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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0293400 |
Transcript ID | LotjaGi5g1v0293400.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|V7BF38|V7BF38_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0293400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61088752..61096822) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAAAGATATTCTGTTATAGTAACTTTAACATGATCAAAACTCTCTCAAAAAGTACAACTCATAGCAACCAAGCTCT CAACCTTACCCGTTCAAACAACTATCTTTTGACACATCATGTCTTTCGGGTCCAATCCAATTTGATCTTTTTCACTTCTA GTTTCAGGAGAATTTATTTATGCTTTTCCTCATTACCTCATATAAAATCATTTTTAATTTAATTTTAATTATTTTCTTCA TGTGTTCTTCTTTTTGACTAGTTGTACTTTTTACACGCTCCGATTCTCTCTCTCTAAACTCTGTTTCTCCCTCCTCTGTC TGCTCCCATCACCCGCTTCGGCGACACCGCCGGAACTCGTACTCGTTGCCGGAATTTCTCTCCCGCCGCCGCAAACCGCC TCCTTCTCACACTTCCAATCAAACCGCTTCAACCGGGTTTCCTTTCGTTTCTCTCCCTAGTCCAAGTCGCTGCATGAGTT GAAGAATCAACGAGTTTGACTTGGAATTGTCAATGGGGTTACTGGGTTTCTAGTTTCTTTGCATAGGAACAGATCCACGA AGGTTTTTCGCATTCTAGAGCGAGAATAAGAAGTGGGTTTTGATTTTCAGAGAGAGAGATTGAGGTTGAGGTTTATCATG TACGGAGCTCTGAACAGCGATCGCAGAGGGTGGTGGAGTTCCGGTGAATCTTTCACCTGGAATGGCAGATCTTGTTAGCC ACAGGAATGCCGACCGTGACATCGACCAGGTGAGTTACTAGTTCAATGTGAAAGTTCAACGTTGTGATTTTTCAGTCAAA TTTTGTTGCTATGTTTCGGTTTACGGTCAAACATGGGAACTGGTTTTATTGTTGAAGGTGTTTTTTTTTTCTTATTTGGT GGCTAGGAATGTTATGATCATATGATCAAGTTGTTTTGTGTGTCTACTTGTTTGAACTGATTGGGAAATTTGAGGGAAGT GAGAAGCTGAGAATATAGTGAAGACATAGCGTGTGAATTTATGTATTGCGGCGTCTATGTTGTTTTGGGATGCCAAAATT AGGATGAAAATTTTGATGGGTTTTTGGCCCTAAATGGTGTGGTTGATTTAAAGGAATTGTTCCTTTATCAGCTGTGTTGG AATGGTGTGTCTTGAAAAGGAAAGATATGGCCGGCACCCTTGGGGCCGTGATATGGTTTGACTGACTTGAATTAAATTGT TAAAAGGTAAGTGCTAACTCTGTATGAGGGTAGATAAACTTTTGATGCCATCTTTTAATGATAACATTGTGAAGGGCAGC TCCTTATGAAAATGTCTTGGATCATTTGATTCGTGATGTTGTACCTTAAATCAGTTTTCTTGTAATGGCTGTACTAAGTA ATAACTAGATGGAGTGATGTCTGAAGTAGCATTTGGATAATGAAATGGAGCCTACAATAATGTTGATTACTTGAAGAATA ATAGTTATGTCCCTAGAAATATCTGTCCTGTAAAACAATTTTCAGCCATCTATTTTGGTGAAAATATTAAGTGGAAAACA