Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0293400 |
| Transcript ID | LotjaGi5g1v0293400.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|V7BF38|V7BF38_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0293400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61088752..61096822) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAAAGATATTCTGTTATAGTAACTTTAACATGATCAAAACTCTCTCAAAAAGTACAACTCATAGCAACCAAGCTCT CAACCTTACCCGTTCAAACAACTATCTTTTGACACATCATGTCTTTCGGGTCCAATCCAATTTGATCTTTTTCACTTCTA GTTTCAGGAGAATTTATTTATGCTTTTCCTCATTACCTCATATAAAATCATTTTTAATTTAATTTTAATTATTTTCTTCA TGTGTTCTTCTTTTTGACTAGTTGTACTTTTTACACGCTCCGATTCTCTCTCTCTAAACTCTGTTTCTCCCTCCTCTGTC TGCTCCCATCACCCGCTTCGGCGACACCGCCGGAACTCGTACTCGTTGCCGGAATTTCTCTCCCGCCGCCGCAAACCGCC TCCTTCTCACACTTCCAATCAAACCGCTTCAACCGGGTTTCCTTTCGTTTCTCTCCCTAGTCCAAGTCGCTGCATGAGTT GAAGAATCAACGAGTTTGACTTGGAATTGTCAATGGGGTTACTGGGTTTCTAGTTTCTTTGCATAGGAACAGATCCACGA AGGTTTTTCGCATTCTAGAGCGAGAATAAGAAGTGGGTTTTGATTTTCAGAGAGAGAGATTGAGGTTGAGGTTTATCATG TACGGAGCTCTGAACAGCGATCGCAGAGGGTGGTGGAGTTCCGGTGAATCTTTCACCTGGAATGGCAGATCTTGTTAGCC ACAGGAATGCCGACCGTGACATCGACCAGGTGAGTTACTAGTTCAATGTGAAAGTTCAACGTTGTGATTTTTCAGTCAAA TTTTGTTGCTATGTTTCGGTTTACGGTCAAACATGGGAACTGGTTTTATTGTTGAAGGTGTTTTTTTTTTCTTATTTGGT GGCTAGGAATGTTATGATCATATGATCAAGTTGTTTTGTGTGTCTACTTGTTTGAACTGATTGGGAAATTTGAGGGAAGT GAGAAGCTGAGAATATAGTGAAGACATAGCGTGTGAATTTATGTATTGCGGCGTCTATGTTGTTTTGGGATGCCAAAATT AGGATGAAAATTTTGATGGGTTTTTGGCCCTAAATGGTGTGGTTGATTTAAAGGAATTGTTCCTTTATCAGCTGTGTTGG AATGGTGTGTCTTGAAAAGGAAAGATATGGCCGGCACCCTTGGGGCCGTGATATGGTTTGACTGACTTGAATTAAATTGT TAAAAGGTAAGTGCTAACTCTGTATGAGGGTAGATAAACTTTTGATGCCATCTTTTAATGATAACATTGTGAAGGGCAGC TCCTTATGAAAATGTCTTGGATCATTTGATTCGTGATGTTGTACCTTAAATCAGTTTTCTTGTAATGGCTGTACTAAGTA ATAACTAGATGGAGTGATGTCTGAAGTAGCATTTGGATAATGAAATGGAGCCTACAATAATGTTGATTACTTGAAGAATA ATAGTTATGTCCCTAGAAATATCTGTCCTGTAAAACAATTTTCAGCCATCTATTTTGGTGAAAATATTAAGTGGAAAACA GATTCGTCCAGAAGAAACTGAATGTTGTGAAATTACAGGAATTCTTATGAAACTTTACAAAATTTGTGTTATAATATGGC