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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR030381
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We have found 79 results. Now displaying 2 of 2 with 50 rows per page. This search has taken 6.000s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi3g1v0073000.1
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151SN43|A0A151SN43_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi3g1v0073000 LjG1.1_chr3 7996556 8005092 -
2 domain predictions
1 GO term
LotjaGi3g1v0073000.2
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151SN43|A0A151SN43_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi3g1v0073000 LjG1.1_chr3 7997406 8004885 -
2 domain predictions
1 GO term
LotjaGi3g1v0073000.3
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151SN43|A0A151SN43_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi3g1v0073000 LjG1.1_chr3 7997406 8004885 -
2 domain predictions
1 GO term
LotjaGi3g1v0073000.4
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151SN43|A0A151SN43_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi3g1v0073000 LjG1.1_chr3 7997406 8004888 -
2 domain predictions
1 GO term
LotjaGi3g1v0395300.1
n.a. Dynamin, putative; TAIR: AT3G61760.1 DYNAMIN-like 1B; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0S3SYT0|A0A0S3SYT0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0395300 LjG1.1_chr3 79523901 79531554 -
2 domain predictions
1 GO term
LotjaGi3g1v0395300.2
n.a. Dynamin; TAIR: AT3G61760.1 DYNAMIN-like 1B; Swiss-Prot: sp|Q84XF3|DRP1B_ARATH Dynamin-related protein 1B; TrEMBL-Plants: tr|A0A0L9T6L3|A0A0L9T6L3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0395300 LjG1.1_chr3 79524419 79531313 -
2 domain predictions
1 GO term
LotjaGi3g1v0395300.3
n.a. Dynamin, putative; TAIR: AT3G61760.1 DYNAMIN-like 1B; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0S3SYT0|A0A0S3SYT0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0395300 LjG1.1_chr3 79524419 79531313 -
2 domain predictions
1 GO term
LotjaGi4g1v0001200.1
n.a. Dynamin family protein; TAIR: AT1G59610.1 dynamin-like 3; Swiss-Prot: sp|Q9LQ55|DRP2B_ARATH Dynamin-2B; TrEMBL-Plants: tr|I1MQT0|I1MQT0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0001200 LjG1.1_chr4 232251 267769 +
2 domain predictions
1 GO term
LotjaGi4g1v0009500.1
n.a. EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|G7K8N7|G7K8N7_MEDTR Calcium-binding EF hand protein; Found in the gene: LotjaGi4g1v0009500 LjG1.1_chr4 1264748 1269728 -
2 domain predictions
1 GO term
LotjaGi4g1v0009700.1
n.a. EH domain-containing protein 1; TAIR: AT4G05520.1 EPS15 homology domain 2; Swiss-Prot: sp|B3LF48|EHD2_ARATH EH domain-containing protein 2; TrEMBL-Plants: tr|A0A0B2R9H2|A0A0B2R9H2_GLYSO EH domain-containing protein 1; Found in the gene: LotjaGi4g1v0009700 LjG1.1_chr4 1278449 1283227 -
2 domain predictions
1 GO term
LotjaGi4g1v0032700.1
n.a. Dynamin family protein, putative, expressed; TAIR: AT3G19720.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q84N64|ARC5_ARATH Dynamin-like protein ARC5; TrEMBL-Plants: tr|A0A072UN67|A0A072UN67_MEDTR Dynamin-related protein 5B-2; Found in the gene: LotjaGi4g1v0032700 LjG1.1_chr4 3993338 4004367 -
2 domain predictions
1 GO term
LotjaGi4g1v0032700.2
n.a. Dynamin family protein, putative, expressed; TAIR: AT3G19720.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q84N64|ARC5_ARATH Dynamin-like protein ARC5; TrEMBL-Plants: tr|A0A072UN67|A0A072UN67_MEDTR Dynamin-related protein 5B-2; Found in the gene: LotjaGi4g1v0032700 LjG1.1_chr4 3996500 4004237 -
2 domain predictions
1 GO term
LotjaGi4g1v0040300.1
n.a. Dynamin, putative; TAIR: AT4G33650.1 dynamin-related protein 3A; Swiss-Prot: sp|Q8S944|DRP3A_ARATH Dynamin-related protein 3A; TrEMBL-Plants: tr|K7L2I2|K7L2I2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0040300 LjG1.1_chr4 4757486 4766768 +
2 domain predictions
1 GO term
LotjaGi4g1v0191000.1
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151R3B5|A0A151R3B5_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi4g1v0191000 LjG1.1_chr4 43720590 43726033 +
2 domain predictions
1 GO term
LotjaGi4g1v0381500_LC.2