GATTCGTCCAGAAGAAACTGAATGTTGTGAAATTACAGGAATTCTTATGAAACTTTACAAAATTTGTGTTATAATATGGC TTAAATCATGGTTATATTTCATTACTCCCGGTCCAGGCCAGCTATATATCTTACATAAATAATTGTTTGTCTGTTTAATC TTTCATTTGGTTTACCATGTTACCTTTTCATTGTGCAGGCATTGATTGCTTTGAAAAAGGGTGCTCAACTGCTTAAATAT GGTCGTAAGGGAAAGCCTAAGTTTTGCCCATTTAGACTTTCCAGTGTAAGTTACATAAAATCCTTTTCAGGGAAGTGTAT GTGGATTCTCTATATCGCTTGCTAATTATCATTGTGGTTGGACAGTACACAACTCATTATATTCTCAATTTCAATTAATC TGTGATAGATAGGTACTTCCACATGTTAGTTGATGTTATATGAATCACATAATAGGAAAGGACATTTGAATTGTATTTTC TATACTTTTATCTGCTCTTTTATTACACGTTAACGCTATTTTTAGGTGTCTTGCTCAGGAGAAATGTACTGATTGAAACC ATTAAAAAGACCTAGTTTTAAATGGTTTTGTTGAAAACTGGTTTATGACAATGTTAAAGTTATAGTGGTACTAATGATAT CAAATGCAATTGACGTAAGATTTCTGTGAGTAGACCTTACAGGGCACCATTCAATTCTTCTATAAGATTGATGTCTGTCA TACACTCCTACTGTTTATCTTTTTTGTTTCCATATCCTTAATTTCATTAGCTAGGAGTGATTATTAAGGCTCTGTTTGCG AATCAGTACTGTACAACGCCATGTTAATGGAAAAAATATTTGCTTTGACGTTTTTGATCTTGGAAATTTGAATCCTACTT TCTGAGACATATTAAATGGATGTTTTGCTTAAAACAAACATACTCTAAGTTGTGATCTCTAGCTAACTTAATGTGTTGGT TGTAGATCCTGCTCCTAGTCTTTTAGTGCCCATTTTCTGTCTTTCCTTCTTTTGATGGTGCAGTCTATCCTTGTTTACTG CATTTGACAGTCATGTATTTCTAACTGTACTCATTATAATCTCCATAAACCACAGGATGAATTGTCTTTAATCTGGATTT CAAGTAGTGGAGAAAAAAGTCTGAAGCTATCTTCGATCTCAAGAATTATTCCTGGACAAAGAACTGTGAGAATTCTACCC TATTACTTTATATCATTCTAACGCCTGAGAGTTCTTTGTGATTAGCTAAGTGATTTTTAAGAATTGTTCTATAAATGTTT CTTCTCTGTTATTTGATTGTTTTTCTTATCTTCTGGCAGGCTGTTTTCCAACGATATCTGCGTCCTGAGAAGGACTATTT GTCCTTTTCACTTATTTATAACCACGGGAAGCGATCCCTTGATTTGGTTGGTGCTCAGCTCTGAAATTCCATGGAAAACT ACACCATCTTTTATTTCTATTTTCTGCATTTTCCATTCTAACGAATAATTTTTCTTGTTGTGTTTCAGATTTGCAAGGAT AAGGTTCAGGCAGAATTGTGGATTACTGGTCTCAAGGCACTGATTTCTTCTGGTCAAGGTGGGCGTTCCAAAATAGATGG ATGGAGTGATGGAGGCCTATGTCTTGATGTAAAATTCCTACTTGTTGTCTTGTCTATGTAATTATTTCATCATTTTCCTT GAAATAAATGTTTTGGTGAATCTCAACAGGGAGAACTTATTGATTTTCTGCTTCATCAGAAAACTAGTTATTGTTTCCTT TGAGGGAAAAATAATCTTTATGTAATGGATTTGCATGACTTATCTTGAAAAACATTTATACTATAGTTTTTTGAAACAAC AGTTTAGGAATAGTTGCTTTTGGCATTTGCCTATTTTAGTTTTTCTGTGCTGATTTCATTTGTAGGGAAATTATGGACTG