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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0005200 |
| Transcript ID | LotjaGi6g1v0005200.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Regulator of chromosome condensation (RCC1) family protein; TAIR: AT4G14368.2 Regulator of chromosome condensation (RCC1) family protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|G7I4N4|G7I4N4_MEDTR Chromosome condensation regulator RCC1 repeat protein; Found in the gene: LotjaGi6g1v0005200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:1030511..1037347) extracted from Lotus japonicus Gifu genome v1.2.
GTGTGTTGATAATGAAGCCAATGGTTAATCTCACGGTTACGAGAGGATAACTTGGTATCACCAAATAAATAATGTTATTG TTTAAATAAGCGAGACTGCGACTGCGACTGCGAGAGTATGTATGTTAAAAATAAAATTTTATTAATTTTGAAATTTATTA AATGTATGTAACGGGGTGATGTATAATCAGTTGGTGAATGGGGAAGCAATTTAAGCGCGCCAATATCTCATTCCCTTTCC TTTTACGTAACTTTCGCATCTTCTCTCTCTCTCACAATTGCTGAGACCAATTTTTCCCAGAAATTGATCAACCACTTTTT GATGCAAATTTCACACCCCCTTTTTCCAAGTTTCAATCTTTTTGGCAGTGGCATTCAAATCTTCTTCTGGGTCATTCATT CTCATTATCTTTCTTTCTGGGTTTGAGACATTTTTTCTTCATTTTTAAGAAGAAAAAAAACTTGTCTGGATTATATTTTT CTTGAGAAACTTTTCATCTTTGAGGTTTTAGGAGACTTTGATGAGAGACTCAAGCAGAAAGCATGACGCTTGAGTTTTGT GGTCTCCAGTGGTTTCCTAACAATTACTTTCAGATGGAATGGCAGATCCTGCTAATATTGAACAAGTTAGTTTCACAATC AGATTACTCTTTTTCTCTTAAATTAATTGTTTGGTAGCTGGAAAATATTAGAATTTTTGACTTAATTCATGCAAAGAAAA TCATTTTGTTACCATCAAGACCATCATGTTCATGCTTACAATGTTGCAATAGGAATTTGTTACTGATATGATATTCTAAA GATTATGTTACTTAGGCTTTCCACTCACTCTAATTAAATTTCTGTTTTACATTTTCTGAAGGCATTCTTTGCTTTGAAAA AGGGCACTCAGTTTATTAAGTATAGTCGAAAAGGGAAGCCAAAATTTTGTACATTCAGGCTCTCAAGGGTGAGTTTTTTT TTCCAGTGAAATATTTATGTCCAAACCAAAATGCATATGCATATTATATATGTGGAATTTCATTTCTTTGTATGAATGAT TTCATATTTAGTGGTATTAGCAGGATGAAACAACACTGATTTGGATTTCTCATGGTAAGGAAAAGAATTTGAAGTTGTCT TCCGTTTTACGCATCGTCTCAGGACAGAGAACAGTAAGTTAAATGCTTGGTCTTTGGACGCTATATTTATGAGATGGTTA TTGGTTATGTTAATTAGAACTCAGGTTTCCTTTTAACTTACACTTTGCAGGCTGTCTTTAAAAGATATTTGCGCCCTGAA AAGGATTATCTGTCATTTTCACTTATTTATAAGAACGGGGAACGATCACTTGATCTGGTTAGAAAAGAAACCTTGACTCT CATATTGAACCTAAACTTTTAAATTTCATACAAATTTTGAAATTATTGCTTCCCTTGTCATTTTTCTAGATCTGCAAGGA