TTAAATCATGGTTATATTTCATTACTCCCGGTCCAGGCCAGCTATATATCTTACATAAATAATTGTTTGTCTGTTTAATC TTTCATTTGGTTTACCATGTTACCTTTTCATTGTGCAGGCATTGATTGCTTTGAAAAAGGGTGCTCAACTGCTTAAATAT GGTCGTAAGGGAAAGCCTAAGTTTTGCCCATTTAGACTTTCCAGTGTAAGTTACATAAAATCCTTTTCAGGGAAGTGTAT GTGGATTCTCTATATCGCTTGCTAATTATCATTGTGGTTGGACAGTACACAACTCATTATATTCTCAATTTCAATTAATC TGTGATAGATAGGTACTTCCACATGTTAGTTGATGTTATATGAATCACATAATAGGAAAGGACATTTGAATTGTATTTTC TATACTTTTATCTGCTCTTTTATTACACGTTAACGCTATTTTTAGGTGTCTTGCTCAGGAGAAATGTACTGATTGAAACC ATTAAAAAGACCTAGTTTTAAATGGTTTTGTTGAAAACTGGTTTATGACAATGTTAAAGTTATAGTGGTACTAATGATAT CAAATGCAATTGACGTAAGATTTCTGTGAGTAGACCTTACAGGGCACCATTCAATTCTTCTATAAGATTGATGTCTGTCA TACACTCCTACTGTTTATCTTTTTTGTTTCCATATCCTTAATTTCATTAGCTAGGAGTGATTATTAAGGCTCTGTTTGCG AATCAGTACTGTACAACGCCATGTTAATGGAAAAAATATTTGCTTTGACGTTTTTGATCTTGGAAATTTGAATCCTACTT TCTGAGACATATTAAATGGATGTTTTGCTTAAAACAAACATACTCTAAGTTGTGATCTCTAGCTAACTTAATGTGTTGGT TGTAGATCCTGCTCCTAGTCTTTTAGTGCCCATTTTCTGTCTTTCCTTCTTTTGATGGTGCAGTCTATCCTTGTTTACTG CATTTGACAGTCATGTATTTCTAACTGTACTCATTATAATCTCCATAAACCACAGGATGAATTGTCTTTAATCTGGATTT CAAGTAGTGGAGAAAAAAGTCTGAAGCTATCTTCGATCTCAAGAATTATTCCTGGACAAAGAACTGTGAGAATTCTACCC TATTACTTTATATCATTCTAACGCCTGAGAGTTCTTTGTGATTAGCTAAGTGATTTTTAAGAATTGTTCTATAAATGTTT CTTCTCTGTTATTTGATTGTTTTTCTTATCTTCTGGCAGGCTGTTTTCCAACGATATCTGCGTCCTGAGAAGGACTATTT GTCCTTTTCACTTATTTATAACCACGGGAAGCGATCCCTTGATTTGGTTGGTGCTCAGCTCTGAAATTCCATGGAAAACT ACACCATCTTTTATTTCTATTTTCTGCATTTTCCATTCTAACGAATAATTTTTCTTGTTGTGTTTCAGATTTGCAAGGAT AAGGTTCAGGCAGAATTGTGGATTACTGGTCTCAAGGCACTGATTTCTTCTGGTCAAGGTGGGCGTTCCAAAATAGATGG ATGGAGTGATGGAGGCCTATGTCTTGATGTAAAATTCCTACTTGTTGTCTTGTCTATGTAATTATTTCATCATTTTCCTT GAAATAAATGTTTTGGTGAATCTCAACAGGGAGAACTTATTGATTTTCTGCTTCATCAGAAAACTAGTTATTGTTTCCTT TGAGGGAAAAATAATCTTTATGTAATGGATTTGCATGACTTATCTTGAAAAACATTTATACTATAGTTTTTTGAAACAAC AGTTTAGGAATAGTTGCTTTTGGCATTTGCCTATTTTAGTTTTTCTGTGCTGATTTCATTTGTAGGGAAATTATGGACTG ACTGTATTAGAATTTTTAAATGCATCTATTTCTTATGATGCCATTATTCTCTGTAATAGCTTGAATGATTAAATGCATGG