ACTGTATTAGAATTTTTAAATGCATCTATTTCTTATGATGCCATTATTCTCTGTAATAGCTTGAATGATTAAATGCATGG AATCTTGCATATAACTTTGTCTGGCTCAAAAACTTTCAGGATAGTAAAGACTTGACATCGAGTAGTCCTAGTGAAAGTTC GGTTAGTGCTTCACATACACAGGACACCAGTTCTCCTGATATTTCTGTTAGTGTGCCGAATACTTCTCCAAAGTCATTTC AACCTGAGAATACCTTAAATATTGAGAGGTCACATGCACCATCAAACCCGTCAAATATGCAAGTGAAAGGATCCAGTTCA GATGTTTTTCGTGTTAGTGTCTCAAGTGCCCCCAGCACATCCAGCCATGGGTCTGCACCAGATGATTACGATGCTCTTGG GGATGTATACATATGGGGGGAGGTTATCTGTGAGAGTGTTGTGAAAGTCGGTGCTGATAAAAATGGCAGTTATTTAAGCC CAAGGGCAGATATTCTCCTCCCCAAGCCATTGGAGTCCAATGTGGTTTTAGATGTACTTCAAATAGCATGCGGTGTTAAA CATGCTGCTCTAGTTTCAAGGCAAGGTGAAATGTTTACATGGGGTGAAGAATCTGGAGGACGCCTTGGGCATGGTGTTGG GAAGAATGTGGTTCAACCTCGTCTAGTTGAAGCACTGGCTTCTACAACTGTTGACTTTGTTGCCTGTGGGGAGTTCCATA CATGTGCTGTTACAATGGCTGGGGAACTCTTTACATGGGGTGATGGTACTCATAAAGCTGGACTTCTTGGTCATGGAACT GATGTTAGTCATTGGATACCAAAGAGAATTGCTGGTCCATTAGAGGGGCTTCAAGTTGCTTTAGTCACTTGTGGTCCATG GCACACAGCTTTGATAACTTCAACCGGGCAGCTCTTCACATTCGGTGATGGAACATTTGGTGTCCTAGGCCACGGAGATA GGGAAAATGTTTCATATCCTAGAGAAGTAGAATCCTTGTCTGGTTTGAGGACAATAGCTGTTGCATGTGGAGTGTGGCAT ACTGCAGCTGTAGTAGAAGTTATTGTGACACAATCCAGTGCAAGTGTATCGTCAGGTAAATTATTTACTTGGGGTGATGG GGATAAGAGTCGTCTTGGACATGGAGACAAGGAGGCCCGGCTTGAACCAACTTGTGTACCTTCACTAATTGATCACAATT TTTATAGAATTGCTTGCGGGCACAGTTTGACGGCAGGCCTGACCACGCCTGGACAAGTTTTTACAATGGGAAGCACTGTT TATGGTCAGCTTGGGAATCCCCAGTCTGATGGAAAGCTACCTTGTTTGGTTCAAGACAAGCTTGCTGGAGAACCCGTTGA AGAAATTGCATGCGGGGCTTATCATGTAGTTGTTTTAACATCCAAAAATGAAGTTTATACTTGGGGAAAGGGTGCAAATG GGAGATTAGGTCATGGAGACGTTGAAGATAGAAAAGCACCCACTTTGGTTGAAGCCTTGAAAGATAGACATGTGAAATAT ATTGCATGTGGTTCAAACTACTCTGCTGCCATATGCCTTCATAAGTGGGTTTCTGGTGCTGAGCAGTCTCAGTGCGCTGC TTGTAGACAGGCATTTGGATTCACTAGAAAGAGGCACAACTGTTATAATTGTGGACTTGTGCACTGCCATTCATGCAGTT CAAGGAAAGCATTAAGAGCTGCCCTGGCTCCTAATCCTGGGAAGCCATACCGTGTTTGCGATTCTTGTCATGCGAAGTTG AACAAGGTTATAGATTCTGGCAATAATAATAGGAGGAATGCTATGCCTCGTTTGTCAGGTGAAAACAAGGACAGATTAGA AAAGTCTGATCTGAGATTGACTAAATCAGCAGTGCCTTCTAATATGGATTTGATAAAGCAGCTAGATAGTAAGGCAGCCA