CAAAGATGAGGTAGAGGTATGGCTTACAGGCCTTAAGGCATTAATTTCTACTGGAGAGCGTAGCAGGCAACACACTAGAA GCGATTTAACGGATGTGAGTGCTAGCATTGCTTTGTATCTAGGTTTTGAGTTGTTCTAATCCTGCTACAAATTGTACACC TATTCGTTTCTAAATCTATTGAGCCCTTATGCTATTTCACCAAGTCGTAAGTGTGATTCTCATGCAAGGAATTTATCTCA TCCCACATGGCTTCCATCCATTCTTCATTGTACTCAATCCTTCATAGGTTTATCTAAATATTTCAGTTCTCCATTGTTAA TCACCAAAACATACTCATAAAGTAGTGTGCCTTTAAGAACATTGTATTTTCTCTAGCGGATTTTCTCCATGTAACAAATT TATTGTATTTAAAACTCTTATTCAATAAATTTATTAAAAAAATGTAGCTGTAGTATGTGAAAAAACCAAATTCTTATTCA TAATAAGATTAGATCTATATATACAAGTCAAATTATCTCAGTGCTCAAGATGAGATTAGGTTAAAGTGGTCATTGTAGCT CTGGTTCCATGACAAGGAAGAATTGTGCTTTAGCATAAAGTGGTCAATGTAGCTCTGGTTCTATGACAAGGAAGAATTGT CCTTTAGCATAGAGTGGTTTGGCAAAAACACATGAAAAGGGTTCTTTTTTCTAACATTTATATTGAGAATTTTCGAATGA AGTAAATTTTTTTTTCATTACAGGATAGTGTTGACTTTGCTCTGAATGATCATCCTTTTGGTGGTGGAACACTAGATTTT ACTTCAAGCAATCCCCAGGAGAGGTCTTCTTTGGATTCAGGCTCTCGAGAATCTTCAGTGTATTTTGCAAGATCAGATGT GGGGTCAGAATATGCAAATATGCCAATAAGGACAAGTGTTGGAGATGGTTCCCGCGTCAGTGTGTCGAGCATTGGCCACG CAAGTATAGCATCAGGACCAGATGACATAGAATCTCTAGGTGACGTTTTTATATGGGGAGAGGTTTGGGCAGATGGCACT TCATCTGATGGGTCAGGGAGTCAAGTCCCTTCTAAGATAGATGTGCTGACTCCTAAGCCATTAGAGTCTAATGTTGTTCT TGATGTTCATCAGATTGGGCCTGGTGTAAGGCACATTGCTCTAGTTACTAGACAAGGAGAGGTTTTCACCTGGGGAGAAG ACTCTGGGGGAACACTTGGTCATGGGCTTGATAAAGATTTTGGTCAACCTCATCTTGTGGAGTCCCTTGCAGTTACTAAT GTTGGTTTTGTTTCATGTGGCGAGTATCATACATGTGCTGTTTCTTCATCTGGTGATTTATTCACCTGGGGTGATGGCAC ACATAATGCTGGACTTCTCGGCCATGGCACCGATGCTAGCCACTGGATACCGAAGAGGGTCGCTGGCCCTTTAGAGCGAC TTCAGGTTGTATCTATATCATGTGGCACATGGCATTCAGCATTTGCAACATTGAATGGTAAGCTTTATACCTTTGGTGAT GGAATATTTGGTGTCTTGGGCCATGGAGATCGAGAGAGCGTGTCGTACCCAAAGGAGGTACAGCTATTGAGTGGACAGAG GGCTATGAAGGTGGCGTGTGGAGTGTGGCACACAGCTGCAATTATAGAGGTTACGGATCAATCAGGTTCTTCATCCAGGA AGCTCTTTACTTGGGGTGATGGTGACCAATATCGTTTGGGTCATGTTAACAAAGAAATCTACCTTCAACCAACTTGTGTA GCTGCACTTTCTGAGTATAGTTTTCAGCAGATTGCATGTGGACACACTATGACTGTGGCACTGACTGCATCTGGTCATGT TTTTACTATGGGAGGCACAATGTATGGTCAACTAGGGAACCCAATGTCTGATGGAAAAGTGCCGAATCTAGTCCGAGATA AGTTAGTAGGCGAGTTTGTTGAGGAAATATCTTGCGGAACACATCATGTTGCGGTATTGACTTCAAGAAGCGAACTATAT