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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0181100 |
| Transcript ID | LotjaGi6g1v0181100.3 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|I1N146|I1N146_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:47307429..47315531) extracted from Lotus japonicus Gifu genome v1.2.
TGTAGGGGTGCTGCTGACTAGCAAATCAGGACAGAAGTATCAGTTTCTGCAGAACTAGTGGTTCCATGGTTGTTAAAAAA AAATTCCCCTCTGATTCTAGCTGCTTCTGTAGTGGACTAAATATTTCATTTCCAAATAGAAAAGAGTGTTGGATAATGAT CTTATTGTAGTAAATTATGTCATAAAGTTGTCTTTTAAATTTTCATGTGTTGATATGCATTTATTCTATTTTTGTAGTTT GGTTGCCAAATATGCTGCTGACTATACTGACTATGCTTCTTTTCATATCTGAACTACAGGCCATTACTGCATTGAAGAAA GGGGCTTACTTGCTCAAGTATGGAAGAAGGGGGAAGCCAAAGTTTTGCCCCTTCCGGCTTTCCAATGTGAGTTTTGTACT CCCTCCCTCTGCCATATGTGTGTGTGTGTGTGTGTGTGTATTATACGAGAAATAATTTCGTATGTAAGAGTTAGAGGAGT AAATCTTAACCACTAAATGTAGTTTCACCAGTCATCACTGTAACATTCGTGATGGAAATTTTGGGGGTGGGGTGGAGTCC TCTCTCAATCATGAGACTGATTATATCTGTGTTAGACACCTTGGGAAGCTTTGCCTTGCCAAAAATAGTTAATTCTTGTT AAAGGAAGCAATCTAATCTGCATAACTAGAATTAAAATTTGGACTTAAGCAAATCTGCCGTTACCTTTATGACCATATCA AGCTTTGCTAAACGCTGTGGTTATTTGGGATTTGGCTACTTATAGAATCGGCTTGCTAGCATTCATTGCTTTGAAGTCTT ATGAATTTTCTTATTGCTATAATTTTATTGTGGCTTATTATGCTTCACCTTCAATCCATTTTTTTTCTATCTTACATATA AAACATTTGTGTCTTCATCTTACCACTTTAGCTTGGGGGGGGGGGGGTAATTGCTTTATTTCATGTTATCAGAGCCTCAT TGATCAAGTGGTCAGGAATTTTATCGCTGACACCTCTCCCATTCTCAAAATAAAAAAATTGAATTTCAGTACAAAGTTAG TAGAGCTATGCATAATTCATGATTTAAGCGTAAAGGACTCTTGCATAAGGAAGATTGTTAGATAACCATTCACGAGCTTT CATCTAATGGCTTAGGTTTTAAGGATTTTTGAATCTTGAGTCTTGACATATTATTGGAGTCTATGTGATCAAGTGATTTA GGAGTTTGATCCTTGCTGACCCGATCCTTCTAAATAATAGTTGATTTTCAAAATGAGCTTGCACATTATGCACACATCAA CCCGGAAGGGCTGTAGCTTGGGGGAGCATGTTAGATATTTAAAATAATTTGTGTTCCTTCAATTTAGAGCTTAAGCTTTT GGGTGTAATTGGTTGATGATAGTTTCCATGTATTGTCTTTTGTCAGAAGTTGTCTGGTTGTCAAAAGTTAAAAAATGTTT ATTTTTTCTATTGCTTTCAGGACGAATCTGTCTTGATATGGTTCTCAGGAAAAGAAGAGAAACGTCTTAAACTAACTAAT GTTTCTAGAATTATATCTGGACAACGAACGGTAAGTCCTTTAAAATGACAATAATCATTGGTGCTATTTCACTGCTTCAG