTTACACCATCTCCACTTAGCTCTTGTGGCT GAAGTGTTTGTTTCATTGATTATCTAACACAGTTCTTTTACTTATGATGTTGTGTATATGCAGTCAAATCCTGCGTTGTA TGTTTTGAGGGAACGTATAAGGAAAGGTTTGCAGCTGTACTCTTCTGAGCCGACTGAACCATATTTGTCTTCCCAAAACT ATGGAGAGATATTCAGCAACCAAATTATTTGGTTTGTTGATGACACTAATGTGTATCGTGTTACAATTCACAAGACTTTT GAAGGAAATCTTACAACAAAACCCATCAATGGTGCCATATTTATTTTCAACCCAAGGACTGGACAGTTGTTTCTTAAGGT TTGTGTTCATGCTCTTGTTCTTATTGTGATGTTTCTAGTGTTAGTTATCTGGCTGTTGATCAATATCATACTTTGTAGGT TATTCATACAAGTGTCTGGGCTGGTCAGAAGCGTCTTGGCCAGTTGGCCAAGTGGAAAACAGCTGAAGAAGTTGCTGCTC TAGTAAGGTCTTTGCCTGTAGAAGAACAGCCAAAGCAGATTATTGTCACTCGTAAAGGCATGTTGGATCCATTGGAGGTT CACTTGCTGGATTTCCCCAACATTGTTATCAAAGGAAGTGAGCTGCAGCTTCCTTTCCAGGCATGTTTGAAAATTGAGAA ATTTGGGGATCTTATTTTGAAGGCCACGGAGCCACAAATGGTCTTGTTCAACATTTATGATGACTGGCTGAAGAGTATTT CATCATACACTGCATTCTCTAGACTGATTCTGATTCTCCGAGCTCTTCATGTAAATAATGAAAAGGCAAAGATGTTACTG AAGCCTGACAAAACTATCATCACCGAGCCTCATCACATCTGGCCTTCTCTAAGTGATGACCAGTGGATGAAGGTAAAAGT TTAATGTGCAATTTTTACCTGTCTTTCGTTGGTTAAATGTTTACATTTTTTAACAGTGTGCTACACCGTCAAGATTGACT TTTATTTGTTTGTTGAGTTATATTTTGTTCTCATGTAACCTAAACATGATGCATTGTGACAGGTGGAGGTTGCATTAAGA GATCTTATACTTTCAGATTATGCCAAGAAAAACAATGTGAACACTTCAGCTCTGACTCAGTCTGAGATTCGTGATATTAT TCTTGGAGCTGAAATTACTCCACCTTCACAACAGCGGCAACAGATTGCAGAGATTGAGCAACAGGTCATTTTTTTTTTCC TTCCTGGACACATTCAACACTTCGCCCTCCAATCTATCCTGCCGTCTCTTGCTTGAGTTATTTACTCATTCTGTTCTGTA TTTTCTATTTTGTAGGCTCATGAAGCTAATCAGGCGACAGCTGTAACAACAAAGACCACAAATGTTCATGGTGAAGAACT TATAGTAACTACCACCAGTCCCTATGAGCAAGCTGCATTTGGTTCTAAGACTGACTGGCGTGTCAGAGCAATATCCGCCA CTAATTTATACCTTCGTGTAAACCATATATATGTGAATTCCGAGGATATAAAGGTTTGAACTATTTTTCTTCATTCCTCC CTCGTTTACACTTCTAGAACTTCTGTCATATGCTAATGTTGGATTTTGTGGTGCAGGAAACCGGCTACACCTATATTATG CCAAAGAACATTTTGAAGAAGTTCATTTGCATAGCAGATCTTCGAACACAAATTGCTGGGTACTTGTATGGCATAAGTCC TCCGGACAATCCTCAGGTGAAGGAAATTCGCTGCATTGTGATGACACCACAATATGGGACTCATCAACAAGTCCATCTCC CATCAGCTCTTCCAGAGCATGATTTCTTGAATGATTTGGAGCCCTTGGGATGGATGCATACTCAACCAAATGAGCTTCCC CAGTTGTCGCCTCAGGTTTGCTTGCATTAGCTTACTTATATTTTTCTTTTGTTTTTAATTAATTTCAATTAACACGACAT GGTGACGATTTTTTGAAAGTAAAATAAAAAAATTAGATTGTTGTTTTACTTATCAGGGAAATATATTTATGATTCATGGT ATACATTGTCTCACTTGAGGAATGATTATTGCAGGATCTCACTTCACATGCTAAGATCCTAGAGAACAATAAGCAATGGG ATGGGGAGAAATGTATTATCTTGACTTGTAGCTTTACTCCTGGTTCCTGTTCTTTAACCGCGTACAAACTCACTCCATCT