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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001611
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 861 results. Now displaying 5 of 18 with 50 rows per page. This search has taken 5.545s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v0932650.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356561446|ref|XP_003548992.1| chr2 14734798 14736419 -
2 domain predictions
1 GO term
Lj2g3v1241150.1
n.a. PREDICTED: receptor-like protein kinase 2-like [Glycine max] gi|356502639|ref|XP_003520125.1| chr2 19650481 19655160 -
3 domain predictions
1 GO term
Lj2g3v1266090.2
n.a. Leucine-rich repeat receptor protein kinase EXS [Medicago truncatula] gi|357487463|ref|XP_003614019.1| chr2 20118911 20124267 +
2 domain predictions
1 GO term
Lj2g3v1350520.1
n.a. probable leucine-rich repeat receptor-like protein kinase At1g35710-like precursor [Glycine max] gi|359807163|ref|NP_001241099.1| chr2 21293084 21296216 +
2 domain predictions
1 GO term
Lj2g3v1353630.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497814|ref|XP_003517752.1| chr2 21342783 21349807 -
3 domain predictions
1 GO term
Lj2g3v1371320.1
n.a. Nucleotide-binding oligomerization domain-containing protein [Medicago truncatula] gi|357486129|ref|XP_003613352.1| chr2 21583337 21587858 +
2 domain predictions
1 GO term
Lj2g3v1437110.1
n.a. PREDICTED: leucine-rich repeat-containing protein 7-like [Glycine max] gi|356497728|ref|XP_003517711.1| chr2 22640062 22642733 -
3 domain predictions
1 GO term
Lj2g3v1534060.1
n.a. n.a. chr2 24065009 24074097 +
2 domain predictions
1 GO term
Lj2g3v1534070.1
n.a. PREDICTED: disease resistance protein RPM1-like [Glycine max] gi|356497605|ref|XP_003517650.1| chr2 24070110 24073994 -
2 domain predictions
1 GO term
Lj2g3v1534070.2
n.a. PREDICTED: disease resistance protein RPM1-like [Glycine max] gi|356497605|ref|XP_003517650.1| chr2 24070110 24074087 -
2 domain predictions
1 GO term
Lj2g3v1550210.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| chr2 24617165 24620297 +
2 domain predictions
1 GO term
Lj2g3v1550220.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502161948|ref|XP_004512338.1| chr2 24623507 24631322 +
2 domain predictions
1 GO term
Lj2g3v1550220.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502161948|ref|XP_004512338.1| chr2 24623507 24627465 +
2 domain predictions
1 GO term
Lj2g3v1550260.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| chr2 24647829 24651585 +
3 domain predictions
1 GO term
Lj2g3v1550260.2
n.a. Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| chr2 24647829 24651585 +
3 domain predictions
1 GO term
Lj2g3v1550290.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502161948|ref|XP_004512338.1| chr2 24661913 24665974 -
2 domain predictions
1 GO term
Lj2g3v1550300.1
n.a. n.a. chr2 24661913 24665646 +
2 domain predictions
1 GO term
Lj2g3v1550310.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Glycine max] gi|356546810|ref|XP_003541815.1| chr2 24667552 24668108 -
3 domain predictions
1 GO term
Lj2g3v1550330.1
n.a. n.a. chr2 24672572 24677456 +
2 domain predictions
1 GO term
Lj2g3v1550360.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502162249|ref|XP_004512441.1| chr2 24680573 24684084 -
3 domain predictions
1 GO term
Lj2g3v1550370.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502162249|ref|XP_004512441.1| chr2 24680573 24684084 -
3 domain predictions
1 GO term
Lj2g3v1560730.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502162249|ref|XP_004512441.1| chr2 24836475 24839335 +
3 domain predictions
1 GO term
Lj2g3v1588550.1
n.a. PREDICTED: leucine-rich repeat protein SHOC-2-like [Glycine max] gi|356538413|ref|XP_003537698.1| chr2 25230930 25234028 +
4 domain predictions
1 GO term
Lj2g3v1707560.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Cicer arietinum] gi|502161315|ref|XP_004512119.1| chr2 26400868 26405408 -
3 domain predictions
1 GO term
Lj2g3v1890920.1
n.a. F-box protein [Medicago truncatula] gi|357482823|ref|XP_003611698.1| chr2 28100082 28101879 +
2 domain predictions
1 GO term