ACTTGGGGGAGAGGTGCTAATGGAAGATTGGGACATGGAGACACAGAAGATCAGAAAACTCCAACTTTGGTTGAAGCTTT GAAAGAGAGACATGTAAAGAATATCTCATGTGGATCAAGTTTTACTACTTGTATATGCATCCACAAATGGGTTTCTGGAG CTGACCAATCTGTTTGCTCTGACTGTCGACAACCGTTTGGTTTTACTAGAAAAAGGCATAACTGCTATAATTGTGGGTTG GTGTATTGCCATCCTTGTAGTTCAAAAAAGGCGTTGAAAGCAGCATTGGCTCCAACACCTAGCAAACCGCATCGCGTGTG TGATTCTTGTTATGTTAAGCTTAAAGGTTCTGAGAGTGGTAATGCTTCCAATTTTAATAGAGAAATTACTCGTCCTTCCA GTTCCGCATATGGAAGGGAAAAATTTGAGCGGGGAGAGGTAAGGCCTTCGAGAATTCTCTTGTCTCCTGTCACGGGGACA GCAAAATTCCTTGAGATAAGGAGCAGTAAGCATGGAAGTGCACATGACTCTCCTTCCATATTCCGAGCTGCTCAAGTTCC TTTCCGTTTACATTTGAAAGATGTTGTATTTCCAGGTTCGTCGAATTCCATGCAAAATGCTTCCAAGTCTTCTACACAGC CAAGTCAACATCCAATTCCACCTGCACCAGCTTTAAGACCAACATCACCATACTCAAAAAGACCACCGAGCCCGCCTCGT TCTATTTCCCCTGGATTTTCAAGAAGCCTCATTGACAATTTAAAGAAGAAAAATGACAATTTGAATCAAGAAGTGTCCAA GTTGCAAAACCAAGTATATTTTTCATTGTTTATTTTATACAACATTATTCTCTGTGGAACTTAGTATGACCCCCACTAAT AAGTTTAATGAGTATTTATTTTCTCACATATAGATTAATCGCTTGAAGAAAAAGAGTGACATGCAAGATATGAAGATTCA AGAGCTTCAGAAAAATATTGAGGAAGCCACCTCATTTGCTGGAGAGGAATCTTATAAGCATAGCGAAGCCAAGTCATTTA TTAAGTCCATCGCAGATCAGGTATCTTGTTTCTATATTTTGACATAACAATTGATCTTTTACCTGATAAGGTTTAAACAG AAACTTCATTGAATTCTGTATAATGAGAACACAAACACACATTTCATAGAAACTTTAAAAAAAGCATAATGCACACAAAA ACTGGCAGAAATCCTCCCAAAGATTCACCACATATAGTTAAATACCTGCTACATAACTGTTTACCATATAATTGCATTGT TACACAATTAAGTCACTACTAAATTTATGTCCTATCATATAACTGTCTCATTATAATTTTGAGCCTGATGGGAAAGAAAG AGGTTGTTGATCAGGCTTTCAGGTAGGCCATTTAAAATATCTAAACTCGCTTGTACATTTGATTTTGTTTAGTTGAGAGA AGTGGCCGCGAAGTTTCCACCTGAGATTCCTGAGAGTGAAACCTTGAAAGCTGTGCATGCTCAAGCTGAAGATTTCCTTA GGGGAAAATTAGAATTGGAATCTTGCGCGTCTAGCTTTGAGTCTGAGCCACAAAATGCAGCTGATATACCTGCCTCGGAT AGCAAGCCTTTGAGCCTGCAAGAGCAAAGAGTGGAGGAAAATGATGAAGCTTCTTCTGGGGTAGTGCCATCTATGGATGG AGGAAATGTTCTTCAAGAAAGTAACAGCTTTGGATCTGCCAATGGAGTGAGTCCACCGAGTGCGGATATTAGTTCGAGAT CAGCCGACTCTTATAATACGCCTGCGAATGAAGGAGAAAGAGAAACAACAGTCATTGAACAATTTGAACGTGGTGTTTAT CTCACACTCATAGTACTACCTGGTGGTATCAAAATCTTCAAGCGAGTTAGATTCAGGTATGGGAGCTAGTTGCTAATCTG ACAAATTTTCACTTATATATTCTTCCTGTACATGTTGAGTATCTCTGAACCATTGTTTTTTACTAGTTACAACATCTTTT