AATCTTGCATATAACTTTGTCTGGCTCAAAAACTTTCAGGATAGTAAAGACTTGACATCGAGTAGTCCTAGTGAAAGTTC GGTTAGTGCTTCACATACACAGGACACCAGTTCTCCTGATATTTCTGTTAGTGTGCCGAATACTTCTCCAAAGTCATTTC AACCTGAGAATACCTTAAATATTGAGAGGTCACATGCACCATCAAACCCGTCAAATATGCAAGTGAAAGGATCCAGTTCA GATGTTTTTCGTGTTAGTGTCTCAAGTGCCCCCAGCACATCCAGCCATGGGTCTGCACCAGATGATTACGATGCTCTTGG GGATGTATACATATGGGGGGAGGTTATCTGTGAGAGTGTTGTGAAAGTCGGTGCTGATAAAAATGGCAGTTATTTAAGCC CAAGGGCAGATATTCTCCTCCCCAAGCCATTGGAGTCCAATGTGGTTTTAGATGTACTTCAAATAGCATGCGGTGTTAAA CATGCTGCTCTAGTTTCAAGGCAAGGTGAAATGTTTACATGGGGTGAAGAATCTGGAGGACGCCTTGGGCATGGTGTTGG GAAGAATGTGGTTCAACCTCGTCTAGTTGAAGCACTGGCTTCTACAACTGTTGACTTTGTTGCCTGTGGGGAGTTCCATA CATGTGCTGTTACAATGGCTGGGGAACTCTTTACATGGGGTGATGGTACTCATAAAGCTGGACTTCTTGGTCATGGAACT GATGTTAGTCATTGGATACCAAAGAGAATTGCTGGTCCATTAGAGGGGCTTCAAGTTGCTTTAGTCACTTGTGGTCCATG GCACACAGCTTTGATAACTTCAACCGGGCAGCTCTTCACATTCGGTGATGGAACATTTGGTGTCCTAGGCCACGGAGATA GGGAAAATGTTTCATATCCTAGAGAAGTAGAATCCTTGTCTGGTTTGAGGACAATAGCTGTTGCATGTGGAGTGTGGCAT ACTGCAGCTGTAGTAGAAGTTATTGTGACACAATCCAGTGCAAGTGTATCGTCAGGTAAATTATTTACTTGGGGTGATGG GGATAAGAGTCGTCTTGGACATGGAGACAAGGAGGCCCGGCTTGAACCAACTTGTGTACCTTCACTAATTGATCACAATT TTTATAGAATTGCTTGCGGGCACAGTTTGACGGCAGGCCTGACCACGCCTGGACAAGTTTTTACAATGGGAAGCACTGTT TATGGTCAGCTTGGGAATCCCCAGTCTGATGGAAAGCTACCTTGTTTGGTTCAAGACAAGCTTGCTGGAGAACCCGTTGA AGAAATTGCATGCGGGGCTTATCATGTAGTTGTTTTAACATCCAAAAATGAAGTTTATACTTGGGGAAAGGGTGCAAATG GGAGATTAGGTCATGGAGACGTTGAAGATAGAAAAGCACCCACTTTGGTTGAAGCCTTGAAAGATAGACATGTGAAATAT ATTGCATGTGGTTCAAACTACTCTGCTGCCATATGCCTTCATAAGTGGGTTTCTGGTGCTGAGCAGTCTCAGTGCGCTGC TTGTAGACAGGCATTTGGATTCACTAGAAAGAGGCACAACTGTTATAATTGTGGACTTGTGCACTGCCATTCATGCAGTT CAAGGAAAGCATTAAGAGCTGCCCTGGCTCCTAATCCTGGGAAGCCATACCGTGTTTGCGATTCTTGTCATGCGAAGTTG AACAAGGTTATAGATTCTGGCAATAATAATAGGAGGAATGCTATGCCTCGTTTGTCAGGTGAAAACAAGGACAGATTAGA AAAGTCTGATCTGAGATTGACTAAATCAGCAGTGCCTTCTAATATGGATTTGATAAAGCAGCTAGATAGTAAGGCAGCCA AACAGGGGAAGAAGGCCGATACATTCTCTCTGGTTCGTGCCTCTCAAGCACCGTCTTTGCTACAGCTCAAAGATGTTGTC