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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0049200 |
| Transcript ID | LotjaGi1g1v0049200.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|I1M739|I1M739_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0049200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:6825463..6835374) extracted from Lotus japonicus Gifu genome v1.2.
ATCACACTTCTCAGCCATAGACGACGACACTGTATTTCACTATTTCCTTTTCTTCTTTATTTTTTTTTATGCTTTTTTGT TTTTTTATAATTCTACTCTGCTTTCTCTCTCTAAAACCTCACTCTCTCTTTCTCTCTCTTCTGCAACTGATTTTCCTCCA GATCATACTCCTCTAGATTCTCCCATTCCGTTTTCCCGCACTTTCTCGCCGCGATTTTCTTCTCCGCCGCACTCACCTCA CCTCACTCACACCTCGATCACCGGAATCCGTCAACTATTCCCTTTCCCCTTCCTCGATCGCTTCCTTCCTCCGCAACCTG CCGGAGTTCCCGCCGGAGCTGTTGCCGTGCTGCATGAAGCTCCGGAGCTCTAATTATGGTGGATTTCAGCGCCGGTGAAG GCTCTGAACTGTTGCAGCGTGCCAATTTTGGTGTGAATTGATGAATGGAAGGGTTCGGGTATGGAAAATGGTTGAATGCT TGATTGAGTGTTTCGATTTTGAGATGAAATGGTTTCTGATTACTGTTTGTTTGTTTTTTCTTTGTTTCTATTTCTGGTGA TGATAGAATGACTTCGGATCTTAGCAGAACTGGTCCTGTGGAAAGAGACATTGAGCAGGTATCAACCATTTCTCGAGTTC AATGTTAGCATCGTGCTTCAAATTTTTTTCTGTTTTGGTTGTGTTTTCGTTGCTAGGGTACTGTTTGCTTTTAGATTTTG TGTATCTATGTAGTTCACTGTGTCAGTGGTGTTGTTATTTGCTGTTGTTGTGATAACTGTTGTTGCTGGATAGAAGTTTG AGGAAATAGGTAATTGATTTAGTTTTTGCTTGGAGTGCAAAATTCTGGTTATGTTAATGGGAATCTAGTTCCATTAAGTT TGAGTGCAGCATTTGCTCAAGTCAGTTTAGATAGAACTAGTGGCTTTATAATTGACCTGGAAAATTTCACGGTCTATCGA ATTTAGTTAATGAAGTATGTCGATGTGTGTTTAGATGTGTTAGGGCTTCAGAGTGTTTTTTGAAGATTTGGCTGGCTCTT TTGTGAACAAAAATATTATAGAGTTTTGGCTATGGGGATATTAAATTGTTTTTGTTGTTTCGCTAATTTGATCATGCGTG GATCGTGATGTTTAATTATATTTTCTTTTACGGATCATTCGAGTTTTTAATACCATGTTCTGTTATGGAAATTTAAGGCG AGTGTAGTTTACTATTACTATTTAAGTAAGAGTAGTGCTGGGAAGTGACTTTGAAGCCCACATTCTCATTGAGAAGAAAA AAATGGCTACTAATAATAGAAAGCGTAAATAAATAGAAAGAGATAAATAGTACATACTCATGATTATTAACACATCTTTA AAACTAAAAAAGTGTATATATATTTTATTTGTTTAACCATTAAAATTTTCTAAAGTTTATTTTGAGACTTGAGAGTACTA ACTAATTAATCTATGATCATACTAAGTTTACCTACCCCATAGTCACATACTCACATACCATGTATTTGACCAAGTGACGT CCTACGTATGGAAGAGTTTTATGTACTTGGTAAATATGTTTTGAACTTCAGCAGGATCTCTTGTTACTTATCAACCAAGT GTTATATATGTGCTATGCTTGTCCTGTAATTCCTCAATCTTATAAGTCTTACCATGACTGAACTCCTTTATTGATCTTAA