TCTGTCATCAAATTACTGACTCTCATCGAATGTATGTAAAAACATATGCATGTGTTTCTATGACTAAAATTGTAACTACA TTGTTGAAATCATCATGGTGTGCAGTACAGGTGTTATTATTTGACTAAATTTGGTTCTTGCTAATTTCCCCCATGTAGTT TGATGACAATATGTTAACACCTTGTAAGTTGTATATTATAATCCACTGGTTTATACCATTACGTCGGGGGAGTTTGTTTC AAGCTATAGAATCATATTCCCAGGAATGTATTCTTGGGTAAAATGAAAAATGTTTGGCTTGTATTTATTATTCCCATGAA TGTTCCTCTAGAAATTCGACAGTTCCTGGCTCTCCTAACTAATTTCCTAACTTCCCTCCCTTTCTCAAACTCTCATATAG GACTGGGTAACTACCCAGTCAGGTACAACTGACAACTGTCCTAACTGACTCACAACTAAGGGTTATAATCCCCTGCATGC CTTCTTGTTTTCCTCTGGTAGACCCTCACGATAGGACCTACTCCTATCGAAGTTTTAGTGTAAAATAATTTTCATTCCCT TTGGAATGTAAGATTCTCTCTCTGTGATATGGGAATGAAATTTATGGAAAACATAGGTAAGTTATATTTCTGGGAATCCA TCATACCCAGGAATAAATTTTTTGAAGCTTGTACAAAAACCTAGAAATGTTACATTCCTAACCTCACTTCCCCATGAATG TTTTGAGATCCCTTGAAACGAACGCCCCCTTTGAGTATTGGTTTTCTTATTTCAGTTCTTGCTATTTTCTTTTTTTCTCC TTTAATTGTTTTTGACTTTCCCTTTTTGAGTGCAGTAGGCGAAGATTCAGTGAGCAACAGGCAGAAGAATGGTGGATCCA TAACAAAGATAGGGTGCTTAGTAAATACAATCCAGCAGCTATAATGAATGCAATTACAGGGTCACCTATCAGCCCACCTC AAGATGAAGAGAATGTTGAGGCATTAGCTTCTTCCTAAGATTGTCTCTTTGGTCTACAAAGGAATCACCATAGTGTGATG AAATTATCCACAATGGAGGAAGCATCAATCCACCAACTGTAAAGAAATCTATACTAGGAAAATTAGTGCAAAATCTTGGT AGGGTAGGATATGTATTAGGAACAACATGAGGTTTAGAGGTAGCATAAATTTCTTCTCAATTTAACATTCTTTGGATCTC ACTCTTTTCTTGTAAACCTTCCAATATAAAAGCCCCTTAAGATTGTATTCTGTCTTCAGATGACACAACTTTCTTTCCTG GTATTGTACATCAGTGTATGTATAATGTAACTCCTCTAACAACTAATAAGTCTAGAGAAGCAGGTAATATATGATGACAG AATGAGGACTAATGTTACATGCAAACTTAAAAAAAAG
CDS sequence (LotjaGi6g1v0005200.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGATCCTGCTAATATTGAACAAGCATTCTTTGCTTTGAAAAAGGGCACTCAGTTTATTAAGTATAGTCGAAAAGG GAAGCCAAAATTTTGTACATTCAGGCTCTCAAGGGATGAAACAACACTGATTTGGATTTCTCATGGTAAGGAAAAGAATT TGAAGTTGTCTTCCGTTTTACGCATCGTCTCAGGACAGAGAACAGCTGTCTTTAAAAGATATTTGCGCCCTGAAAAGGAT TATCTGTCATTTTCACTTATTTATAAGAACGGGGAACGATCACTTGATCTGATCTGCAAGGACAAAGATGAGGTAGAGGT ATGGCTTACAGGCCTTAAGGCATTAATTTCTACTGGAGAGCGTAGCAGGCAACACACTAGAAGCGATTTAACGGATGATA GTGTTGACTTTGCTCTGAATGATCATCCTTTTGGTGGTGGAACACTAGATTTTACTTCAAGCAATCCCCAGGAGAGGTCT TCTTTGGATTCAGGCTCTCGAGAATCTTCAGTGTATTTTGCAAGATCAGATGTGGGGTCAGAATATGCAAATATGCCAAT