GGTTATGAATGGGGCCGTATCAACAAGGATACAGGAAGCAATCCTCATGGTTACCTTCCCACTCATTATGAAAAGGTTCA GATGCTCCTCAGTGATCGCTTCCTTGGTTTCTACATGGTACGTTTTCCGACCTCCTCAAGTTATCTATTTTCTTCTTTGA ATATGATTGGGTGATGGTTTATATATTTATATTGATGTCTTATGTAAAAATATATTAAAATTGTGCCTTTTAACCTTTTT ACTTATTATTGCTACAATCTGTTATTTTTATTTTATTTTTTGCATTGTTTGACTGATGGTTCTGTGGCTAAAATCTGCAG ATTCCTGATAATGGTCCATGGAATTACAACTTCATGGGGGTGAGACACGCACCATCGATGAAGTATGGAGTGAAACTTGG GACACCTAGGGAGTACTACAACGAGGACCATAGACCCACCCATTTCTTAGAGTTCAGCAACATGGAGGAAAAAGGGGAAA CAGTTGTTGAGGGTGATCGTGAGGATACATTCTCTTGA
CDS sequence (LotjaGi3g1v0008200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTCGAAGAAATTTCGTCATGATAAACGTGTTTATCTCGGGGCACTTAAATTCATACCACATGCAGTTTACAAGCT CCTGGAAAATATGCCCATGCCGTGGGAGCAGGTCCGAGATATCAAGGTTTTGTACCATATTTCTGGGGCTATCACATTTG TCAATGAAATACCTTGGGTTGTGGAGCCTATTTATCTGGCTCAGTGGGGTACAATGTGGATCATGATGAGAAGGGAGAAA AGGGATCGTCGTCACTTTAAGAGGATGCGATTTCCCCCATTTGATGACGAGGAGCCTCCTCTTGACTATGCTGATAATCT TTTGGATGTTGATCCTCTAGAGCCAATTCAACTGGAGCTCGATGAAGAAGAAGATTCTGCTGTATATACTTGGTTTTATG ATCACAAGCCTCTTGTTAAAACAAAGCTCATAAATGGTCCTAGTTACCGGAAATGGCATCTTTCTCTTCCTATAATGGCT ACTTTGCATCGGCTCGCTGGGCAGCTTCTGTCTGATTTGATCGACCGCAATTACTTTTACTTGTTTGACATGGAGTCTTT TTTTACGGCAAAGGCTTTGAACATGTGCATACCTGGTGGCCCTAAGTTTGAGCCTCTCTACCGTGACATGGAGAAGGGAG ATGAGGACTGGAATGAGTTTAATGACATCAATAAGCTCATTATAAGGTCCCCACTTCGGACAGAGTACAGAATTGCTTTC CCTCATCTTTATAACAACAGGCCTCGCAAAGTAAAGCTTTGTATCTACCATACTCCCATGATCATGTACATAAAAACTGA AGATCCTGATCTACCTGCATTCTATTATGATCCCTTGATACACCCAATAACCAGTGCTAACAAGGATCGACGGGAGAAGA GAATCCATGATGAGGATGATGATGATGATTGGATATTGCCAGATGGTGTGGAACCTTTACTTAAAGATACACAGCTATAT ACAGACACCACAGCTGCTGGAATATCCTTGCTGTTTGCTCCTCGTCCTTTTAATATGAGATCTGGTCGGATGAGGCGGGC TGAAGATATTCCTCTTGTGTCAGAATGGTATAAGGAGCATTGTCCTCCATCATATCCAGTTAAAGTTCGAGTTAGTTATC AAAAGTTACTGAAGTGTTTTGTGTTGAATGAGCTGCATCATAGGCCTCCAAAGGCTCAAAAAAAGAAGCACTTATTCAGA TCTCTCCAAGCAACAAAGTTTTTCCAGACCACAGAACTTGATTGGGTTGAAGCAGGTCTTCAAGTTTGTAGGCAGGGGTA TAACATGTTGAATCTGTTGATCCACAGGAAGAATTTGAACTACCTTCATCTTGATTATAATTTCAATCTTAAGCCTGTGA AAACGTTGACTACTAAGGAGAGAAAGAAGTCACGATTTGGTAATGCTTTTCATCTTTGTCGTGAGATCCTACGTTTGACA AAACTTGTGGTGGATGCCAATGTTCAGTTCCGATTGGGTAATGTTGATGCTTTCCAGTTGGCAGATGGCCTCCAATATAC CTTTTCACATGTTGGTCAATTGACTGGTATGTACCGATATAAGTACAGGCTTATGCGACAAATAAGAATGTGCAAGGACT