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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013210
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 576 results. Now displaying 5 of 12 with 50 rows per page. This search has taken 7.083s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v1120510.2
n.a. Receptor-like protein kinase HAIKU2 [Medicago truncatula] gi|357446137|ref|XP_003593346.1| chr4 16859760 16863913 +
2 domain predictions
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Lj4g3v1287400.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460-like [Cicer arietinum] gi|502160100|ref|XP_004511633.1| chr4 19013138 19016053 -
2 domain predictions
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Lj4g3v1313820.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930-like [Glycine max] gi|356514131|ref|XP_003525760.1| chr4 19191299 19195034 -
2 domain predictions
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Lj4g3v1463040.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540-like [Glycine max] gi|356562708|ref|XP_003549611.1| chr4 22517029 22522025 +
2 domain predictions
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Lj4g3v1463050.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540-like [Glycine max] gi|356562708|ref|XP_003549611.1| chr4 22517095 22522701 +
2 domain predictions
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Lj4g3v1474100.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356513621|ref|XP_003525510.1| chr4 22554084 22558417 +
2 domain predictions
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Lj4g3v1474100.2
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356513621|ref|XP_003525510.1| chr4 22554106 22558417 +
2 domain predictions
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Lj4g3v1474110.1
n.a. n.a. chr4 22554275 22559088 -
2 domain predictions
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Lj4g3v1614610.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1-like isoform X1 [Cicer arietinum] gi|502152128|ref|XP_004508778.1| chr4 23723873 23728805 +
2 domain predictions
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Lj4g3v1683150.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g74360-like [Cicer arietinum] gi|502151983|ref|XP_004508707.1| chr4 24372558 24376499 +
2 domain predictions
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Lj4g3v1802320.1
n.a. PREDICTED: probable inactive receptor kinase At2g26730-like [Cicer arietinum] gi|502151673|ref|XP_004508557.1| chr4 25494010 25497836 +
2 domain predictions
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Lj4g3v2002980.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357479973|ref|XP_003610272.1| chr4 27858820 27859192 -
2 domain predictions
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Lj4g3v2018260.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g23950-like [Glycine max] gi|356498787|ref|XP_003518230.1| chr4 27962193 27966683 +
2 domain predictions
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Lj4g3v2253800.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357492663|ref|XP_003616620.1| chr4 31333867 31340828 +
2 domain predictions
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Lj4g3v2253800.2
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357492663|ref|XP_003616620.1| chr4 31333867 31340305 +
2 domain predictions
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Lj4g3v2401000.1
n.a. PREDICTED: serine/threonine-protein kinase BRI1-like 2-like [Glycine max] gi|356528178|ref|XP_003532682.1| chr4 33284305 33288606 +
2 domain predictions
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Lj4g3v2578250.1
n.a. Rhg4-like receptor kinase II [Glycine max] gi|90655934|gb|ABD96566.1| chr4 34603303 34607390 +
2 domain predictions
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Lj4g3v2604750.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Cicer arietinum] gi|502140673|ref|XP_004504296.1| chr4 35348135 35354046 +
2 domain predictions
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Lj4g3v2717090.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357519395|ref|XP_003629986.1| chr4 36579348 36579704 +
2 domain predictions
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Lj4g3v2824380.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290-like [Glycine max] gi|356512695|ref|XP_003525052.1| chr4 37785573 37791823 -
2 domain predictions
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Lj4g3v2846230.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g63710-like [Glycine max] gi|356527105|ref|XP_003532154.1| chr4 38073708 38079085 -
2 domain predictions
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Lj4g3v2951110.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like isoform X1 [Cicer arietinum] gi|502139432|ref|XP_004503764.1| chr4 39039562 39043611 +
2 domain predictions
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Lj4g3v2951110.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like isoform X1 [Cicer arietinum] gi|502139432|ref|XP_004503764.1| chr4 39039562 39043611 +
2 domain predictions
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Lj4g3v2951110.3
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like isoform X1 [Cicer arietinum] gi|502139432|ref|XP_004503764.1| chr4 39039562 39043051 +
2 domain predictions
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Lj4g3v3002540.1
n.a. PREDICTED: probable inactive receptor kinase At4g23740-like [Glycine max] gi|356528976|ref|XP_003533073.1| chr4 39694982 39698811 +