AACAGGGGAAGAAGGCCGATACATTCTCTCTGGTTCGTGCCTCTCAAGCACCGTCTTTGCTACAGCTCAAAGATGTTGTC TTGTCTACTGCTGTTGATCTGAAACGCACAGTTCCTAGACCTGTTCTTACACCATCTGGAGCAAGTTCCAGGTCTGTCGT GAGTTCCAGGTCTGTCTCCCCTTTCTCTAGAAGATCGAGCCCCCCTCGTTCAGCTACACCTATTCCAACAACATCAGGAC TTTCCTTCTCAAAAAATATTTCTGATAGTCTGAAGAAGACAAATGAACTATTGAATCAAGAAGTGCTAAAGTTACGCGCT CAGGTATGTTATGCTTCCTTCATTTGTCTTATTGGTTTGAGTTTGGCGAATAAACAATGTAAAACATGAGCAGTATCATG CCAGAAATGTTAATTTCTTGTCTTCGTGCTTATAATGTGATGTGCACTTATTACGGTATCAAGAGAGATCTAAGTTCTAA TGTAAATCTTGTTAGGTTGAGACACTGAGACAGAGATGTGAACTGCAAGAATTAGAGGTTCAAAGGTCAGCAAAAAAGAC TCAGGAAGCTATGTCACTGGCTGCTGAGGAATCTGCCAAATCTAAGGCTGCAAAAGAAGTTATAAAGTCACTTACAGCAC AGGTTAAATTTTTTGTTAATTTTACTGCTTCCTGAAGTGTGATGTTTATTTTCATGTGACACTTTTTCATTTATGGCTTT ATTGTGCTGGATCTTATTTTATTTTTTGTAGTTTTCATTCGAAGAAAATGAAAACCTAAATTAAACCATCTATCAAATTG GAACCTCTAATTGTAACAAAATACCAAGAGTTGGTTTTTGAGCAATGACTTTCGCTTTCACATATTATATTAACACCTAC ACTCCACGCTGAATACTGTTTTCCGTTTTTTTAAGAAAAAAATTCCCTACAGTTCCATTCCTTTTCCCTTTCATTGTATT TTTGTTCTATACTTGTGCTTATTGGTCTGTCACATTGTTTCAGCTCAAAGATCTGGCTGAGAGGCTTCCTCCTGGTATTT ATGATGCTGAAAACATCAGACCTGCTTACGTGCCGAATGGTCTGGAGCCAAACGGCATCCACCATCCAGACTTAAATGGG GAGCACCACACCAGAGCAGAGTCAATCAGTGGCTCTAGTTTAGCTTCTGTAGGACTTGAATACTCTCTGATGAGTAGAAT CGAGGGGACTTTGCCTGGAAGCTATGGTCTTTACCAGCAAAACCGCGGGCCTGTGACCACCAACAGAACAGAAGATTACC CGGACGTCAAATTGCCTAATGGCAGTAGTGTGATTCAGGCAAGCAACAGTAGTGTGTCAGATACTGTTGATGGTAGGGAT TCTGGGAATTTCCAAGATGACGAGAGTGGTTCAAGATCAAGGAATGCTGTATCGCCTGCTGCTAGTAATCATGTTGAGGC AGAATGGATTGAACAGTATGAGCCCGGCGTCTATATAACACTGGTTGCCCTGCGTGATGGAACTCGAGATCTAAAGCGAG TGCGCTTCAGGTAATAGAAGAATTCTCCACAGTTCCAGGTTATGTTTATCTGGTTCAACTGGTATTTGTGGCTGCCAAAT AAATTATTGGTTAATTGCCTTGTAAATAATTTTATTTCTTTCACTAACTCTGCATGTGGGTTGATTTTTTACTCCTGAAA CCCTATCCATGTTTTAACTAAGATATTGCTTAAATTATATTGCAATCATCATCTTGCATGTGTAACATGTTTGATAATTA ATGTGTATGCAGCCGGAGAAGATTTGGCGAGCACCAAGCAGAGACTTGGTGGTCAGAGAACCGCGAAAAGGTATACGAAA AGTACAATGTTCGAAGCACAGACAAGTCTACGGGCCAAGCATCACGCAGGGGAGAGGGTGCTGGTTCACCTGTTCTATAA TCTTAGGAAAATAGATGGAGGGAAGTTCTCCATTAACATATTTTGTTGCAGTGAGCATCGTTTTAGGAAATCAAGAATAT