n.a. Dynamin family protein; TAIR: AT1G60500.1 Dynamin related protein 4C; Swiss-Prot: sp|Q9ZP55|DRP4C_ARATH Dynamin-related protein 4C; TrEMBL-Plants: tr|G7L7C0|G7L7C0_MEDTR Dynamin 4C-like protein; Found in the gene: LotjaGi4g1v0381500_LC LjG1.1_chr4 76039858 76042307 -
2 domain predictions
1 GO term
LotjaGi4g1v0381500_LC.4
n.a. Dynamin family protein; TAIR: AT1G60500.1 Dynamin related protein 4C; Swiss-Prot: sp|Q9ZP55|DRP4C_ARATH Dynamin-related protein 4C; TrEMBL-Plants: tr|G7L7C0|G7L7C0_MEDTR Dynamin 4C-like protein; Found in the gene: LotjaGi4g1v0381500_LC LjG1.1_chr4 76039860 76042443 -
2 domain predictions
1 GO term
LotjaGi4g1v0381600_LC.1
n.a. Dynamin family protein; TAIR: AT1G60500.1 Dynamin related protein 4C; Swiss-Prot: sp|Q9ZP55|DRP4C_ARATH Dynamin-related protein 4C; TrEMBL-Plants: tr|K7KQK4|K7KQK4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0381600_LC LjG1.1_chr4 76049351 76049838 -
2 domain predictions
1 GO term
LotjaGi4g1v0381600_LC.2
n.a. Dynamin-related protein; TAIR: AT1G60500.1 Dynamin related protein 4C; Swiss-Prot: sp|Q9ZP55|DRP4C_ARATH Dynamin-related protein 4C; TrEMBL-Plants: tr|V7CMQ4|V7CMQ4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0381600_LC LjG1.1_chr4 76049351 76049926 -
2 domain predictions
1 GO term
LotjaGi4g1v0435900.1
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|I1K693|I1K693_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0435900 LjG1.1_chr4 80900049 80905871 +
2 domain predictions
1 GO term
LotjaGi4g1v0435900.2
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|I1K693|I1K693_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0435900 LjG1.1_chr4 80900505 80905485 +
2 domain predictions
1 GO term
LotjaGi4g1v0435900.3
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0B2Q5E1|A0A0B2Q5E1_GLYSO Dynamin-related protein 5A; Found in the gene: LotjaGi4g1v0435900 LjG1.1_chr4 80900505 80905485 +
2 domain predictions
1 GO term
LotjaGi4g1v0457600.1
n.a. Dynamin; TAIR: AT1G14830.1 DYNAMIN-like 1C; Swiss-Prot: sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C; TrEMBL-Plants: tr|G7LBF4|G7LBF4_MEDTR Dynamin-like protein 1E; Found in the gene: LotjaGi4g1v0457600 LjG1.1_chr4 82886459 82894088 +
2 domain predictions
1 GO term
LotjaGi4g1v0457600.2
n.a. Dynamin; TAIR: AT1G14830.1 DYNAMIN-like 1C; Swiss-Prot: sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C; TrEMBL-Plants: tr|G7LBF4|G7LBF4_MEDTR Dynamin-like protein 1E; Found in the gene: LotjaGi4g1v0457600 LjG1.1_chr4 82886910 82893523 +
2 domain predictions
1 GO term
LotjaGi5g1v0195200_LC.1
n.a. Dynamin family protein; TAIR: AT1G60500.1 Dynamin related protein 4C; Swiss-Prot: sp|Q9ZP55|DRP4C_ARATH Dynamin-related protein 4C; TrEMBL-Plants: tr|A0A0R0IKS3|A0A0R0IKS3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0195200_LC LjG1.1_chr5 49064248 49064822 -
2 domain predictions
1 GO term
LotjaGi6g1v0154400.1
n.a. EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|I1N0J5|I1N0J5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0154400 LjG1.1_chr6 43264414 43271082 -
2 domain predictions
1 GO term
LotjaGi6g1v0154400.2
n.a. EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|A0A199W5Q7|A0A199W5Q7_ANACO EH domain-containing protein 1; Found in the gene: LotjaGi6g1v0154400 LjG1.1_chr6 43264809 43270745 -
2 domain predictions
1 GO term
LotjaGi6g1v0288500.1
n.a. EH domain-containing protein 1; TAIR: AT4G05520.1 EPS15 homology domain 2; Swiss-Prot: sp|B3LF48|EHD2_ARATH EH domain-containing protein 2; TrEMBL-Plants: tr|I1MFL9|I1MFL9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0288500 LjG1.1_chr6 60548068 60552537 -
2 domain predictions
1 GO term
LotjaGi6g1v0348900.1
n.a. Dynamin, putative; TAIR: AT4G33650.1 dynamin-related protein 3A; Swiss-Prot: sp|Q8S944|DRP3A_ARATH Dynamin-related protein 3A; TrEMBL-Plants: tr|I1ME12|I1ME12_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0348900 LjG1.1_chr6 66157093 66167141 -
2 domain predictions
1 GO term
LotjaGi6g1v0348900.2
n.a. Dynamin, putative; TAIR: AT4G33650.1 dynamin-related protein 3A; Swiss-Prot: sp|Q8S944|DRP3A_ARATH Dynamin-related protein 3A; TrEMBL-Plants: tr|V7BTI1|V7BTI1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0348900 LjG1.1_chr6 66158641 66166872 -
2 domain predictions
1 GO term