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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR015424
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We have found 379 results. Now displaying 8 of 8 with 50 rows per page. This search has taken 5.486s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi6g1v0085500.1
n.a. Aminotransferase; TAIR: AT2G22250.1 aspartate aminotransferase; Swiss-Prot: sp|E9L7A5|PAT_PETHY Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; TrEMBL-Plants: tr|A0A151U932|A0A151U932_CAJCA Aspartate aminotransferase; Found in the gene: LotjaGi6g1v0085500 LjG1.1_chr6 16996631 17000796 +
2 domain predictions
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LotjaGi6g1v0085500.2
n.a. Aminotransferase; TAIR: AT2G22250.1 aspartate aminotransferase; Swiss-Prot: sp|E9L7A5|PAT_PETHY Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; TrEMBL-Plants: tr|I1LN02|I1LN02_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0085500 LjG1.1_chr6 16996954 17000429 +
2 domain predictions
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LotjaGi6g1v0106300.1
n.a. Aminotransferase like protein; TAIR: AT2G38400.1 alanine:glyoxylate aminotransferase 3; Swiss-Prot: sp|Q94AL9|AGT22_ARATH Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; TrEMBL-Plants: tr|A0A072UX79|A0A072UX79_MEDTR Alanine-glyoxylate aminotransferase-like protein; Found in the gene: LotjaGi6g1v0106300 LjG1.1_chr6 23748381 23752412 -
2 domain predictions
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LotjaGi6g1v0183300.1
n.a. Alanine:glyoxylate aminotransferase; TAIR: AT2G13360.1 alanine:glyoxylate aminotransferase; Swiss-Prot: sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase; TrEMBL-Plants: tr|G7J013|G7J013_MEDTR Serine-glyoxylate aminotransferase-like protein; Found in the gene: LotjaGi6g1v0183300 LjG1.1_chr6 47607475 47612817 -
2 domain predictions
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LotjaGi6g1v0183300.2
n.a. Alanine:glyoxylate aminotransferase; TAIR: AT2G13360.1 alanine:glyoxylate aminotransferase; Swiss-Prot: sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase; TrEMBL-Plants: tr|G7J013|G7J013_MEDTR Serine-glyoxylate aminotransferase-like protein; Found in the gene: LotjaGi6g1v0183300 LjG1.1_chr6 47608353 47611368 -
2 domain predictions
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LotjaGi6g1v0183300.3
n.a. Alanine:glyoxylate aminotransferase; TAIR: AT2G13360.1 alanine:glyoxylate aminotransferase; Swiss-Prot: sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase; TrEMBL-Plants: tr|G7J013|G7J013_MEDTR Serine-glyoxylate aminotransferase-like protein; Found in the gene: LotjaGi6g1v0183300 LjG1.1_chr6 47608353 47611368 -
2 domain predictions
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LotjaGi6g1v0183300.4
n.a. Alanine:glyoxylate aminotransferase; TAIR: AT2G13360.1 alanine:glyoxylate aminotransferase; Swiss-Prot: sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase; TrEMBL-Plants: tr|G7J013|G7J013_MEDTR Serine-glyoxylate aminotransferase-like protein; Found in the gene: LotjaGi6g1v0183300 LjG1.1_chr6 47608353 47611368 -
2 domain predictions
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LotjaGi6g1v0203200_LC.1
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A0S3SN97|A0A0S3SN97_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0203200_LC LjG1.1_chr6 50056703 50059238 -
2 domain predictions
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LotjaGi6g1v0203300.1
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151S6Z1|A0A151S6Z1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi6g1v0203300 LjG1.1_chr6 50065269 50067827 -