GAAAGGAACCAGGCACCCTTTTTGAGCTTCATTGTCTATCATTGTTCCCTTCAATCTTCTCACCATTTCTCTTAAGTTAA ACGTCTTCATTTTATTTGGGCAAGTGCCCTTTACTGTTGTATTGTAGTGTATATAAAATCATCAATCGATATAACCTTCG TATTTTCTTTGTTTTCCCTCCTTGTCTCATCTCTTTTCTTAGCACTAGATGTATATCTCATGCATAAGATGTACTTGGTG ATATTTTTTGTAAATCGATATTTAATTATTAGAGGGAGTAGTAATTTGTACTTGATTTAGCATTATTCTTTGTAAAGAAG CGTCCCCAGTTACGGAAAGCACTTGCAGATGTCATCATCAAGATACGAATGAATGTGCAGGTTGTGTGTATGTTTGGGTG CAAAACCCTTGCTATAAGTGGATATGGAAAGTTGTGTATGTTTTTAAATGTGTTATTCTAAGGAGCCCTTTTCAACAGAA GCTTCAAATACTGGTGTAGATGAGCAAGAAGCCCTGCATGCTTGTTAAGTGTTAACCACCTTTGACTTGCTCACATTTGA TACAAATGATGAATGATTCTAAATTCCTCTCTAGAACATGTAACTTTTTCTAATAATATCGATAGATGCTTAAAAAAATT ATGGGTTGGCTATGTTTTGGCTGCAGGGCTCTTCTTGTTTCTTGGCCTATTCATGACGAGCATGTTTCCCT
CDS sequence (LotjaGi5g1v0293400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGATCTTGTTAGCCACAGGAATGCCGACCGTGACATCGACCAGGCATTGATTGCTTTGAAAAAGGGTGCTCAACT GCTTAAATATGGTCGTAAGGGAAAGCCTAAGTTTTGCCCATTTAGACTTTCCAGTGATGAATTGTCTTTAATCTGGATTT CAAGTAGTGGAGAAAAAAGTCTGAAGCTATCTTCGATCTCAAGAATTATTCCTGGACAAAGAACTGCTGTTTTCCAACGA TATCTGCGTCCTGAGAAGGACTATTTGTCCTTTTCACTTATTTATAACCACGGGAAGCGATCCCTTGATTTGATTTGCAA GGATAAGGTTCAGGCAGAATTGTGGATTACTGGTCTCAAGGCACTGATTTCTTCTGGTCAAGGTGGGCGTTCCAAAATAG ATGGATGGAGTGATGGAGGCCTATGTCTTGATGATAGTAAAGACTTGACATCGAGTAGTCCTAGTGAAAGTTCGGTTAGT GCTTCACATACACAGGACACCAGTTCTCCTGATATTTCTGTTAGTGTGCCGAATACTTCTCCAAAGTCATTTCAACCTGA GAATACCTTAAATATTGAGAGGTCACATGCACCATCAAACCCGTCAAATATGCAAGTGAAAGGATCCAGTTCAGATGTTT TTCGTGTTAGTGTCTCAAGTGCCCCCAGCACATCCAGCCATGGGTCTGCACCAGATGATTACGATGCTCTTGGGGATGTA TACATATGGGGGGAGGTTATCTGTGAGAGTGTTGTGAAAGTCGGTGCTGATAAAAATGGCAGTTATTTAAGCCCAAGGGC AGATATTCTCCTCCCCAAGCCATTGGAGTCCAATGTGGTTTTAGATGTACTTCAAATAGCATGCGGTGTTAAACATGCTG CTCTAGTTTCAAGGCAAGGTGAAATGTTTACATGGGGTGAAGAATCTGGAGGACGCCTTGGGCATGGTGTTGGGAAGAAT GTGGTTCAACCTCGTCTAGTTGAAGCACTGGCTTCTACAACTGTTGACTTTGTTGCCTGTGGGGAGTTCCATACATGTGC TGTTACAATGGCTGGGGAACTCTTTACATGGGGTGATGGTACTCATAAAGCTGGACTTCTTGGTCATGGAACTGATGTTA