TGAAACATTTGATTTACTATCGTTTTAACACTGGGCCTGTTGGGAAGGGACCTGGCTGTGGGTTTTGGGCTCCAATGTGG AGGGTATGGTTATTCTTCCTTCGTGGTATTGTGCCCCTTCTTGAACGATGGCTAGGAAATTTGCTTGCACGTCAATTTGA AGGGCGCCACTCAAAAGGAGTGGCTAAGACAGTCACCAAGCAACGAGTTGAGAGCCACTTTGATTTAGAGCTTCGAGCAG CTGTTATGCATGATGTTCTTGATGCCATGCCAGAGGGTATAAAGCAGAACAAGGCAAGAACTATATTGCAGCATTTGAGT GAGGCTTGGCGCTGCTGGAAAGCAAATATTCCTTGGAAGGTTCCTGGTCTGCCTGTTCCCATAGAAAACATGATACTTCG ATATGTGAAATCAAAAGCGGACTGGTGGACCAATGTTGCTCATTATAATCGTGAGCGTATTAGAAGAGGTGCAACTGTGG ATAAAACTGTCTGTCGTAAGAATCTCGGAAGATTGACACGCTTGTGGCTGAAGGCTGAGCAGGAACGTCAACACAATTAT TTGAAAGATGGGCCATATGTTACCCCTGAAGAAGCTGTTGCTATATATACAACTACAGTACATTGGTTGGAATCTAGGAA GTTCTCTCCTATTCCATTTCCACCTTTATCATACAAGCATGATACGAAGTTGCTTATCCTTGCACTTGAGAGGTTGAAAG AATCTTACAGTGTTGCTGTGAGGTTGAATCAACTGCAAAGAGAAGAATTGGGGCTGATTGAGCAAGCTTATGACAATCCA CACGAGGCATTATCACGAATCAAGCGGCACCTCCTCACCCAACGTGCCTTCAAAGAAGTTGGTATAGAGTTTATGGATTT ATATAGCTACTTGATTCCGGTTTATGAAATTGAGCCTCTTGAGAAGATTACCGATGCATATCTTGACCAATATCTTTGGT ATGAGGGTGACAAGCGTCATCTCTTTCCTAACTGGATCAAGCCAGCAGATTCGGAGCCACCTCCCCTATTGGTTTACAAA TGGTGTCAAGGTATAAACAATTTGCAAGGTATATGGGACACCAGTGATGGTCAATGCGTTGTTATGTTGCAGACCAAGTT TGAGAAGTTTTTTGAGAAGATTGATTTAACAATGCTTAACAGGCTTCTGCGTCTGGTTCTAGACCATAATATTGCTGATT ATGTCACTGCAAAAAACAATGTTGTGTTGTCATATAAGGATATGAGTCATACAAATTCATATGGACTTATACGAGGTTTA CAGTTTGCATCATTTGTTGTTCAATATTATGGACTGGTATTGGATCTTTTGCTTCTTGGACTGACTCGAGCCAGTGAGAT TGCTGGTCCACCGCAGATGCCGAATGAATTCATTACTTACTGGGACACAAAAGTTGAGACTAGGCATCCAATTAGGCTGT ATTCAAGGTACATAGATCGGGTACATATATTATTTCGCTTCACCCATGAAGAGGCTCGGGACCTCATTCAGCGATATCTC ACTGAGCACCCTGATCCTAACAATGAGAACATGGTGGGGTACAATAATAAGAAGTGCTGGCCAAGAGATGCAAGAATGAG GCTCATGAAACATGATGTCAATCTTGGAAGGAGTGTCTTTTGGGATATGAAGAATCGTCTTCCTCGAAGCATTACAACTT TGGAGTGGGAGAACAGCTTTGTTTCTGTTTACAGCAAGGATAATCCAAACTTGCTATTTAGCATGTGTGGGTTTGAAGTG AGGATACTTCCGAAAATTCGTATGACTCAAGAAGCATTCAGTAACACAAGAGATGGAGTCTGGAATCTCCAGAATGAACA AACTAAAGAAAGGACAGCTGTCGCTTTCTTAAGAGTTGATGATGAACATATGAAAGTGTTTGAGAACCGTGTGAGGCAGA TTCTTATGTCTTCGGGGTCTACTACGTTCACAAAAATTGTCAACAAGTGGAATACAGCTTTAATAGGACTCATGACTTAC TTCAGAGAGGCAACTGTACATACTCAAGAACTGTTGGATTTGCTTGTTAAATGTGAGAATAAGATTCAGACCCGTATTAA GATTGGGCTCAACTCAAAGATGCCTAGCAGGTTTCCACCTGTCATTTTCTACACCCCGAAAGAAATTGGAGGGCTCGGAA TGTTGTCTATGGGTCACATCTTGATTCCACAAAGTGATCTCCGATACAGTCAGCAGACTGATGTTGGTGTAACCCACTTC