ATTTAACCAATGGTGCCATGTCGTATTTAGATAATTAATTGTTGTAAGATATTTCTGTAATTTTTACTATTAATAAAATT ACATTTTATGCATGCATTCTTTTGATCTCACGATTTTGCTCCTAGTTGAGATATATAAATAGGAATTGTCATTCACTGTC TATTTTCTACTTAGAACTTAGAAGCTTTATTTCTGTTATTATCTTGAATCTTTTCCAACATATACTTGTTTATGGGAGTT ATAGGATGCTGTTTCCCTTTAGTGGAGATTTCAGATTGCCACTGATGCTTAATTTGTTGGGGATGTGCATTATCCCTCTT CCCCTTGCTATAATTTTTGTCGTTTTCTCATAGTAACTATTATGCTGTTTCTTTCCATGAATATATATAAATGCTGATAT ACTTCTTTGCTGTCTTTTCGATTAAATTGTCATTTCTGTAAAAACATACCAGAGTCATACGATGCAGATGTTCTGGTGAG CATGAGCATGGGTGTACTTTAGTTGTCAATACATTCATATTTCTTTCTTGACTTTGAGCCACTGCAGTGAATGCATCTCA ACTGATAATGTTTCCTCATCTGTCACTGTTATGACTGATTACATCCTTATTTTTTCAGCCTATCTTTCAAAGATATCCAC GGCCTGAGAAGGAATACCAGTCATTTTCACTTATCTACAGTGATAGGTCACTGGATTTGGTATAAATTTCTCATTCTCCC TTTATGGAAAATGACCCATATGTGCTGCATAGGAAAAGTGTCATTTCAGTTCTTGGGTAACCAATATCTGATTGAAATGT ATCAACTCAATTTATCAATGAAATACCTAAGTTAATCTCTATAAGGAGTTGTGGCAACTGGCAAGAATGTGTGCTACATT CATGGTTAAAACTGTGAGTAAATTTAGTTTAAATTCATTCTTAATATTGTATAATCACAAACTTGAAATGGAAATATTTT CCGATGCTGCATTGATGGGTCATTTTCCCTCTTTAGGTGTATGCTTGGCCTGCTGCTTTGATTGGACAGTTATCATAGAC ATTATGAGCATTATTTAGGTATTTTGTTTGCATAAGCTTAATAAAGTCTTGTGATCTGTTTCTTCTCTACTAGATTTGCA AGGATAAAGATGAAGCTGAGGTTTGGTTCAGTGGGTTGAAAACATTGATTTCACGCAGTCATAACCGGAAGTGGAGAACA GAGTCAAGAAGTGACGGCATTCCATCTGGAGCTAATAGTCCTCGAACGTACACTAGAAGTTCTCCATTGAATTCTCCATT TGGTAGTAATGAAAGCTTTCAAAAGGTATTAATATATGTGTCCTTTCATGTTCTCCCTGTTTGACTAGACTTCAGTTGAA GATGTTCACTGAAATTTTTTGTTTTCTCTATTCAGGATAGTGGGGATCATCTTCCTCTTCATAGCCCATATGAAAGTCCT CCCAAGAATGGTTTGGATAAGGCATTTTCTGATGTGATTTATTATCCTCTTCCTCCAAAGGGTTTCTTCCCTCCAGATTC TGCCAGTGGTTCAGTCCACTCTGTGTCGTCAGTTGGATCTGATAGCATGCATGGTCACATGAAGACAATGCCTATGGATG CTTTTCGAGTTAGTTTATCAAGTGCTGTTAGTTCATCTAGCCAAGGTTCTGGTCATGATGATGGTGATGCCTTAGGGGAT GTTTTCATTTGGGGGGAAGGCACAGGTGATGGTGTTTTGGGTGGTGGAGCTCACCAAGTTGGAAGTTGCTTTGATGCTAA AATGGATTCTCTACTGCCCAAAGCCTTGGAATCGGCAGTAGTTCTTGATGTACAGAATATTGCTTGTGGTGGTAAACATG CAGCCTTAGTGTCCAAACAAGGTGAAATTTTCTCTTGGGGGGAAGAATCAGGAGGCAGGCTTGGGCATGGCGTTGACTCT