TTGTCTACTGCTGTTGATCTGAAACGCACAGTTCCTAGACCTGTTCTTACACCATCTGGAGCAAGTTCCAGGTCTGTCGT GAGTTCCAGGTCTGTCTCCCCTTTCTCTAGAAGATCGAGCCCCCCTCGTTCAGCTACACCTATTCCAACAACATCAGGAC TTTCCTTCTCAAAAAATATTTCTGATAGTCTGAAGAAGACAAATGAACTATTGAATCAAGAAGTGCTAAAGTTACGCGCT CAGGTATGTTATGCTTCCTTCATTTGTCTTATTGGTTTGAGTTTGGCGAATAAACAATGTAAAACATGAGCAGTATCATG CCAGAAATGTTAATTTCTTGTCTTCGTGCTTATAATGTGATGTGCACTTATTACGGTATCAAGAGAGATCTAAGTTCTAA TGTAAATCTTGTTAGGTTGAGACACTGAGACAGAGATGTGAACTGCAAGAATTAGAGGTTCAAAGGTCAGCAAAAAAGAC TCAGGAAGCTATGTCACTGGCTGCTGAGGAATCTGCCAAATCTAAGGCTGCAAAAGAAGTTATAAAGTCACTTACAGCAC AGGTTAAATTTTTTGTTAATTTTACTGCTTCCTGAAGTGTGATGTTTATTTTCATGTGACACTTTTTCATTTATGGCTTT ATTGTGCTGGATCTTATTTTATTTTTTGTAGTTTTCATTCGAAGAAAATGAAAACCTAAATTAAACCATCTATCAAATTG GAACCTCTAATTGTAACAAAATACCAAGAGTTGGTTTTTGAGCAATGACTTTCGCTTTCACATATTATATTAACACCTAC ACTCCACGCTGAATACTGTTTTCCGTTTTTTTAAGAAAAAAATTCCCTACAGTTCCATTCCTTTTCCCTTTCATTGTATT TTTGTTCTATACTTGTGCTTATTGGTCTGTCACATTGTTTCAGCTCAAAGATCTGGCTGAGAGGCTTCCTCCTGGTATTT ATGATGCTGAAAACATCAGACCTGCTTACGTGCCGAATGGTCTGGAGCCAAACGGCATCCACCATCCAGACTTAAATGGG GAGCACCACACCAGAGCAGAGTCAATCAGTGGCTCTAGTTTAGCTTCTGTAGGACTTGAATACTCTCTGATGAGTAGAAT CGAGGGGACTTTGCCTGGAAGCTATGGTCTTTACCAGCAAAACCGCGGGCCTGTGACCACCAACAGAACAGAAGATTACC CGGACGTCAAATTGCCTAATGGCAGTAGTGTGATTCAGGCAAGCAACAGTAGTGTGTCAGATACTGTTGATGGTAGGGAT TCTGGGAATTTCCAAGATGACGAGAGTGGTTCAAGATCAAGGAATGCTGTATCGCCTGCTGCTAGTAATCATGTTGAGGC AGAATGGATTGAACAGTATGAGCCCGGCGTCTATATAACACTGGTTGCCCTGCGTGATGGAACTCGAGATCTAAAGCGAG TGCGCTTCAGGTAATAGAAGAATTCTCCACAGTTCCAGGTTATGTTTATCTGGTTCAACTGGTATTTGTGGCTGCCAAAT AAATTATTGGTTAATTGCCTTGTAAATAATTTTATTTCTTTCACTAACTCTGCATGTGGGTTGATTTTTTACTCCTGAAA CCCTATCCATGTTTTAACTAAGATATTGCTTAAATTATATTGCAATCATCATCTTGCATGTGTAACATGTTTGATAATTA ATGTGTATGCAGCCGGAGAAGATTTGGCGAGCACCAAGCAGAGACTTGGTGGTCAGAGAACCGCGAAAAGGTATACGAAA AGTACAATGTTCGAAGCACAGACAAGTCTACGGGCCAAGCATCACGCAGGGGAGAGGGTGCTGGTTCACCTGTTCTATAA TCTTAGGAAAATAGATGGAGGGAAGTTCTCCATTAACATATTTTGTTGCAGTGAGCATCGTTTTAGGAAATCAAGAATAT