AAGGACAAGTGTTGGAGATGGTTCCCGCGTCAGTGTGTCGAGCATTGGCCACGCAAGTATAGCATCAGGACCAGATGACA TAGAATCTCTAGGTGACGTTTTTATATGGGGAGAGGTTTGGGCAGATGGCACTTCATCTGATGGGTCAGGGAGTCAAGTC CCTTCTAAGATAGATGTGCTGACTCCTAAGCCATTAGAGTCTAATGTTGTTCTTGATGTTCATCAGATTGGGCCTGGTGT AAGGCACATTGCTCTAGTTACTAGACAAGGAGAGGTTTTCACCTGGGGAGAAGACTCTGGGGGAACACTTGGTCATGGGC TTGATAAAGATTTTGGTCAACCTCATCTTGTGGAGTCCCTTGCAGTTACTAATGTTGGTTTTGTTTCATGTGGCGAGTAT CATACATGTGCTGTTTCTTCATCTGGTGATTTATTCACCTGGGGTGATGGCACACATAATGCTGGACTTCTCGGCCATGG CACCGATGCTAGCCACTGGATACCGAAGAGGGTCGCTGGCCCTTTAGAGCGACTTCAGGTTGTATCTATATCATGTGGCA CATGGCATTCAGCATTTGCAACATTGAATGGTAAGCTTTATACCTTTGGTGATGGAATATTTGGTGTCTTGGGCCATGGA GATCGAGAGAGCGTGTCGTACCCAAAGGAGGTACAGCTATTGAGTGGACAGAGGGCTATGAAGGTGGCGTGTGGAGTGTG GCACACAGCTGCAATTATAGAGGTTACGGATCAATCAGGTTCTTCATCCAGGAAGCTCTTTACTTGGGGTGATGGTGACC AATATCGTTTGGGTCATGTTAACAAAGAAATCTACCTTCAACCAACTTGTGTAGCTGCACTTTCTGAGTATAGTTTTCAG CAGATTGCATGTGGACACACTATGACTGTGGCACTGACTGCATCTGGTCATGTTTTTACTATGGGAGGCACAATGTATGG TCAACTAGGGAACCCAATGTCTGATGGAAAAGTGCCGAATCTAGTCCGAGATAAGTTAGTAGGCGAGTTTGTTGAGGAAA TATCTTGCGGAACACATCATGTTGCGGTATTGACTTCAAGAAGCGAACTATATACTTGGGGGAGAGGTGCTAATGGAAGA TTGGGACATGGAGACACAGAAGATCAGAAAACTCCAACTTTGGTTGAAGCTTTGAAAGAGAGACATGTAAAGAATATCTC ATGTGGATCAAGTTTTACTACTTGTATATGCATCCACAAATGGGTTTCTGGAGCTGACCAATCTGTTTGCTCTGACTGTC GACAACCGTTTGGTTTTACTAGAAAAAGGCATAACTGCTATAATTGTGGGTTGGTGTATTGCCATCCTTGTAGTTCAAAA AAGGCGTTGAAAGCAGCATTGGCTCCAACACCTAGCAAACCGCATCGCGTGTGTGATTCTTGTTATGTTAAGCTTAAAGG TTCTGAGAGTGGTAATGCTTCCAATTTTAATAGAGAAATTACTCGTCCTTCCAGTTCCGCATATGGAAGGGAAAAATTTG AGCGGGGAGAGGTAAGGCCTTCGAGAATTCTCTTGTCTCCTGTCACGGGGACAGCAAAATTCCTTGAGATAAGGAGCAGT AAGCATGGAAGTGCACATGACTCTCCTTCCATATTCCGAGCTGCTCAAGTTCCTTTCCGTTTACATTTGAAAGATGTTGT ATTTCCAGGTTCGTCGAATTCCATGCAAAATGCTTCCAAGTCTTCTACACAGCCAAGTCAACATCCAATTCCACCTGCAC CAGCTTTAAGACCAACATCACCATACTCAAAAAGACCACCGAGCCCGCCTCGTTCTATTTCCCCTGGATTTTCAAGAAGC CTCATTGACAATTTAAAGAAGAAAAATGACAATTTGAATCAAGAAGTGTCCAAGTTGCAAAACCAAATTAATCGCTTGAA GAAAAAGAGTGACATGCAAGATATGAAGATTCAAGAGCTTCAGAAAAATATTGAGGAAGCCACCTCATTTGCTGGAGAGG