GATGTTCCCCATCCAAAGCTTATTGAATCTCTAAGTAGTACAAATATTGAACTTGTAGCTTGTGGGGAGTATCATACATG TGCTGTGACACTTTCTGGTGATCTTTATACATGGGGTGATGGAACTTACAATTATGGTCTTCTGGGGCATGGAAATCAGG TGAGCCACTGGGCCCCAAAAAGAGTACATGGCCTCTTGGAGGGCATACATGTTTCTTCTATTTCTTGTGGTCCATGGCAC ACTGCTGTTGTAACCTCTGCGGGACAATTATTTACTTTTGGTGATGGTACATTTGGTGTTCTGGGTCATGGAGACCGAAA AAGTGTTTCCCTTCCAAGAGAAATAGAGTCCCTGAAGGGTCTTCGCACTGTGCAGGCTGCTTGTGGTGTTTGGCATACTG CTGCAGTTGTGGAAGTCATGGTTGGAAATTCAAGTTCCAGCAACTGCTCTTCAGGGAAGCTGTTTACTTGGGGTGATGGA GACAAAGGTCGGCTTGGGCATGGTGACAAGGAAGCCAAACTTGTTCCCACCTGTGTTGTAGCCCTACTTGAACCCAATTT TTGTCAGGTTGCTTGTGGTCATAGTATGACTGTTGCACTTTCTAGATCAGGCCATGTCTATACCATGGGCAGTTGTGTCT ATGGTCAGTTAGGAAATCCTAAAGCTGATGGGAAGCTACCAACTCGTGTTGAAGGAAAGCTTTCAAAAAGCTTTGTGGAG GAAATAGCTTGTGGTGCATATCATGTTGCGGTTTTAACTTCAAGGACTGAAGTTTACACTTGGGGTAAGGGTGCAAATGG TCGTTTAGGCCATGGAGATACTGATGATAAAAACTCCCCAACATTAGTAGAAGCATTGAAAGACAAACAAGTCAAAAGTA TTGCTTGTGGTACAAATTTCACCGCAGCCATATGCCTGCATAAGTGGGTATCTGGTGTTGACCAATCCATGTGTTCTGGT TGCCGTCTGCCATTTAATTTCAAAAGGAAACGCCACAATTGTTATAATTGTGGACTTGTTTTTTGCCATTCATGCAGCAG TAAGAAGTCTGTTAAGGCATCAATGGCACCAAACCCCAACAAACCGTATCGTGTCTGTGATAGTTGTTATAATAAGATAA AGAAAGCTACAGTGACTGATTCTTCGTCTCAGTCTTCAATGAGCAGAAGAGGAAGTATTAATCAGGGGTCACTTGAGTTT GTTGGTAAGGATGATAAATTGGATTCCAAATCAAATAATCAGATTGGCAGGTTCTCTTCAATGGAATCCTTGAATCAAGT GGACAGCAGATCTTCAAAGAAAAATAAGAAATTGGAATTCAACAGTAGCCGTGTCTCGCCTGTTCCAAATGGAGGTTCAC AATGGGGAGCAAGGAATATTTCCAAATCTTTTAATCCTGTTTTTGGATCATCAAAGAAGTTTTTTTCAGCTTCTGTTCCT GGATCTAGAATTGTTTCCCGGTCAACATCCCCAGTATCTAGACGGCCTAGTCCACCTCGTTCAACTACTCCAACCCCAAC GCTGGGAGGACTTACATCCCCGAAGATGGTCGTGGATGATGCCAAGATGACCAATGACAGCCTCAGTCAAGAGGTTGTTA AATTAAGATCACAGGTATTTTATTTTATGCCTACATTGATAGACGATGTACCCTTTCTGAGATTTTTTTTTTGAATAGTT TTAATGTGGCACCCCTTTCTGTATTTGAACTAGTTTTTCTTTTTTCCTTTTTGGAAATGGAATTATGGATTATAGCCAAA TGGCCCAACCAAGCCATCATGAGGAAAAAAAGGCCAAGCATGAAGTTTGACACTAGTTGTTTGCTATTAAGCTTGAATTG GTGCTAGTAAAATGCATATTTTAATTGAAAGTGACTTAATTACTTGCTGTATTGTCTGGTTATGGTTAGAGGTGAATAAC AGTCTCAAAATCCACAAGAATTTAAAATTTATGTATGTGTAGAGATTTAGTATTGCCATGCAGATTTTACTTTTTAATAT