ATGACAGGCAATTACTGCTTTAAAGAAAGGGGCTTGCTTGCTCAAGTATGGAAGAAGGGGGAAGCCAAAGTTTTGCCCCT TTCGGCTATCCAATGTGAGTTTTTAACTTCTCTTGGGTAGATTTAAGTTTATCCACGTTAAAGTGTGTCTCAATTTTGTT TTCCTGAAGATTTGTATTCGGCATTAAAAACTTTCAGAACCAAGCTTAGACTCAGTCTTTCTACTCTTTATTTTGTATGT TCTATAAATAATTGTGGAAGTATTTCTTCTAAATGCAGTAGGGGGAAGATAGAAGGGGTCCTTTAAGCTGAAAGACAGGG TGAACTATTTGTGGAAGAGAGGAGCTGAAATGAAAAATATTCAGCTGATAAGTTAAACAGTGAAAAACATGATATTCCAA AACTGTATGCTCTAAAATTAGAAATACAATGCTACAGAAAAATCTATCAATCAATGGCTTAACAGCAATTAGGTTACCTT GAGATTAGGTTTCCAAAAGCGTTTGCAGTAACTTCATTATGAAAATTTGATAAGATCACAGTGATTATGGTATTGTGCCT AACTGCTAAATGAGTTTCCGGCAACAATTTGAAGACTTGATTTTGTTTTTACCAAACCGGGTAGAGTGGGCAGCCTTGAC TAGTCTAACTGATGAGACTGATTTGATCTGCAAGAACCCTTCGTGCCAATATTTATAAACGGAAAGCTATCTTTCAACAC AAGAAGCTAAATCTTATAATGGCAAGCACTCAAATCCTCATAACTAGAATGTAAATTTGAATCTAAGCTTACATGTTACC TTATTAAGCCCCACATCGTGTCAAACACTGCTGTATTTGGTGGTTATGCTTGCATTAATAGAATCTTCTGCATGACATTT CATGGCTTGAAAGCCATATGATTATTTTGCTACTGCCATAACATTGCTTATCGTTTATTTTATAAATTTTCCATAAATTA TTTGTTTCTATTACATAAAGGATTGTTTTTAGATATTTTCCTGTTGCAAAGAATTTGAAGTATTTGATATTGCTATTTTT TCAGGATGAATCTGTTTTGATATGGTTCTCTGGGAAAGAAGAGAAGCACCTTAAACTGAGTCATGTCTCTAGAATTATAT CTGGACAACGCACGGTAGATTTTTAAATTGATTGTGAAATCATTATACTGTTAACCTTTTCAGATTTAGCCAACAGTGTG AGCCTTGTCAGCCTGGTTTCGATACGTAGTTGTTAAGTTCTATTTGATGTTTGTATGATTAACACAAATTGTGTTACTTC TCTGGTATGCAATCTTATGATCTCCATTTGCTCGAAGTCAAGATATATGAATGATATCTTTTATTACCACCTACTAGTAA ATAGTAATTGGCTTTATTTTTTACTTTATGTTGTATTATGAATATTTACTTGCTTGTTTATGGCAGCTATTGGGTTTTTG TTTTGCTTTAAGGAACATGCTGATGATTTTGTATTGTTTCAGTGTCCTATTCTAATAAGTTAATATTTATGTAAAAAGAC CTTACTCATACATGAACTCAAGATTTTCTATTGAGCATGTGCATGAGTGTGTTTAATAATTTTAAATATATTGGTAGTTC CTTCTTGACTTTGGGCATCATCTGTTAATACATATCAAGTGATAAGGTGAGTATGATTAATAAAACATGGTCCCTATTCT TTTCAGCCTATCTTTCAAAGATATCCGCGGCCTGAGAAGGAATACCAGTCGTTTTCTCTTATCTACAGTGATAGGTCACT GGACTTGGTATGGATTTCTTCATTTCTCTCTATTTTGGGATTTTTGGCTGTAGTTGGCCTATTGGTTTGCTTGTACTATG TTCTTGGTATTGTGAACAGTGTATTTTGTCTGTAAAAGCTTTACACAATCTAGTGATCTGATTCTCTTCTACTAGATATG CAAGGATAAAGATGAAGCTGAGGTTTGGTTCAGTGGTTTGAAAGCATTAATTTCACGAAGCCATCATAGAAAATGGAGAA CAGACTCAAGAAGTGACGGTATTCCATCTGAGGCTAATAGTCCTCGAACATACACAAGAAGAAGTTCTCCCTTAAATTCT CCATTTGGAAGTAATGAGAGCTTGCAAAAGGTAATACATATTATCCATGTCTTTCATATTTTCTTCCAATTTACTCCATT