GAAAGGAACCAGGCACCCTTTTTGAGCTTCATTGTCTATCATTGTTCCCTTCAATCTTCTCACCATTTCTCTTAAGTTAA ACGTCTTCATTTTATTTGGGCAAGTGCCCTTTACTGTTGTATTGTAGTGTATATAAAATCATCAATCGATATAACCTTCG TATTTTCTTTGTTTTCCCTCCTTGTCTCATCTCTTTTCTTAGCACTAGATGTATATCTCATGCATAAGATGTACTTGGTG ATATTTTTTGTAAATCGATATTTAATTATTAGAGGGAGTAGTAATTTGTACTTGATTTAGCATTATTCTTTGTAAAGAAG CGTCCCCAGTTACGGAAAGCACTTGCAGATGTCATCATCAAGATACGAATGAATGTGCAGGTTGTGTGTATGTTTGGGTG CAAAACCCTTGCTATAAGTGGATATGGAAAGTTGTGTATGTTTTTAAATGTGTTATTCTAAGGAGCCCTTTTCAACAGAA GCTTCAAATACTGGTGTAGATGAGCAAGAAGCCCTGCATGCTTGTTAAGTGTTAACCACCTTTGACTTGCTCACATTTGA TACAAATGATGAATGATTCTAAATTCCTCTCTAGAACATGTAACTTTTTCTAATAATATCGATAGATGCTTAAAAAAATT ATGGGTTGGCTATGTTTTGGCTGCAGGGCTCTTCTTGTTTCTTGGCCTATTCATGACGAGCATGTTTCCCT
CDS sequence (LotjaGi5g1v0293400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGATCTTGTTAGCCACAGGAATGCCGACCGTGACATCGACCAGGCATTGATTGCTTTGAAAAAGGGTGCTCAACT GCTTAAATATGGTCGTAAGGGAAAGCCTAAGTTTTGCCCATTTAGACTTTCCAGTGATGAATTGTCTTTAATCTGGATTT CAAGTAGTGGAGAAAAAAGTCTGAAGCTATCTTCGATCTCAAGAATTATTCCTGGACAAAGAACTGCTGTTTTCCAACGA TATCTGCGTCCTGAGAAGGACTATTTGTCCTTTTCACTTATTTATAACCACGGGAAGCGATCCCTTGATTTGATTTGCAA GGATAAGGTTCAGGCAGAATTGTGGATTACTGGTCTCAAGGCACTGATTTCTTCTGGTCAAGGTGGGCGTTCCAAAATAG ATGGATGGAGTGATGGAGGCCTATGTCTTGATGATAGTAAAGACTTGACATCGAGTAGTCCTAGTGAAAGTTCGGTTAGT GCTTCACATACACAGGACACCAGTTCTCCTGATATTTCTGTTAGTGTGCCGAATACTTCTCCAAAGTCATTTCAACCTGA GAATACCTTAAATATTGAGAGGTCACATGCACCATCAAACCCGTCAAATATGCAAGTGAAAGGATCCAGTTCAGATGTTT TTCGTGTTAGTGTCTCAAGTGCCCCCAGCACATCCAGCCATGGGTCTGCACCAGATGATTACGATGCTCTTGGGGATGTA TACATATGGGGGGAGGTTATCTGTGAGAGTGTTGTGAAAGTCGGTGCTGATAAAAATGGCAGTTATTTAAGCCCAAGGGC AGATATTCTCCTCCCCAAGCCATTGGAGTCCAATGTGGTTTTAGATGTACTTCAAATAGCATGCGGTGTTAAACATGCTG CTCTAGTTTCAAGGCAAGGTGAAATGTTTACATGGGGTGAAGAATCTGGAGGACGCCTTGGGCATGGTGTTGGGAAGAAT GTGGTTCAACCTCGTCTAGTTGAAGCACTGGCTTCTACAACTGTTGACTTTGTTGCCTGTGGGGAGTTCCATACATGTGC TGTTACAATGGCTGGGGAACTCTTTACATGGGGTGATGGTACTCATAAAGCTGGACTTCTTGGTCATGGAACTGATGTTA GTCATTGGATACCAAAGAGAATTGCTGGTCCATTAGAGGGGCTTCAAGTTGCTTTAGTCACTTGTGGTCCATGGCACACA