TGTCATGTCAGAGTATGTGTGGCATGTAAGATGTAACTACTTCAGGTAGGGCCATCATGATCAAAGCTGGCTCAGGAACT TAGAGTCTAAGACTCAGTTTGCTAACAGCTCAATAAGCTAGGCTCTTTAACTTAGTGAGCGGGCTTGATTTGAAAATTTC GACTTTAGTAAAATGAAAACCGAGCTTGAGCTTTTATAGATTTGACTTAGCTTGGCTCATTGCTAGTCCTTGTTTAAGGT GGTTAGATTCTGCTTATAAGCTTTTATTTCACGTAAAGGAAGGTGATTTTGTAACCAAGAGAACCAGAGGAGTTTTAGCT AGTAGCAACAATTGGGTTAAATTCGCTAGGAGTGCACTAAATGACATGGGTTTCACTCTGTATTTGGTGGGAGCTATGTG AGTTGCACCACATAATGGTGTATTAGAGAGTGACTTGCAAGTATGTCTCTTACAATCAAATGTGCTGTGCACACATTTGA TGATACCTACTTTTATTCCTTGGTTGGTTTTTGTTAAATTTGAGTTGATCCAGAAATTAACTGGGGACTTTTCCTTACCT TTTTTTACATGGTTCAGTTAATCTATTTGGAAGAGCTTCTTCTGATCACTTATGAAACATTTTTTCATAAACAACAGTTG GAAATATGATACCTATATTTTACTGTCATGGGAAAGAAAATGATTGCTTTCTCCTCCTTTCCCCTTATTTTTCTAAGCCA CTTTGCTCACTTGGTTATCTAGCCTGATGAGTTTTCTCCCACTTTAGGTGGAAAGCTTGAATCGGAAAGCCCAGCTTCAA GAAATTGAGTTGGAAAGAACAACTAAACAGCTAAAAGAAGCAATATCAATTGCCAACGAAGAGACTGCCAAATGCAAAGC AGCAAAGGAAGTGATCAAGTCGCTTACTGCCCAGGTAAAAATTCTAATTCCTTGAACCATGTTTAACAAACTAGATTCCT TGCGGCAAAAGGCCCTTACACACTCATGATGCAAATACGATGGACCGAAAAAAATTTATTTCCTTGCACTCAACTAGAAC AAATTTTGAGTACTATTGTAGTACACTGATTACTTAGAGCTCCCTCTAACAAATTGAATGATATCTCTTTTATCTTACTC TAAAAATAAAAGGAAAAACTACTAACCATATATTATATGGAGTTTAGCACATATGAAAGTTTTTCCCTGAACTGGGTTCA CACACGGAATAGTGGTTGGTTAACTTTTTCCTTTTCCTTTTAAAGAACCTAACTACTATCTCCTTGAAAAACCTTATTCA AGCAGATGCTACGCCTATGTAAGTTTTCATAAGTTGTTTGGTTCACCTTGTCGAACTCAACAAGTTCAGTAGAGAAGGTG GACTAATAGGTGAATGTTTTTTAGATGAGGATATATAAATGTGATTGTCACTTGTGAGACCAGCATGATTCCCTTGATGG TTGGTGTCTCTTTAAATAAATGTGTTTCTTTCTTCTTTGGTGTTAGAGTTGACACTTATACTAGAGTGCTCAAACTTGGG GACTTTTAGTCCAGAGTTAAATTAACCAGGACTAGCCTTCTGGAAAAATAAATATAGGCCTAAAATTTAGGAAAATCTTG TAAAATAAAGTTCATACGTTGATTTGATACAAGTGTCTGCCTAAATTTAATAATGCAATATAATTTCCTAAAATAACTCT AGGATATTAGCACTGATAGTGTAAGAATGAGCCATAACAGTTTGGCCCAGCATCAATACTAAACCAGAGGATTTCGATTT AAGCTTGTCTTATAGACTTGTACTAGGTGTATAAGAACTAGTCTCATTGATCATACACTTTGTTTCTTGATCTGTATAGT TGAAGGACATGGCCGAGAGGCTGCCTATAGGAGCAACCAGGAATGTTAGATCACCATCTCTTGCTTCCTTTGGTTCCGAC