GCGGTTGAATATGTTTATTTAGAGAATTTTCGTTTGTCCTTTTCAGGATAGTGGGGATCACCTTCGCCTCCATAGCCCAT ATGAGAGCCCCCCTAAAAATGGTTTGGACAAAGCATTAGATGTGGTCTTGTATGCTGTTCCTCAAAAGGGTTTCTTCCCT CCTGATTCAGCCAGTGCTTCAGTCCACTCTATATCATCCGGAGGATCAGATAGTATGCATGGTCACATGAGGACGGTGGG TATGGATGCTTTCAGGGTTAGTCTGTCAAGTGCTGTTAGCTCATCTAGCCAAGGTTCTGGTCATGATGATGGTGATGCTT TAGGGGATGTTTTCATTTGGGGGGAAGGCACAGGTGATGGTGTTCTGGGTGGTGGGAATCATCGAGTTGGGAGTTCTTTG GGTGTAAAAATTGATTCTCTATTTCCTAAAGCCTTGGAATCTGCAGTAGTTCTTGATGTACAGAATATTGCTTGTGGCGG ACGACATGCGGCCTTAGTGACCAAACAAGGTGAAATTTTCTCCTGGGGTGAGGAATCAGGAGGCAGGCTTGGGCATGGTG TTGACTCTGATGTTCTCCAACCAAAGCTTATAGAAGCTCTAAGTAATACAAATATTGAACTTGTGGCTTGTGGGGAGTAC CATACTTGTGCTGTGACCCTTTCTGGTGATCTTTATACATGGGGTAATGGCACATACAATTATGGTCTTCTGGGACATGG AAATCAAGTCAGCCACTGGGTCCCAAAAAGAGTAAATGGCCCCTTGGAAGGCATACATGTTTCATATATTTCATGTGGAC CATGGCACACTGCTGTTGTAACATCTTCTGGGCAATTATTTACTTTTGGTGATGGTACATTTGGTGCTTTGGGTCATGGT GACCGAAAAAGTGTTTCAATACCAAGGGAAGTAGAGTCCCTCAAGGGTCTTCGTACTATGCGGGCTGCTTGTGGTGTTTG GCATACTGCTGCAGTTGTGGAAGTCATGGTTGGAAGTTCGAGTTCCAGCAACTGCTCTTCAGGGAAGCTGTTTACTTGGG GGGATGGAGACAAAGGTCGACTTGGGCATGGTGATAAGGAAGCAAAACTTGTTCCAACCTGTGTTGCTCTCGTTGAACAC AACTTTTGTCGAGTTGCTTGTGGACATAGTCTGACTGTTGTACTTACCACCTCAGGCCATGTCTATACCATGGGAAGTCC TGTCTATGGTCAGTTAGGAAATCCACAAGCTGATGGGAAGCTACCAACCCGCGTTGAAGGGAAATTGTCAAAGAGTTTTG TGGAGGAGATAGCTTGTGGTGCTTATCATGTTGCGGTTTTAACTTTAAGGAACGAAGTCTACACTTGGGGTAAAGGTGCA AATGGCCGTTTAGGCCATGGAGATACAGATGATAGAAATGCCCCAACATTAGTGGAAGCTCTTAAAGAAAAACATGTCAA AAGTATCGCCTGCGGAACTAATATCACTGCAGCTATCTGTCTGCATAAGTGGGTTTCTGGTGTTGACCAGTCTATGTGTT CTGGTTGTCGTATGCCGTTTAATTTCAAAAGGAAACGCCACAATTGTTATAACTGTGGCCTTGTTTTTTGTCATTCATGT AGCAGTAAGAAGTCTCATAAGGCTTCAATGGCGCCAAACCCCAATAAACCTTATCGTGTCTGTGATAGTTGTTTTAATAA ACTTAGGAAAACTGTAGAAACTGATTCTTCATCTCACTCTTCTATTAGCAGAAGAGGAAGTATAAATCAAGGGTCTGAAA TGGTTGATAAGGATGATAAATTTGATTCCAGATCTCGTAATCAACTTGCCAGGTTTTCTTCAATGGAATCATTCAAACAA GTGGAAAGCAGATCTTCAAAGAAAAACAAGAAATTGGAATTCAACAGTAGCCGTGTCTCGCCTGTTCCAAATGGGGGTTC ACAATGGGGAGCACTGAATATTTCTAAATCTTTAAATCCTGTTTTTGGATCATCAAAGAAATTTTTCTCGGCTTCTGTTC CTGGATCTAGAATTGTTTCCCGGGCAACATCTCCAATATCTAGACGGCCTAGTCCGCCACGTTCAACTACTCCAACCCCA