AATCTTATAAGCATAGCGAAGCCAAGTCATTTATTAAGTCCATCGCAGATCAGTTGAGAGAAGTGGCCGCGAAGTTTCCA CCTGAGATTCCTGAGAGTGAAACCTTGAAAGCTGTGCATGCTCAAGCTGAAGATTTCCTTAGGGGAAAATTAGAATTGGA ATCTTGCGCGTCTAGCTTTGAGTCTGAGCCACAAAATGCAGCTGATATACCTGCCTCGGATAGCAAGCCTTTGAGCCTGC AAGAGCAAAGAGTGGAGGAAAATGATGAAGCTTCTTCTGGGGTAGTGCCATCTATGGATGGAGGAAATGTTCTTCAAGAA AGTAACAGCTTTGGATCTGCCAATGGAGTGAGTCCACCGAGTGCGGATATTAGTTCGAGATCAGCCGACTCTTATAATAC GCCTGCGAATGAAGGAGAAAGAGAAACAACAGTCATTGAACAATTTGAACGTGGTGTTTATCTCACACTCATAGTACTAC CTGGTGGTATCAAAATCTTCAAGCGAGTTAGATTCAGTAGGCGAAGATTCAGTGAGCAACAGGCAGAAGAATGGTGGATC CATAACAAAGATAGGGTGCTTAGTAAATACAATCCAGCAGCTATAATGAATGCAATTACAGGGTCACCTATCAGCCCACC TCAAGATGAAGAGAATGTTGAGGCATTAGCTTCTTCCTAA
Protein sequence (LotjaGi6g1v0005200.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADPANIEQAFFALKKGTQFIKYSRKGKPKFCTFRLSRDETTLIWISHGKEKNLKLSSVLRIVSGQRTAVFKRYLRPEKD YLSFSLIYKNGERSLDLICKDKDEVEVWLTGLKALISTGERSRQHTRSDLTDDSVDFALNDHPFGGGTLDFTSSNPQERS SLDSGSRESSVYFARSDVGSEYANMPIRTSVGDGSRVSVSSIGHASIASGPDDIESLGDVFIWGEVWADGTSSDGSGSQV PSKIDVLTPKPLESNVVLDVHQIGPGVRHIALVTRQGEVFTWGEDSGGTLGHGLDKDFGQPHLVESLAVTNVGFVSCGEY HTCAVSSSGDLFTWGDGTHNAGLLGHGTDASHWIPKRVAGPLERLQVVSISCGTWHSAFATLNGKLYTFGDGIFGVLGHG DRESVSYPKEVQLLSGQRAMKVACGVWHTAAIIEVTDQSGSSSRKLFTWGDGDQYRLGHVNKEIYLQPTCVAALSEYSFQ QIACGHTMTVALTASGHVFTMGGTMYGQLGNPMSDGKVPNLVRDKLVGEFVEEISCGTHHVAVLTSRSELYTWGRGANGR LGHGDTEDQKTPTLVEALKERHVKNISCGSSFTTCICIHKWVSGADQSVCSDCRQPFGFTRKRHNCYNCGLVYCHPCSSK KALKAALAPTPSKPHRVCDSCYVKLKGSESGNASNFNREITRPSSSAYGREKFERGEVRPSRILLSPVTGTAKFLEIRSS KHGSAHDSPSIFRAAQVPFRLHLKDVVFPGSSNSMQNASKSSTQPSQHPIPPAPALRPTSPYSKRPPSPPRSISPGFSRS LIDNLKKKNDNLNQEVSKLQNQINRLKKKSDMQDMKIQELQKNIEEATSFAGEESYKHSEAKSFIKSIADQLREVAAKFP PEIPESETLKAVHAQAEDFLRGKLELESCASSFESEPQNAADIPASDSKPLSLQEQRVEENDEASSGVVPSMDGGNVLQE SNSFGSANGVSPPSADISSRSADSYNTPANEGERETTVIEQFERGVYLTLIVLPGGIKIFKRVRFSRRRFSEQQAEEWWI HNKDRVLSKYNPAAIMNAITGSPISPPQDEENVEALASS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 1003 | 1003 | - | – | |
| CDD | 5 | 117 | 113 | 7.06356E-45 | – | |
| Gene3D | 6 | 127 | 122 | 3.5E-23 | ||
| PANTHER | 6 | 1048 | 1043 | 0.0 | – | |