GTCATTGGATACCAAAGAGAATTGCTGGTCCATTAGAGGGGCTTCAAGTTGCTTTAGTCACTTGTGGTCCATGGCACACA GCTTTGATAACTTCAACCGGGCAGCTCTTCACATTCGGTGATGGAACATTTGGTGTCCTAGGCCACGGAGATAGGGAAAA TGTTTCATATCCTAGAGAAGTAGAATCCTTGTCTGGTTTGAGGACAATAGCTGTTGCATGTGGAGTGTGGCATACTGCAG CTGTAGTAGAAGTTATTGTGACACAATCCAGTGCAAGTGTATCGTCAGGTAAATTATTTACTTGGGGTGATGGGGATAAG AGTCGTCTTGGACATGGAGACAAGGAGGCCCGGCTTGAACCAACTTGTGTACCTTCACTAATTGATCACAATTTTTATAG AATTGCTTGCGGGCACAGTTTGACGGCAGGCCTGACCACGCCTGGACAAGTTTTTACAATGGGAAGCACTGTTTATGGTC AGCTTGGGAATCCCCAGTCTGATGGAAAGCTACCTTGTTTGGTTCAAGACAAGCTTGCTGGAGAACCCGTTGAAGAAATT GCATGCGGGGCTTATCATGTAGTTGTTTTAACATCCAAAAATGAAGTTTATACTTGGGGAAAGGGTGCAAATGGGAGATT AGGTCATGGAGACGTTGAAGATAGAAAAGCACCCACTTTGGTTGAAGCCTTGAAAGATAGACATGTGAAATATATTGCAT GTGGTTCAAACTACTCTGCTGCCATATGCCTTCATAAGTGGGTTTCTGGTGCTGAGCAGTCTCAGTGCGCTGCTTGTAGA CAGGCATTTGGATTCACTAGAAAGAGGCACAACTGTTATAATTGTGGACTTGTGCACTGCCATTCATGCAGTTCAAGGAA AGCATTAAGAGCTGCCCTGGCTCCTAATCCTGGGAAGCCATACCGTGTTTGCGATTCTTGTCATGCGAAGTTGAACAAGG TTATAGATTCTGGCAATAATAATAGGAGGAATGCTATGCCTCGTTTGTCAGGTGAAAACAAGGACAGATTAGAAAAGTCT GATCTGAGATTGACTAAATCAGCAGTGCCTTCTAATATGGATTTGATAAAGCAGCTAGATAGTAAGGCAGCCAAACAGGG GAAGAAGGCCGATACATTCTCTCTGGTTCGTGCCTCTCAAGCACCGTCTTTGCTACAGCTCAAAGATGTTGTCTTGTCTA CTGCTGTTGATCTGAAACGCACAGTTCCTAGACCTGTTCTTACACCATCTGGAGCAAGTTCCAGGTCTGTCGTGAGTTCC AGGTCTGTCTCCCCTTTCTCTAGAAGATCGAGCCCCCCTCGTTCAGCTACACCTATTCCAACAACATCAGGACTTTCCTT CTCAAAAAATATTTCTGATAGTCTGAAGAAGACAAATGAACTATTGAATCAAGAAGTGCTAAAGTTACGCGCTCAGGTTG AGACACTGAGACAGAGATGTGAACTGCAAGAATTAGAGGTTCAAAGGTCAGCAAAAAAGACTCAGGAAGCTATGTCACTG GCTGCTGAGGAATCTGCCAAATCTAAGGCTGCAAAAGAAGTTATAAAGTCACTTACAGCACAGCTCAAAGATCTGGCTGA GAGGCTTCCTCCTGGTATTTATGATGCTGAAAACATCAGACCTGCTTACGTGCCGAATGGTCTGGAGCCAAACGGCATCC ACCATCCAGACTTAAATGGGGAGCACCACACCAGAGCAGAGTCAATCAGTGGCTCTAGTTTAGCTTCTGTAGGACTTGAA TACTCTCTGATGAGTAGAATCGAGGGGACTTTGCCTGGAAGCTATGGTCTTTACCAGCAAAACCGCGGGCCTGTGACCAC CAACAGAACAGAAGATTACCCGGACGTCAAATTGCCTAATGGCAGTAGTGTGATTCAGGCAAGCAACAGTAGTGTGTCAG