GCTTTGATAACTTCAACCGGGCAGCTCTTCACATTCGGTGATGGAACATTTGGTGTCCTAGGCCACGGAGATAGGGAAAA TGTTTCATATCCTAGAGAAGTAGAATCCTTGTCTGGTTTGAGGACAATAGCTGTTGCATGTGGAGTGTGGCATACTGCAG CTGTAGTAGAAGTTATTGTGACACAATCCAGTGCAAGTGTATCGTCAGGTAAATTATTTACTTGGGGTGATGGGGATAAG AGTCGTCTTGGACATGGAGACAAGGAGGCCCGGCTTGAACCAACTTGTGTACCTTCACTAATTGATCACAATTTTTATAG AATTGCTTGCGGGCACAGTTTGACGGCAGGCCTGACCACGCCTGGACAAGTTTTTACAATGGGAAGCACTGTTTATGGTC AGCTTGGGAATCCCCAGTCTGATGGAAAGCTACCTTGTTTGGTTCAAGACAAGCTTGCTGGAGAACCCGTTGAAGAAATT GCATGCGGGGCTTATCATGTAGTTGTTTTAACATCCAAAAATGAAGTTTATACTTGGGGAAAGGGTGCAAATGGGAGATT AGGTCATGGAGACGTTGAAGATAGAAAAGCACCCACTTTGGTTGAAGCCTTGAAAGATAGACATGTGAAATATATTGCAT GTGGTTCAAACTACTCTGCTGCCATATGCCTTCATAAGTGGGTTTCTGGTGCTGAGCAGTCTCAGTGCGCTGCTTGTAGA CAGGCATTTGGATTCACTAGAAAGAGGCACAACTGTTATAATTGTGGACTTGTGCACTGCCATTCATGCAGTTCAAGGAA AGCATTAAGAGCTGCCCTGGCTCCTAATCCTGGGAAGCCATACCGTGTTTGCGATTCTTGTCATGCGAAGTTGAACAAGG TTATAGATTCTGGCAATAATAATAGGAGGAATGCTATGCCTCGTTTGTCAGGTGAAAACAAGGACAGATTAGAAAAGTCT GATCTGAGATTGACTAAATCAGCAGTGCCTTCTAATATGGATTTGATAAAGCAGCTAGATAGTAAGGCAGCCAAACAGGG GAAGAAGGCCGATACATTCTCTCTGGTTCGTGCCTCTCAAGCACCGTCTTTGCTACAGCTCAAAGATGTTGTCTTGTCTA CTGCTGTTGATCTGAAACGCACAGTTCCTAGACCTGTTCTTACACCATCTGGAGCAAGTTCCAGGTCTGTCGTGAGTTCC AGGTCTGTCTCCCCTTTCTCTAGAAGATCGAGCCCCCCTCGTTCAGCTACACCTATTCCAACAACATCAGGACTTTCCTT CTCAAAAAATATTTCTGATAGTCTGAAGAAGACAAATGAACTATTGAATCAAGAAGTGCTAAAGTTACGCGCTCAGGTTG AGACACTGAGACAGAGATGTGAACTGCAAGAATTAGAGGTTCAAAGGTCAGCAAAAAAGACTCAGGAAGCTATGTCACTG GCTGCTGAGGAATCTGCCAAATCTAAGGCTGCAAAAGAAGTTATAAAGTCACTTACAGCACAGCTCAAAGATCTGGCTGA GAGGCTTCCTCCTGGTATTTATGATGCTGAAAACATCAGACCTGCTTACGTGCCGAATGGTCTGGAGCCAAACGGCATCC ACCATCCAGACTTAAATGGGGAGCACCACACCAGAGCAGAGTCAATCAGTGGCTCTAGTTTAGCTTCTGTAGGACTTGAA TACTCTCTGATGAGTAGAATCGAGGGGACTTTGCCTGGAAGCTATGGTCTTTACCAGCAAAACCGCGGGCCTGTGACCAC CAACAGAACAGAAGATTACCCGGACGTCAAATTGCCTAATGGCAGTAGTGTGATTCAGGCAAGCAACAGTAGTGTGTCAG ATACTGTTGATGGTAGGGATTCTGGGAATTTCCAAGATGACGAGAGTGGTTCAAGATCAAGGAATGCTGTATCGCCTGCT GCTAGTAATCATGTTGAGGCAGAATGGATTGAACAGTATGAGCCCGGCGTCTATATAACACTGGTTGCCCTGCGTGATGG AACTCGAGATCTAAAGCGAGTGCGCTTCAGCCGGAGAAGATTTGGCGAGCACCAAGCAGAGACTTGGTGGTCAGAGAACC GCGAAAAGGTATACGAAAAGTACAATGTTCGAAGCACAGACAAGTCTACGGGCCAAGCATCACGCAGGGGAGAGGGTGCT GGTTCACCTGTTCTATAA