2 domain predictions
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Lj4g3v3042720.1
n.a. PREDICTED: leucine-rich repeat extensin-like protein 6-like [Glycine max] gi|356513183|ref|XP_003525293.1| chr4 40619933 40621932 +
2 domain predictions
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Lj4g3v3093870.1
n.a. PREDICTED: leucine-rich repeat extensin-like protein 3-like [Cicer arietinum] gi|502163490|ref|XP_004512856.1| chr4 40995121 40998101 +
2 domain predictions
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Lj4g3v3113770.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502138204|ref|XP_004503323.1| chr4 41755084 41759231 -
2 domain predictions
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Lj5g3v0196810.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RLK-like [Glycine max] gi|356511425|ref|XP_003524427.1| chr5 1694570 1698020 +
2 domain predictions
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Lj5g3v0292820.1
n.a. Leucine-rich repeat family protein [Theobroma cacao] gi|508722485|gb|EOY14382.1| chr5 2607373 2609261 -
2 domain predictions
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Lj5g3v0705400.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400-like [Cicer arietinum] gi|502122129|ref|XP_004497593.1| chr5 10230419 10233366 -
2 domain predictions
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Lj5g3v1208370.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356535310|ref|XP_003536190.1| chr5 19759251 19762670 -
2 domain predictions
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Lj5g3v1262930.1
n.a. Receptor kinase-like protein [Medicago truncatula] gi|357505893|ref|XP_003623235.1| chr5 20109734 20118416 -
2 domain predictions
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Lj5g3v1303360.1
n.a. Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|357441259|ref|XP_003590907.1| chr5 20341305 20355738 -
2 domain predictions
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Lj5g3v1692560.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL1-like [Cicer arietinum] gi|502118010|ref|XP_004496056.1| chr5 23963833 23966980 -
2 domain predictions
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Lj5g3v1853270.1
n.a. PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820-like [Cicer arietinum] gi|502118661|ref|XP_004496359.1| chr5 26495178 26498927 -
2 domain predictions
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Lj5g3v1875170.1
n.a. PREDICTED: somatic embryogenesis receptor kinase 1-like [Glycine max] gi|356576127|ref|XP_003556185.1| chr5 26834164 26839717 +
2 domain predictions
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Lj5g3v1986540.1
n.a. Receptor protein kinase-like protein, partial [Medicago truncatula] gi|357444031|ref|XP_003592293.1| chr5 27874103 27875176 -
2 domain predictions
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Lj5g3v1988630.1
n.a. Receptor protein kinase-like protein, partial [Medicago truncatula] gi|357444031|ref|XP_003592293.1| chr5 27893443 27894450 -
2 domain predictions
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Lj5g3v2013670.1
n.a. Receptor protein kinase-like protein, partial [Medicago truncatula] gi|357444031|ref|XP_003592293.1| chr5 28329560 28330253 +
2 domain predictions
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Lj5g3v2013680.1
n.a. Receptor protein kinase-like protein, partial [Medicago truncatula] gi|357444031|ref|XP_003592293.1| chr5 28329560 28344520 +
2 domain predictions
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Lj5g3v2044980.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL2-like [Cicer arietinum] gi|502119538|ref|XP_004496653.1| chr5 28903663 28912150 +
2 domain predictions
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Lj5g3v2044980.2
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL2-like [Cicer arietinum] gi|502119538|ref|XP_004496653.1| chr5 28904936 28912150 +
2 domain predictions
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Lj5g3v2057440.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357444307|ref|XP_003592431.1| chr5 29653388 29658092 -
2 domain predictions
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Lj5g3v2110870.2
n.a. somatic embryogenesis receptor kinase 1-like precursor [Glycine max] gi|359806787|ref|NP_001241049.1| chr5 30176038 30178683 -
2 domain predictions
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Lj5g3v2113420.1
n.a. PREDICTED: receptor protein kinase-like protein At4g34220-like, partial [Glycine max] gi|356536160|ref|XP_003536607.1| chr5 30429914 30434170 +
2 domain predictions
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Lj5g3v2113590.1
n.a. probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like precursor [Glycine max] gi|359806182|ref|NP_001241201.1| chr5 30511700 30513682 -
2 domain predictions
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Lj5g3v2179770.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Glycine max] gi|356574230|ref|XP_003555253.1| chr5 31302450 31306142 +
2 domain predictions
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Lj5g3v2179880.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Cicer arietinum] gi|502120681|ref|XP_004497046.1| chr5 31356169 31359202 -
2 domain predictions
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Lj5g3v2179880.2
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Glycine max] gi|356574230|ref|XP_003555253.1| chr5 31356169 31359202 -
2 domain predictions
 –