Lj2g3v1984140.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2-like [Glycine max] gi|356495521|ref|XP_003516625.1| chr2 28971468 28975119 -
2 domain predictions
1 GO term
Lj2g3v1984370.1
n.a. PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1-like [Cicer arietinum] gi|502160581|ref|XP_004511796.1| chr2 29015057 29019497 -
3 domain predictions
1 GO term
Lj2g3v1984380.1
n.a. receptor-like protein kinase 3 precursor [Glycine max] gi|351726467|ref|NP_001235080.1| chr2 29015251 29019497 -
3 domain predictions
1 GO term
Lj2g3v2002570.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357481915|ref|XP_003611243.1| chr2 30362464 30365880 +
2 domain predictions
1 GO term
Lj2g3v2002860.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460-like [Cicer arietinum] gi|502160100|ref|XP_004511633.1| chr2 30521444 30524692 +
3 domain predictions
1 GO term
Lj2g3v2448220.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840-like isoform X1 [Cicer arietinum] gi|502129682|ref|XP_004500393.1| chr2 34598830 34608649 -
2 domain predictions
1 GO term
Lj2g3v2736520.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357492663|ref|XP_003616620.1| chr2 36318689 36319986 +
2 domain predictions
1 GO term
Lj2g3v2736530.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357492663|ref|XP_003616620.1| chr2 36318689 36319986 +
2 domain predictions
1 GO term
Lj2g3v2843040.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Cicer arietinum] gi|502097475|ref|XP_004491002.1| chr2 36979496 36982698 -
2 domain predictions
1 GO term
Lj2g3v2879650.1
n.a. DNA-directed RNA polymerase subunit beta [Medicago truncatula] gi|357493253|ref|XP_003616915.1| chr2 37547054 37547998 +
2 domain predictions
1 GO term
Lj2g3v2904830.1
n.a. CM0545.400.nc [Lotus japonicus] gi|164605529|dbj|BAF98595.1| chr2 37945168 37947921 +
5 domain predictions
1 GO term
Lj2g3v2904840.1
n.a. CM0545.410.nc [Lotus japonicus] gi|164605528|dbj|BAF98594.1| chr2 37950408 37951388 +
5 domain predictions
1 GO term
Lj2g3v2904850.1
n.a. CM0545.410.nc [Lotus japonicus] gi|164605528|dbj|BAF98594.1| chr2 37951568 37953181 +
5 domain predictions
1 GO term
Lj2g3v2904860.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357493511|ref|XP_003617044.1| chr2 37956427 37959713 +
4 domain predictions
1 GO term
Lj2g3v2904870.1
n.a. CM0545.400.nc [Lotus japonicus] gi|164605529|dbj|BAF98595.1| chr2 37956427 37959713 +
4 domain predictions
1 GO term
Lj2g3v2974840.1
n.a. PREDICTED: probable inactive receptor kinase At5g10020-like [Glycine max] gi|356553668|ref|XP_003545175.1| chr2 38456398 38459648 -
2 domain predictions
1 GO term
Lj2g3v2984880.1
n.a. PREDICTED: probable inactive receptor kinase At5g10020-like [Glycine max] gi|356499271|ref|XP_003518465.1| chr2 38477835 38483383 +
2 domain predictions
1 GO term
Lj2g3v2984880.2
n.a. PREDICTED: probable inactive receptor kinase At5g10020-like [Glycine max] gi|356499271|ref|XP_003518465.1| chr2 38478010 38485134 +
2 domain predictions
1 GO term
Lj2g3v2985960.1
n.a. somatic embryogenesis receptor kinase 1-like precursor [Glycine max] gi|359807462|ref|NP_001241394.1| chr2 38538567 38541940 -
3 domain predictions
1 GO term
Lj2g3v3058590.1
n.a. PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3-like [Glycine max] gi|356553634|ref|XP_003545159.1| chr2 39369594 39375372 -
4 domain predictions
1 GO term
Lj2g3v3058600.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357493481|ref|XP_003617029.1| chr2 39384062 39387090 +
3 domain predictions
1 GO term
Lj2g3v3223910.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356561446|ref|XP_003548992.1| chr2 41179304 41182739 +
4 domain predictions
1 GO term
Lj2g3v3223920.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356561450|ref|XP_003548994.1| chr2 41179304 41182435 +
4 domain predictions
1 GO term
Lj2g3v3223950.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357492251|ref|XP_003616414.1| chr2 41185140 41188544 +
3 domain predictions
1 GO term
Lj2g3v3223960.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356561444|ref|XP_003548991.1| chr2 41189589 41190533 +
2 domain predictions
1 GO term