CTTGGTTCCAATGACGTTACCAATGCTACGATTGATCAATTGACTATTCAAACAAGAAGCCAAGAGTCAGACTTAACAGG ATCAAATGACCAGTTGCTTTCAAATGGATCAAGCACTATCACCAACCGTAGTGCAGGTCACGGTAAACACAGTCAATCAA ATGCAACTAGCAGAAATGGGTACAAAACAAAGGATAACGAGTCTCGAAATGAAACTGAATGGGTTGAGCAAGATGAACCT GGTGTATACATTACTCTCACCTCTCTACCAGGAGATGTAATAGATCTTAAGAGAGTTCGCTTCAGGTATGGAATGCTCTA TTGCATTGATGTTGTGTTTTTGTCAACTTTCATTATTTACTTTCCAAAATTTGGTATAGTATGATACAAATAGTGTCATT CCTTTAATTCAATATCTGATGGGGAAACAAAGACTTTACTAGCAAGTAGCAACTAAGATAATTATGTTATATTTCATACA TAGGCCATGTTATATAACCTGGGCTTTAACCTTTGCATTGGTGGATGCAGTCGAAAGCGGTTTAGTGAGAAACAAGCAGA ACAATGGTGGGCTGAGAATCGGGCAAGAGTATATGAACTGTACAACGTGCGCTTGATTGACAAGTCAAGTATTGGTGTTG GGAGTGAGGAACTGGCTCATTGA
CDS sequence (LotjaGi6g1v0181100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGCTGACTATACTGACTATGCTTCTTTTCATATCTGAACTACAGGCCATTACTGCATTGAAGAAAGGGGCTTACTT GCTCAAGTATGGAAGAAGGGGGAAGCCAAAGTTTTGCCCCTTCCGGCTTTCCAATGACGAATCTGTCTTGATATGGTTCT CAGGAAAAGAAGAGAAACGTCTTAAACTAACTAATGTTTCTAGAATTATATCTGGACAACGAACGCCTATCTTTCAAAGA TATCCACGGCCTGAGAAGGAATACCAGTCATTTTCACTTATCTACAGTGATAGGTCACTGGATTTGATTTGCAAGGATAA AGATGAAGCTGAGGTTTGGTTCAGTGGGTTGAAAACATTGATTTCACGCAGTCATAACCGGAAGTGGAGAACAGAGTCAA GAAGTGACGGCATTCCATCTGGAGCTAATAGTCCTCGAACGTACACTAGAAGTTCTCCATTGAATTCTCCATTTGGTAGT AATGAAAGCTTTCAAAAGGATAGTGGGGATCATCTTCCTCTTCATAGCCCATATGAAAGTCCTCCCAAGAATGGTTTGGA TAAGGCATTTTCTGATGTGATTTATTATCCTCTTCCTCCAAAGGGTTTCTTCCCTCCAGATTCTGCCAGTGGTTCAGTCC ACTCTGTGTCGTCAGTTGGATCTGATAGCATGCATGGTCACATGAAGACAATGCCTATGGATGCTTTTCGAGTTAGTTTA TCAAGTGCTGTTAGTTCATCTAGCCAAGGTTCTGGTCATGATGATGGTGATGCCTTAGGGGATGTTTTCATTTGGGGGGA AGGCACAGGTGATGGTGTTTTGGGTGGTGGAGCTCACCAAGTTGGAAGTTGCTTTGATGCTAAAATGGATTCTCTACTGC CCAAAGCCTTGGAATCGGCAGTAGTTCTTGATGTACAGAATATTGCTTGTGGTGGTAAACATGCAGCCTTAGTGTCCAAA CAAGGTGAAATTTTCTCTTGGGGGGAAGAATCAGGAGGCAGGCTTGGGCATGGCGTTGACTCTGATGTTCCCCATCCAAA GCTTATTGAATCTCTAAGTAGTACAAATATTGAACTTGTAGCTTGTGGGGAGTATCATACATGTGCTGTGACACTTTCTG GTGATCTTTATACATGGGGTGATGGAACTTACAATTATGGTCTTCTGGGGCATGGAAATCAGGTGAGCCACTGGGCCCCA