AGGAGTGGGATGAGCCATGAGGAGGATCAGCTGATTCCCAACCTTTATCGATACATCCAGCCTTGGGAGAGTGAGTTCAT TGATTCACAGCGTGTCTGGGCTGAATATGCATTGAAAAGGCAGGAAGCATCAGCGCAAAACAGGCGTTTGACCCTTGAAG ATCTGGAAGACTCGTGGGATAGAGGAATACCACGTATTAACACTTTGTTTCAGAAAGATAGACACACTTTGGCTTATGAT AAAGGATGGAGGGTGCGTACAGACTTCAAGCAGTACCAAGTTCTGAAACAAAATCCGTTCTGGTGGACTCACCAAAGGCA TGATGGGAAGTTGTGGAACTTGAACAATTACCGAACTGATGTTATTCAAGCCCTTGGAGGAGTTGAAGGAATTCTTGAAC ACACATTATTCAAAGGAACATATTTTCCAACTTGGGAAGGTCTCTTCTGGGAAAAGGCATCAGGCTTTGAGGAATCTATG AAGTATAAGAAGCTCACCAATGCTCAGAGATCTGGTCTCAACCAGATACCCAACCGTAGATTTACACTTTGGTGGTCACC TACTATTAATCGAGCCAATGTTTATGTGGGTTTCCAAATATTCAGAGCTCACTTGTGGCAGAAGATCCATGAGAGTGTTG TCATGGATCTTTGTCAGGTTTTGGATCAAGAGTTGGATGCTCTGGAGATTGAAACTGTTCAGAAGGAAACAATTCATCCT AGGAAAAGTTACAAAATGAACAGTTCTTGTGCAGACATTCTTCTCTTTGCTGCGCATAGATGGCCAATGTCAAAGCCTAG TCTTGTCGCTGAATCTAAGGATGTTTTTGATCAGAAGGCAAGCAATAAGTACTGGATTGATGTTCAGCTTCGATGGGGTG ATTATGACTCTCATGATATTGAGCGTTACACTCGAGCCAAATTTATGGACTACACAACAGATAATATGTCAATATATCCG TCTCCTACTGGGGTGATGATTGGTCTCGACTTGGCGTACAACTTACATTCTGCTTTTGGGAACTGGTTCCCTGGGTCAAA GCCACTGCTTCAGCAAGCCATGAATAAGATCATGAAGTCAAATCCTGCGTTGTATGTTTTGAGGGAACGTATAAGGAAAG GTTTGCAGCTGTACTCTTCTGAGCCGACTGAACCATATTTGTCTTCCCAAAACTATGGAGAGATATTCAGCAACCAAATT ATTTGGTTTGTTGATGACACTAATGTGTATCGTGTTACAATTCACAAGACTTTTGAAGGAAATCTTACAACAAAACCCAT CAATGGTGCCATATTTATTTTCAACCCAAGGACTGGACAGTTGTTTCTTAAGGTTATTCATACAAGTGTCTGGGCTGGTC AGAAGCGTCTTGGCCAGTTGGCCAAGTGGAAAACAGCTGAAGAAGTTGCTGCTCTAGTAAGGTCTTTGCCTGTAGAAGAA CAGCCAAAGCAGATTATTGTCACTCGTAAAGGCATGTTGGATCCATTGGAGGTTCACTTGCTGGATTTCCCCAACATTGT TATCAAAGGAAGTGAGCTGCAGCTTCCTTTCCAGGCATGTTTGAAAATTGAGAAATTTGGGGATCTTATTTTGAAGGCCA CGGAGCCACAAATGGTCTTGTTCAACATTTATGATGACTGGCTGAAGAGTATTTCATCATACACTGCATTCTCTAGACTG ATTCTGATTCTCCGAGCTCTTCATGTAAATAATGAAAAGGCAAAGATGTTACTGAAGCCTGACAAAACTATCATCACCGA GCCTCATCACATCTGGCCTTCTCTAAGTGATGACCAGTGGATGAAGGTGGAGGTTGCATTAAGAGATCTTATACTTTCAG ATTATGCCAAGAAAAACAATGTGAACACTTCAGCTCTGACTCAGTCTGAGATTCGTGATATTATTCTTGGAGCTGAAATT ACTCCACCTTCACAACAGCGGCAACAGATTGCAGAGATTGAGCAACAGGCTCATGAAGCTAATCAGGCGACAGCTGTAAC AACAAAGACCACAAATGTTCATGGTGAAGAACTTATAGTAACTACCACCAGTCCCTATGAGCAAGCTGCATTTGGTTCTA AGACTGACTGGCGTGTCAGAGCAATATCCGCCACTAATTTATACCTTCGTGTAAACCATATATATGTGAATTCCGAGGAT ATAAAGGAAACCGGCTACACCTATATTATGCCAAAGAACATTTTGAAGAAGTTCATTTGCATAGCAGATCTTCGAACACA