ATACTGTTGATGGTAGGGATTCTGGGAATTTCCAAGATGACGAGAGTGGTTCAAGATCAAGGAATGCTGTATCGCCTGCT GCTAGTAATCATGTTGAGGCAGAATGGATTGAACAGTATGAGCCCGGCGTCTATATAACACTGGTTGCCCTGCGTGATGG AACTCGAGATCTAAAGCGAGTGCGCTTCAGCCGGAGAAGATTTGGCGAGCACCAAGCAGAGACTTGGTGGTCAGAGAACC GCGAAAAGGTATACGAAAAGTACAATGTTCGAAGCACAGACAAGTCTACGGGCCAAGCATCACGCAGGGGAGAGGGTGCT GGTTCACCTGTTCTATAA
Protein sequence (LotjaGi5g1v0293400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADLVSHRNADRDIDQALIALKKGAQLLKYGRKGKPKFCPFRLSSDELSLIWISSSGEKSLKLSSISRIIPGQRTAVFQR YLRPEKDYLSFSLIYNHGKRSLDLICKDKVQAELWITGLKALISSGQGGRSKIDGWSDGGLCLDDSKDLTSSSPSESSVS ASHTQDTSSPDISVSVPNTSPKSFQPENTLNIERSHAPSNPSNMQVKGSSSDVFRVSVSSAPSTSSHGSAPDDYDALGDV YIWGEVICESVVKVGADKNGSYLSPRADILLPKPLESNVVLDVLQIACGVKHAALVSRQGEMFTWGEESGGRLGHGVGKN VVQPRLVEALASTTVDFVACGEFHTCAVTMAGELFTWGDGTHKAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHT ALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDK SRLGHGDKEARLEPTCVPSLIDHNFYRIACGHSLTAGLTTPGQVFTMGSTVYGQLGNPQSDGKLPCLVQDKLAGEPVEEI ACGAYHVVVLTSKNEVYTWGKGANGRLGHGDVEDRKAPTLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCAACR QAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDSCHAKLNKVIDSGNNNRRNAMPRLSGENKDRLEKS DLRLTKSAVPSNMDLIKQLDSKAAKQGKKADTFSLVRASQAPSLLQLKDVVLSTAVDLKRTVPRPVLTPSGASSRSVVSS RSVSPFSRRSSPPRSATPIPTTSGLSFSKNISDSLKKTNELLNQEVLKLRAQVETLRQRCELQELEVQRSAKKTQEAMSL AAEESAKSKAAKEVIKSLTAQLKDLAERLPPGIYDAENIRPAYVPNGLEPNGIHHPDLNGEHHTRAESISGSSLASVGLE YSLMSRIEGTLPGSYGLYQQNRGPVTTNRTEDYPDVKLPNGSSVIQASNSSVSDTVDGRDSGNFQDDESGSRSRNAVSPA ASNHVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYEKYNVRSTDKSTGQASRRGEGA GSPVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 8 | 1108 | 1101 | 0.0 | – | |
PANTHER | 8 | 1108 | 1101 | 0.0 | – | |
CDD | 12 | 124 | 113 | 1.39099E-50 | – | |
Gene3D | 12 | 132 | 121 | 3.0E-22 | ||
SUPERFAMILY | 13 | 123 | 111 | 2.32E-25 | – | |
Pfam | 42 | 123 | 82 | 5.9E-7 | ||
MobiDBLite | 147 | 230 | 84 | - | – | |
MobiDBLite | 147 | 231 | 85 | - | – | |