| PANTHER | 6 | 1048 | 1043 | 0.0 | – | |
| SUPERFAMILY | 7 | 116 | 110 | 2.33E-25 | – | |
| Pfam | 8 | 116 | 109 | 1.7E-9 | ||
| ProSiteProfiles | 84 | 117 | 34 | 6.877 | ||
| MobiDBLite | 147 | 168 | 22 | - | – | |
| Gene3D | 164 | 437 | 274 | 1.2E-50 | ||
| SUPERFAMILY | 218 | 601 | 384 | 1.31E-89 | ||
| ProSiteProfiles | 277 | 328 | 52 | 14.363 | ||
| Pfam | 277 | 325 | 49 | 7.6E-8 | ||
| PRINTS | 279 | 295 | 17 | 1.6E-13 | ||
| Pfam | 328 | 379 | 52 | 2.3E-10 | ||
| PRINTS | 329 | 345 | 17 | 1.6E-13 | ||
| ProSiteProfiles | 329 | 383 | 55 | 13.981 | ||
| PRINTS | 370 | 386 | 17 | 1.6E-13 | ||
| Pfam | 383 | 432 | 50 | 8.9E-14 | ||
| ProSiteProfiles | 384 | 435 | 52 | 13.037 | ||
| PRINTS | 386 | 400 | 15 | 1.6E-13 | ||
| ProSitePatterns | 422 | 432 | 11 | - | ||
| Gene3D | 438 | 604 | 167 | 4.5E-43 | ||
| ProSiteProfiles | 444 | 495 | 52 | 13.017 | ||
| Pfam | 446 | 492 | 47 | 1.1E-9 | ||
| PRINTS | 485 | 503 | 19 | 1.6E-13 | ||
| Pfam | 495 | 544 | 50 | 5.7E-5 | ||
| ProSiteProfiles | 496 | 547 | 52 | 11.871 | ||
| PRINTS | 543 | 564 | 22 | 1.6E-13 | ||
| ProSiteProfiles | 548 | 599 | 52 | 13.981 | ||
| Pfam | 549 | 596 | 48 | 1.8E-13 | ||
| SMART | 598 | 667 | 70 | 3.7E-21 | ||
| SUPERFAMILY | 600 | 669 | 70 | 3.79E-18 | ||
| Pfam | 600 | 665 | 66 | 4.2E-13 | ||
| ProSiteProfiles | 604 | 666 | 63 | 11.54 | ||
| Gene3D | 605 | 678 | 74 | 7.4E-17 | ||
| CDD | 610 | 662 | 53 | 8.46037E-17 | – | |
| MobiDBLite | 750 | 766 | 17 | - | – | |
| MobiDBLite | 750 | 798 | 49 | - | – | |
| MobiDBLite | 767 | 793 | 27 | - | – | |
| Coils | 802 | 843 | 42 | - | – | |
| Pfam | 853 | 887 | 35 | 3.4E-7 | ||
| MobiDBLite | 911 | 993 | 83 | - | – | |
| MobiDBLite | 955 | 993 | 39 | - | – | |
| ProSiteProfiles | 996 | 1051 | 56 | 29.536 | ||
| Pfam | 997 | 1050 | 54 | 9.6E-25 | ||
| Phobius | 1004 | 1020 | 17 | - | – | |
| Phobius | 1021 | 1079 | 59 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi6g1v0005200.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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