AATTGCTGGGTACTTGTATGGCATAAGTCCTCCGGACAATCCTCAGGTGAAGGAAATTCGCTGCATTGTGATGACACCAC AATATGGGACTCATCAACAAGTCCATCTCCCATCAGCTCTTCCAGAGCATGATTTCTTGAATGATTTGGAGCCCTTGGGA TGGATGCATACTCAACCAAATGAGCTTCCCCAGTTGTCGCCTCAGGATCTCACTTCACATGCTAAGATCCTAGAGAACAA TAAGCAATGGGATGGGGAGAAATGTATTATCTTGACTTGTAGCTTTACTCCTGGTTCCTGTTCTTTAACCGCGTACAAAC TCACTCCATCTGGTTATGAATGGGGCCGTATCAACAAGGATACAGGAAGCAATCCTCATGGTTACCTTCCCACTCATTAT GAAAAGGTTCAGATGCTCCTCAGTGATCGCTTCCTTGGTTTCTACATGATTCCTGATAATGGTCCATGGAATTACAACTT CATGGGGGTGAGACACGCACCATCGATGAAGTATGGAGTGAAACTTGGGACACCTAGGGAGTACTACAACGAGGACCATA GACCCACCCATTTCTTAGAGTTCAGCAACATGGAGGAAAAAGGGGAAACAGTTGTTGAGGGTGATCGTGAGGATACATTC TCTTGA
Protein sequence (LotjaGi3g1v0008200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSKKFRHDKRVYLGALKFIPHAVYKLLENMPMPWEQVRDIKVLYHISGAITFVNEIPWVVEPIYLAQWGTMWIMMRREK RDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVYTWFYDHKPLVKTKLINGPSYRKWHLSLPIMA TLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAF PHLYNNRPRKVKLCIYHTPMIMYIKTEDPDLPAFYYDPLIHPITSANKDRREKRIHDEDDDDDWILPDGVEPLLKDTQLY TDTTAAGISLLFAPRPFNMRSGRMRRAEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKCFVLNELHHRPPKAQKKKHLFR SLQATKFFQTTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLT KLVVDANVQFRLGNVDAFQLADGLQYTFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMW RVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLS EAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNY LKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNP HEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYK WCQGINNLQGIWDTSDGQCVVMLQTKFEKFFEKIDLTMLNRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGL QFASFVVQYYGLVLDLLLLGLTRASEIAGPPQMPNEFITYWDTKVETRHPIRLYSRYIDRVHILFRFTHEEARDLIQRYL TEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDNPNLLFSMCGFEV RILPKIRMTQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTY FREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSQQTDVGVTHF RSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEASAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYD KGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESM KYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHP RKSYKMNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYP SPTGVMIGLDLAYNLHSAFGNWFPGSKPLLQQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQI IWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEE QPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRL ILILRALHVNNEKAKMLLKPDKTIITEPHHIWPSLSDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEI TPPSQQRQQIAEIEQQAHEANQATAVTTKTTNVHGEELIVTTTSPYEQAAFGSKTDWRVRAISATNLYLRVNHIYVNSED IKETGYTYIMPKNILKKFICIADLRTQIAGYLYGISPPDNPQVKEIRCIVMTPQYGTHQQVHLPSALPEHDFLNDLEPLG WMHTQPNELPQLSPQDLTSHAKILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRINKDTGSNPHGYLPTHY EKVQMLLSDRFLGFYMIPDNGPWNYNFMGVRHAPSMKYGVKLGTPREYYNEDHRPTHFLEFSNMEEKGETVVEGDREDTF S
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 134 | 134 | 6.5E-74 | ||
| PANTHER | 1 | 2241 | 2241 | 0.0 | – | |
| PANTHER | 1 | 2241 | 2241 | 0.0 | ||
| Pfam | 322 | 727 | 406 | 1.2E-236 | ||
| Pfam | 912 | 1002 | 91 | 8.3E-47 | ||
| SUPERFAMILY | 923 | 1180 | 258 | 5.31E-91 | ||
| Gene3D | 1110 | 1230 | 121 | 2.0E-62 | ||
| Pfam | 1137 | 1270 | 134 | 7.0E-73 | ||
| Coils | 1318 | 1338 | 21 | - | – | |
| Pfam | 1369 | 1479 | 111 | 2.7E-57 | ||
| Gene3D | 1485 | 1656 | 172 | 4.8E-95 | – | |
| Pfam | 1664 | 1893 | 230 | 1.0E-129 | ||
| Gene3D | 1665 | 1825 | 161 | 1.7E-94 | ||
| SUPERFAMILY | 1667 | 1919 | 253 | 1.25E-123 | ||
| CDD | 1670 | 1920 | 251 | 0.0 | ||
| Gene3D | 1826 | 1924 | 99 | 1.3E-49 | ||
| Gene3D | 1962 | 2241 | 280 | 9.8E-139 | – | |
| CDD | 1971 | 2221 | 251 | 5.58105E-169 | – | |
| SMART | 2003 | 2137 | 135 | 1.4E-24 | ||
| Pfam | 2005 | 2103 | 99 | 6.2E-7 | ||
| ProSiteProfiles | 2007 | 2138 | 132 | 19.976 | ||
| Pfam | 2116 | 2238 | 123 | 9.5E-51 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | MRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Spliceosomal complex | Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA. | ||
| Molecular function | U6 snRNA binding | Interacting selectively and non-covalently with the U6 small nuclear RNA (U6 snRNA). | ||
| Molecular function | U5 snRNA binding | Interacting selectively and non-covalently with the U5 small nuclear RNA (U5 snRNA). |
Expression pattern of LotjaGi3g1v0008200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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