2 domain predictions
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LotjaGi6g1v0204600.1
n.a. Aminotransferase; TAIR: AT4G33680.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q93ZN9|DAPAT_ARATH LL-diaminopimelate aminotransferase, chloroplastic; TrEMBL-Plants: tr|G7JTY4|G7JTY4_MEDTR LL-diaminopimelate aminotransferase; Found in the gene: LotjaGi6g1v0204600 LjG1.1_chr6 50188078 50195380 +
2 domain predictions
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LotjaGi6g1v0204600.2
n.a. Aminotransferase; TAIR: AT4G33680.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q10MQ2|DAPAT_ORYSJ Probable LL-diaminopimelate aminotransferase, chloroplastic; TrEMBL-Plants: tr|G7JTY4|G7JTY4_MEDTR LL-diaminopimelate aminotransferase; Found in the gene: LotjaGi6g1v0204600 LjG1.1_chr6 50188631 50194845 +
2 domain predictions
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LotjaGi6g1v0274400.1
n.a. Tyrosine decarboxylase; TAIR: AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2; TrEMBL-Plants: tr|V7AQJ2|V7AQJ2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0274400 LjG1.1_chr6 59129157 59131248 -
2 domain predictions
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LotjaGi6g1v0274400.2
n.a. Tyrosine decarboxylase; TAIR: AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2; TrEMBL-Plants: tr|V7AQJ2|V7AQJ2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0274400 LjG1.1_chr6 59129541 59131097 -
2 domain predictions
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LotjaGi6g1v0275200.1
n.a. Cysteine desulfurase family protein; TAIR: AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase; Swiss-Prot: sp|Q93WX6|CNIF1_ARATH Cysteine desulfurase 1, chloroplastic; TrEMBL-Plants: tr|A0A151REY6|A0A151REY6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0275200 LjG1.1_chr6 59196656 59201247 -
2 domain predictions
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LotjaGi6g1v0275200.2
n.a. Cysteine desulfurase family protein; TAIR: AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase; Swiss-Prot: sp|Q93WX6|CNIF1_ARATH Cysteine desulfurase 1, chloroplastic; TrEMBL-Plants: tr|A0A151REY6|A0A151REY6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0275200 LjG1.1_chr6 59197312 59200896 -
2 domain predictions
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LotjaGi6g1v0275200.3
n.a. Cysteine desulfurase family protein; TAIR: AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase; Swiss-Prot: sp|Q93WX6|CNIF1_ARATH Cysteine desulfurase 1, chloroplastic; TrEMBL-Plants: tr|A0A151REY6|A0A151REY6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0275200 LjG1.1_chr6 59197312 59200917 -
2 domain predictions
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LotjaGi6g1v0275200.4
n.a. Cysteine desulfurase family protein; TAIR: AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase; Swiss-Prot: sp|Q93WX6|CNIF1_ARATH Cysteine desulfurase 1, chloroplastic; TrEMBL-Plants: tr|A0A151REY6|A0A151REY6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0275200 LjG1.1_chr6 59197312 59200917 -
2 domain predictions
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LotjaGi6g1v0314300.1
n.a. Serine hydroxymethyltransferase; TAIR: AT4G32520.1 serine hydroxymethyltransferase 3; Swiss-Prot: sp|Q94JQ3|GLYP3_ARATH Serine hydroxymethyltransferase 3, chloroplastic; TrEMBL-Plants: tr|V7BSE7|V7BSE7_PHAVU Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0314300 LjG1.1_chr6 63253453 63257405 +
2 domain predictions
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LotjaGi6g1v0314300.2