AAAAGAGTACATGGCCTCTTGGAGGGCATACATGTTTCTTCTATTTCTTGTGGTCCATGGCACACTGCTGTTGTAACCTC TGCGGGACAATTATTTACTTTTGGTGATGGTACATTTGGTGTTCTGGGTCATGGAGACCGAAAAAGTGTTTCCCTTCCAA GAGAAATAGAGTCCCTGAAGGGTCTTCGCACTGTGCAGGCTGCTTGTGGTGTTTGGCATACTGCTGCAGTTGTGGAAGTC ATGGTTGGAAATTCAAGTTCCAGCAACTGCTCTTCAGGGAAGCTGTTTACTTGGGGTGATGGAGACAAAGGTCGGCTTGG GCATGGTGACAAGGAAGCCAAACTTGTTCCCACCTGTGTTGTAGCCCTACTTGAACCCAATTTTTGTCAGGTTGCTTGTG GTCATAGTATGACTGTTGCACTTTCTAGATCAGGCCATGTCTATACCATGGGCAGTTGTGTCTATGGTCAGTTAGGAAAT CCTAAAGCTGATGGGAAGCTACCAACTCGTGTTGAAGGAAAGCTTTCAAAAAGCTTTGTGGAGGAAATAGCTTGTGGTGC ATATCATGTTGCGGTTTTAACTTCAAGGACTGAAGTTTACACTTGGGGTAAGGGTGCAAATGGTCGTTTAGGCCATGGAG ATACTGATGATAAAAACTCCCCAACATTAGTAGAAGCATTGAAAGACAAACAAGTCAAAAGTATTGCTTGTGGTACAAAT TTCACCGCAGCCATATGCCTGCATAAGTGGGTATCTGGTGTTGACCAATCCATGTGTTCTGGTTGCCGTCTGCCATTTAA TTTCAAAAGGAAACGCCACAATTGTTATAATTGTGGACTTGTTTTTTGCCATTCATGCAGCAGTAAGAAGTCTGTTAAGG CATCAATGGCACCAAACCCCAACAAACCGTATCGTGTCTGTGATAGTTGTTATAATAAGATAAAGAAAGCTACAGTGACT GATTCTTCGTCTCAGTCTTCAATGAGCAGAAGAGGAAGTATTAATCAGGGGTCACTTGAGTTTGTTGGTAAGGATGATAA ATTGGATTCCAAATCAAATAATCAGATTGGCAGGTTCTCTTCAATGGAATCCTTGAATCAAGTGGACAGCAGATCTTCAA AGAAAAATAAGAAATTGGAATTCAACAGTAGCCGTGTCTCGCCTGTTCCAAATGGAGGTTCACAATGGGGAGCAAGGAAT ATTTCCAAATCTTTTAATCCTGTTTTTGGATCATCAAAGAAGTTTTTTTCAGCTTCTGTTCCTGGATCTAGAATTGTTTC CCGGTCAACATCCCCAGTATCTAGACGGCCTAGTCCACCTCGTTCAACTACTCCAACCCCAACGCTGGGAGGACTTACAT CCCCGAAGATGGTCGTGGATGATGCCAAGATGACCAATGACAGCCTCAGTCAAGAGGTTGTTAAATTAAGATCACAGGTG GAAAGCTTGAATCGGAAAGCCCAGCTTCAAGAAATTGAGTTGGAAAGAACAACTAAACAGCTAAAAGAAGCAATATCAAT TGCCAACGAAGAGACTGCCAAATGCAAAGCAGCAAAGGAAGTGATCAAGTCGCTTACTGCCCAGTTGAAGGACATGGCCG AGAGGCTGCCTATAGGAGCAACCAGGAATGTTAGATCACCATCTCTTGCTTCCTTTGGTTCCGACCTTGGTTCCAATGAC GTTACCAATGCTACGATTGATCAATTGACTATTCAAACAAGAAGCCAAGAGTCAGACTTAACAGGATCAAATGACCAGTT GCTTTCAAATGGATCAAGCACTATCACCAACCGTAGTGCAGGTCACGGTAAACACAGTCAATCAAATGCAACTAGCAGAA ATGGGTACAAAACAAAGGATAACGAGTCTCGAAATGAAACTGAATGGGTTGAGCAAGATGAACCTGGTGTATACATTACT CTCACCTCTCTACCAGGAGATGTAATAGATCTTAAGAGAGTTCGCTTCAGTCGAAAGCGGTTTAGTGAGAAACAAGCAGA ACAATGGTGGGCTGAGAATCGGGCAAGAGTATATGAACTGTACAACGTGCGCTTGATTGACAAGTCAAGTATTGGTGTTG GGAGTGAGGAACTGGCTCATTGA