Protein sequence (LotjaGi5g1v0293400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADLVSHRNADRDIDQALIALKKGAQLLKYGRKGKPKFCPFRLSSDELSLIWISSSGEKSLKLSSISRIIPGQRTAVFQR YLRPEKDYLSFSLIYNHGKRSLDLICKDKVQAELWITGLKALISSGQGGRSKIDGWSDGGLCLDDSKDLTSSSPSESSVS ASHTQDTSSPDISVSVPNTSPKSFQPENTLNIERSHAPSNPSNMQVKGSSSDVFRVSVSSAPSTSSHGSAPDDYDALGDV YIWGEVICESVVKVGADKNGSYLSPRADILLPKPLESNVVLDVLQIACGVKHAALVSRQGEMFTWGEESGGRLGHGVGKN VVQPRLVEALASTTVDFVACGEFHTCAVTMAGELFTWGDGTHKAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHT ALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDK SRLGHGDKEARLEPTCVPSLIDHNFYRIACGHSLTAGLTTPGQVFTMGSTVYGQLGNPQSDGKLPCLVQDKLAGEPVEEI ACGAYHVVVLTSKNEVYTWGKGANGRLGHGDVEDRKAPTLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCAACR QAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDSCHAKLNKVIDSGNNNRRNAMPRLSGENKDRLEKS DLRLTKSAVPSNMDLIKQLDSKAAKQGKKADTFSLVRASQAPSLLQLKDVVLSTAVDLKRTVPRPVLTPSGASSRSVVSS RSVSPFSRRSSPPRSATPIPTTSGLSFSKNISDSLKKTNELLNQEVLKLRAQVETLRQRCELQELEVQRSAKKTQEAMSL AAEESAKSKAAKEVIKSLTAQLKDLAERLPPGIYDAENIRPAYVPNGLEPNGIHHPDLNGEHHTRAESISGSSLASVGLE YSLMSRIEGTLPGSYGLYQQNRGPVTTNRTEDYPDVKLPNGSSVIQASNSSVSDTVDGRDSGNFQDDESGSRSRNAVSPA ASNHVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYEKYNVRSTDKSTGQASRRGEGA GSPVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 1108 | 1101 | 0.0 | – | |
| PANTHER | 8 | 1108 | 1101 | 0.0 | – | |
| CDD | 12 | 124 | 113 | 1.39099E-50 | – | |
| Gene3D | 12 | 132 | 121 | 3.0E-22 | ||
| SUPERFAMILY | 13 | 123 | 111 | 2.32E-25 | – | |
| Pfam | 42 | 123 | 82 | 5.9E-7 | ||
| MobiDBLite | 147 | 230 | 84 | - | – | |
| MobiDBLite | 147 | 231 | 85 | - | – | |
| Gene3D | 184 | 457 | 274 | 5.9E-55 | ||