n.a. Serine hydroxymethyltransferase; TAIR: AT4G32520.1 serine hydroxymethyltransferase 3; Swiss-Prot: sp|Q94JQ3|GLYP3_ARATH Serine hydroxymethyltransferase 3, chloroplastic; TrEMBL-Plants: tr|A0A0R0H289|A0A0R0H289_SOYBN Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0314300 LjG1.1_chr6 63254160 63256938 +
2 domain predictions
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LotjaGi6g1v0354600.1
n.a. Aminotransferase; TAIR: AT2G13810.1 AGD2-like defense response protein 1; Swiss-Prot: sp|Q9ZQI7|ALD1_ARATH Aminotransferase ALD1; TrEMBL-Plants: tr|W0BWR0|W0BWR0_LOTJA L,L-diaminopimelate aminotransferase; Found in the gene: LotjaGi6g1v0354600 LjG1.1_chr6 66646383 66650704 -
2 domain predictions
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LotjaGi6g1v0354600.2
n.a. Aminotransferase; TAIR: AT2G13810.1 AGD2-like defense response protein 1; Swiss-Prot: sp|Q9ZQI7|ALD1_ARATH Aminotransferase ALD1; TrEMBL-Plants: tr|W0BWR0|W0BWR0_LOTJA L,L-diaminopimelate aminotransferase; Found in the gene: LotjaGi6g1v0354600 LjG1.1_chr6 66646709 66650300 -
2 domain predictions
 –
LotjaGi6g1v0354600.3
n.a. Aminotransferase; TAIR: AT2G13810.1 AGD2-like defense response protein 1; Swiss-Prot: sp|Q9ZQI7|ALD1_ARATH Aminotransferase ALD1; TrEMBL-Plants: tr|W0BWR0|W0BWR0_LOTJA L,L-diaminopimelate aminotransferase; Found in the gene: LotjaGi6g1v0354600 LjG1.1_chr6 66646709 66650443 -
2 domain predictions
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LotjaGi6g1v0355800.1
n.a. Glutamate decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A151T7X1|A0A151T7X1_CAJCA Histidine decarboxylase; Found in the gene: LotjaGi6g1v0355800 LjG1.1_chr6 66749385 66754870 +
2 domain predictions
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LotjaGi6g1v0355800.2
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A0B2QYV8|A0A0B2QYV8_GLYSO Histidine decarboxylase; Found in the gene: LotjaGi6g1v0355800 LjG1.1_chr6 66749461 66754422 +
2 domain predictions
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LotjaGi6g1v0355800.3
n.a. Histidine decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A0B2QYV8|A0A0B2QYV8_GLYSO Histidine decarboxylase; Found in the gene: LotjaGi6g1v0355800 LjG1.1_chr6 66750471 66753995 +
2 domain predictions
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LotjaGi6g1v0355800.4
n.a. Glutamate decarboxylase; TAIR: AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1; TrEMBL-Plants: tr|A0A0L9VG18|A0A0L9VG18_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0355800 LjG1.1_chr6 66751967 66753995 +
2 domain predictions
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LotjaGi6g1v0361500.1
n.a. Serine hydroxymethyltransferase; TAIR: AT1G22020.1 serine hydroxymethyltransferase 6; Swiss-Prot: sp|Q9LM59|GLYC6_ARATH Serine hydroxymethyltransferase 6; TrEMBL-Plants: tr|G7IPE1|G7IPE1_MEDTR Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0361500 LjG1.1_chr6 67358425 67363820 -
2 domain predictions
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LotjaGi6g1v0361500.2
n.a. Serine hydroxymethyltransferase; TAIR: AT1G22020.1 serine hydroxymethyltransferase 6; Swiss-Prot: sp|Q9LM59|GLYC6_ARATH Serine hydroxymethyltransferase 6; TrEMBL-Plants: tr|G7IPE1|G7IPE1_MEDTR Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0361500 LjG1.1_chr6 67360697 67363495 -
2 domain predictions
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LotjaGi6g1v0361500.3
n.a. Serine hydroxymethyltransferase; TAIR: AT1G22020.1 serine hydroxymethyltransferase 6; Swiss-Prot: sp|Q9LM59|GLYC6_ARATH Serine hydroxymethyltransferase 6; TrEMBL-Plants: tr|A0A0R0IP64|A0A0R0IP64_SOYBN Serine hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0361500 LjG1.1_chr6 67360697 67363495 -
2 domain predictions
 –