Protein sequence (LotjaGi6g1v0181100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLTILTMLLFISELQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLKLTNVSRIISGQRTPIFQR YPRPEKEYQSFSLIYSDRSLDLICKDKDEAEVWFSGLKTLISRSHNRKWRTESRSDGIPSGANSPRTYTRSSPLNSPFGS NESFQKDSGDHLPLHSPYESPPKNGLDKAFSDVIYYPLPPKGFFPPDSASGSVHSVSSVGSDSMHGHMKTMPMDAFRVSL SSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGAHQVGSCFDAKMDSLLPKALESAVVLDVQNIACGGKHAALVSK QGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAP KRVHGLLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEV MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLGN PKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTN FTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSVKASMAPNPNKPYRVCDSCYNKIKKATVT DSSSQSSMSRRGSINQGSLEFVGKDDKLDSKSNNQIGRFSSMESLNQVDSRSSKKNKKLEFNSSRVSPVPNGGSQWGARN ISKSFNPVFGSSKKFFSASVPGSRIVSRSTSPVSRRPSPPRSTTPTPTLGGLTSPKMVVDDAKMTNDSLSQEVVKLRSQV ESLNRKAQLQEIELERTTKQLKEAISIANEETAKCKAAKEVIKSLTAQLKDMAERLPIGATRNVRSPSLASFGSDLGSND VTNATIDQLTIQTRSQESDLTGSNDQLLSNGSSTITNRSAGHGKHSQSNATSRNGYKTKDNESRNETEWVEQDEPGVYIT LTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRLIDKSSIGVGSEELAH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 17 | 17 | - | – | |
| SignalP_EUK | 1 | 17 | 17 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 2 | 12 | 11 | - | – | |
| Gene3D | 11 | 131 | 121 | 7.8E-22 | ||
| Phobius | 13 | 17 | 5 | - | – | |
| CDD | 15 | 122 | 108 | 7.41606E-51 | – | |
| SUPERFAMILY | 15 | 121 | 107 | 2.34E-27 | – | |
| Pfam | 16 | 121 | 106 | 1.6E-6 | ||
| PANTHER | 16 | 1087 | 1072 | 0.0 | – | |
| PANTHER | 16 | 1087 | 1072 | 0.0 | – | |
| Phobius | 18 | 1100 | 1083 | - | – | |
| MobiDBLite | 126 | 183 | 58 | - | – | |
| MobiDBLite | 136 | 167 | 32 | - | – | |
| Gene3D | 210 | 383 | 174 | 3.6E-29 | ||
| SUPERFAMILY | 259 | 650 | 392 | 5.14E-98 | ||