| SUPERFAMILY | 238 | 627 | 390 | 7.19E-94 | ||
| ProSiteProfiles | 238 | 299 | 62 | 8.635 | ||
| PRINTS | 283 | 296 | 14 | 4.2E-14 | ||
| ProSitePatterns | 286 | 296 | 11 | - | ||
| ProSiteProfiles | 300 | 351 | 52 | 13.981 | ||
| Pfam | 300 | 348 | 49 | 3.4E-8 | ||
| PRINTS | 302 | 318 | 17 | 4.2E-14 | ||
| Pfam | 352 | 403 | 52 | 2.8E-8 | ||
| ProSiteProfiles | 352 | 406 | 55 | 13.559 | ||
| PRINTS | 352 | 368 | 17 | 4.2E-14 | ||
| ProSitePatterns | 393 | 403 | 11 | - | ||
| PRINTS | 393 | 409 | 17 | 4.2E-14 | ||
| ProSiteProfiles | 407 | 458 | 52 | 13.378 | ||
| Pfam | 407 | 455 | 49 | 1.8E-13 | ||
| PRINTS | 409 | 423 | 15 | 4.2E-14 | ||
| ProSitePatterns | 445 | 455 | 11 | - | ||
| Gene3D | 458 | 630 | 173 | 2.9E-46 | ||
| Pfam | 469 | 516 | 48 | 1.5E-10 | ||
| ProSiteProfiles | 470 | 521 | 52 | 13.499 | ||
| PRINTS | 511 | 529 | 19 | 4.2E-14 | ||
| Pfam | 522 | 570 | 49 | 4.6E-7 | ||
| ProSiteProfiles | 522 | 573 | 52 | 13.559 | ||
| PRINTS | 569 | 590 | 22 | 4.2E-14 | ||
| ProSiteProfiles | 574 | 625 | 52 | 15.006 | ||
| Pfam | 575 | 622 | 48 | 1.5E-13 | ||
| SMART | 624 | 693 | 70 | 4.2E-19 | ||
| SUPERFAMILY | 626 | 700 | 75 | 3.98E-18 | ||
| Pfam | 626 | 692 | 67 | 4.4E-13 | ||
| ProSiteProfiles | 630 | 692 | 63 | 11.557 | ||
| Gene3D | 631 | 703 | 73 | 5.2E-16 | ||
| MobiDBLite | 697 | 717 | 21 | - | – | |
| MobiDBLite | 784 | 828 | 45 | - | – | |
| MobiDBLite | 787 | 828 | 42 | - | – | |
| Coils | 832 | 873 | 42 | - | – | |
| Pfam | 883 | 918 | 36 | 1.6E-18 | ||
| Coils | 888 | 908 | 21 | - | – | |
| MobiDBLite | 931 | 950 | 20 | - | – | |
| MobiDBLite | 973 | 1041 | 69 | - | – | |
| MobiDBLite | 974 | 988 | 15 | - | – | |
| MobiDBLite | 1001 | 1019 | 19 | - | – | |
| Pfam | 1046 | 1101 | 56 | 1.9E-29 | ||
| ProSiteProfiles | 1047 | 1102 | 56 | 36.491 | ||
| MobiDBLite | 1103 | 1125 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi5g1v0293400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…