Gene3D | 184 | 457 | 274 | 5.9E-55 | ||
SUPERFAMILY | 238 | 627 | 390 | 7.19E-94 | ||
ProSiteProfiles | 238 | 299 | 62 | 8.635 | ||
PRINTS | 283 | 296 | 14 | 4.2E-14 | ||
ProSitePatterns | 286 | 296 | 11 | - | ||
ProSiteProfiles | 300 | 351 | 52 | 13.981 | ||
Pfam | 300 | 348 | 49 | 3.4E-8 | ||
PRINTS | 302 | 318 | 17 | 4.2E-14 | ||
Pfam | 352 | 403 | 52 | 2.8E-8 | ||
ProSiteProfiles | 352 | 406 | 55 | 13.559 | ||
PRINTS | 352 | 368 | 17 | 4.2E-14 | ||
ProSitePatterns | 393 | 403 | 11 | - | ||
PRINTS | 393 | 409 | 17 | 4.2E-14 | ||
ProSiteProfiles | 407 | 458 | 52 | 13.378 | ||
Pfam | 407 | 455 | 49 | 1.8E-13 | ||
PRINTS | 409 | 423 | 15 | 4.2E-14 | ||
ProSitePatterns | 445 | 455 | 11 | - | ||
Gene3D | 458 | 630 | 173 | 2.9E-46 | ||
Pfam | 469 | 516 | 48 | 1.5E-10 | ||
ProSiteProfiles | 470 | 521 | 52 | 13.499 | ||
PRINTS | 511 | 529 | 19 | 4.2E-14 | ||
Pfam | 522 | 570 | 49 | 4.6E-7 | ||
ProSiteProfiles | 522 | 573 | 52 | 13.559 | ||
PRINTS | 569 | 590 | 22 | 4.2E-14 | ||
ProSiteProfiles | 574 | 625 | 52 | 15.006 | ||
Pfam | 575 | 622 | 48 | 1.5E-13 | ||
SMART | 624 | 693 | 70 | 4.2E-19 | ||
SUPERFAMILY | 626 | 700 | 75 | 3.98E-18 | ||
Pfam | 626 | 692 | 67 | 4.4E-13 | ||
ProSiteProfiles | 630 | 692 | 63 | 11.557 | ||
Gene3D | 631 | 703 | 73 | 5.2E-16 | ||
MobiDBLite | 697 | 717 | 21 | - | – | |
MobiDBLite | 784 | 828 | 45 | - | – | |
MobiDBLite | 787 | 828 | 42 | - | – | |
Coils | 832 | 873 | 42 | - | – | |
Pfam | 883 | 918 | 36 | 1.6E-18 | ||
Coils | 888 | 908 | 21 | - | – | |
MobiDBLite | 931 | 950 | 20 | - | – | |
MobiDBLite | 973 | 1041 | 69 | - | – | |
MobiDBLite | 974 | 988 | 15 | - | – | |
MobiDBLite | 1001 | 1019 | 19 | - | – | |
Pfam | 1046 | 1101 | 56 | 1.9E-29 | ||
ProSiteProfiles | 1047 | 1102 | 56 | 36.491 | ||
MobiDBLite | 1103 | 1125 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi5g1v0293400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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