| ProSiteProfiles | 260 | 321 | 62 | 11.63 | ||
| PRINTS | 305 | 318 | 14 | 3.1E-16 | ||
| ProSitePatterns | 308 | 318 | 11 | - | ||
| ProSiteProfiles | 322 | 373 | 52 | 15.107 | ||
| Pfam | 322 | 370 | 49 | 5.4E-12 | ||
| PRINTS | 324 | 340 | 17 | 3.1E-16 | ||
| Pfam | 373 | 425 | 53 | 4.6E-9 | ||
| ProSiteProfiles | 374 | 428 | 55 | 14.544 | ||
| PRINTS | 374 | 390 | 17 | 3.1E-16 | ||
| Gene3D | 384 | 648 | 265 | 1.2E-77 | ||
| PRINTS | 415 | 431 | 17 | 3.1E-16 | ||
| ProSitePatterns | 415 | 425 | 11 | - | ||
| ProSiteProfiles | 429 | 480 | 52 | 12.836 | ||
| Pfam | 429 | 477 | 49 | 1.2E-12 | ||
| PRINTS | 431 | 445 | 15 | 3.1E-16 | ||
| ProSitePatterns | 467 | 477 | 11 | - | ||
| Pfam | 492 | 541 | 50 | 1.2E-12 | ||
| ProSiteProfiles | 493 | 544 | 52 | 15.429 | ||
| PRINTS | 534 | 552 | 19 | 3.1E-16 | ||
| Pfam | 544 | 593 | 50 | 1.3E-7 | ||
| ProSiteProfiles | 545 | 596 | 52 | 13.338 | ||
| PRINTS | 592 | 613 | 22 | 3.1E-16 | ||
| ProSiteProfiles | 597 | 648 | 52 | 14.705 | ||
| Pfam | 598 | 645 | 48 | 3.6E-14 | ||
| SMART | 647 | 716 | 70 | 1.6E-18 | ||
| Pfam | 649 | 715 | 67 | 4.8E-13 | ||
| Gene3D | 649 | 719 | 71 | 1.9E-16 | ||
| SUPERFAMILY | 649 | 716 | 68 | 1.77E-17 | ||
| ProSiteProfiles | 653 | 715 | 63 | 11.648 | ||
| CDD | 658 | 711 | 54 | 3.12812E-17 | – | |
| MobiDBLite | 744 | 798 | 55 | - | – | |
| MobiDBLite | 753 | 769 | 17 | - | – | |
| MobiDBLite | 782 | 798 | 17 | - | – | |
| MobiDBLite | 825 | 855 | 31 | - | – | |
| Coils | 859 | 935 | 77 | - | – | |
| Pfam | 910 | 940 | 31 | 2.2E-16 | ||
| Pfam | 951 | 1020 | 70 | 2.2E-21 | – | |
| MobiDBLite | 974 | 1031 | 58 | - | – | |
| MobiDBLite | 974 | 1016 | 43 | - | – | |
| MobiDBLite | 1017 | 1031 | 15 | - | – | |
| Pfam | 1026 | 1081 | 56 | 1.3E-27 | ||
| ProSiteProfiles | 1027 | 1082 | 56 | 33.941 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi6g1v0181100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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