ACACTGGGAGGTCTTACATCCCCGAAAATAGTTGTGGATGATGCTAAGAGGACTAATGATAGCCTCAGTCAGGAGGTTAT TAAATTAAGACAGCAGGTATCTTTTTTATGCATTCACTTACAATATTCCCTTTCTTGTTATAAAGTTCAAATAGAATTTT AACAAAAAAGGACTTATAGTTTGCACCCGATTTTATTCAACCAATTCTTTTCTTATGACATTAGTTTCTATGAATTTGTC TGATGAAATGGCATAGACAACATGTGGAAACAAAAGCAAGGATCTTGGATGTTGTTAGCAAGATGCCTCCTCATTGAGCT GACTTGTTTACTTTCTGCATTGTCTGAAAATACCTAATAGATGAATCACAATTTAAATTCCAACTACCACTTAAATGCAC TTGCTAGAAATGTAGTATCTCCATGTAATTAAATATATATACTACAATGCAAAATGTTTAGCAACATCATTGTTGAATGT CACAGTTCTATGATTTAACCTTTTATTTAATAATTACAAAGAAAAAAAATTAACAGTGGGTTGATTTTGATTCTTACAGA GCACTTCTTTTTTTAAGGGTTTCAAATAATCAATTATAGAGCTTATTCTCATCACCCATCAACAATTTTTTTTTCTCATA AATAGTTGACTGTTCGATATAGTGGATGCCTGATATCATTAATTTACTTTCATAGGTGGGAAATAATTTGTAGACATGCA ACAAGGATGTTTAACTCACATGGTTGTCTATTTGTTGTGAGCGTTAAACATTGAAATTGTTTCCCCCCTTTTAGGTGGAA AGCCTGACTCGGAAAGCCCAACTTCAAGAAGTCGAGTTGGAAAGAACAACTAAACAGCTAAAAGATGCAATAGCAATTGC CGGGGAAGAAACTGCCAAATGTAAAGCAGCAAAGGAAGTAATCAAGTCTCTGACTGCCCAGGTAGAAACTTTAATCCCTT GGAACACTTTAACAAATTAGACTACTATATATTTGACACAAATCAGCTGTCATGTCCTATAATAACTTATCTTAGAAAAA ACAATATGCATTGAAGATGCACTGAGCTAACACTCATCTACCCTAAATATAAATTGTAAAGTCATAAGATGTTAAAGTCA GACCCAATATCAATTTTAAGCCAAACCAAAGTAACGAAATTTTTAATGGCTTAATACATCAGAAGGCCCCTGAAATTGTA AAGGAAATCAGTTTCAGGGCCTGAAAAATTTTCGCATCAAATTGGGTCCTTAAGAAATTTTTTTTAATTCAATTAAGGCC AAATCTCAATTTTGTCCTAGTCATCAATTACACGTGACTTTTATAATTTTTTTAAATTAAAAAAAACTAAAAATTATTTT TAAAAAAAAATTAAATTTGGCCTTAAAAAAAATTAAAAATATTTGCCCTAAAAGAAAATTTAAAAATTTGGCTTTTAATT CAATTAAAATTTTATTTGGCCTTAAAAAAAATAATTTTTTTTAATGAGTTGGAATTAAAAATAATTTTTATTTTATTTTT AATTAAAAAAAATTATAAAAGCCACGTGGAATTGATGACTGGGATAAAATTGAAGGCTGGCACACTTTGGCCTTAATTGA ATTAAAAAAAATATTTCTAGGGACCCAATTTGATGCAAAAAAATTTCAGGCCCTGGATTTGATTCCCTTTACAATTACAG GGGTCTTCTGATGTATTAAGCCTATTTAAGCTCTTATCTTCTAACAATTTTTTGTGTGTCGATTTTTCATGTATCATAAC TAACTAATCCAACATTTTTTTTGTTTCTTCCGCTTAATAGTTGAAGGACATGGCTGAGCGGCTACCTGTAGGAGCAATTA GAAATGTCAAATCACCTTCTCTAGCTTCTTTTGGTTCCAATCCTTCTTCCAATGAAATTGGCTATGCTTCCATTGATCGA TTAAATATTCAAGCAACAAGCCCAGAAGCAGACTTAGCTGGATCAAATAACCAGTCACTTTCAAATGGATCAAGCACGGT CAGTAATCGCAATGCAGGTCACACTAAACAGAGCCAGTCAGATTCTAATAATAGAAATGGGAGCAGAACAAAGGATAGTG AATCTCGTAATGAGAGTGAATGGGTTGAGCAAGATGAACCTGGTGTATATATTACCCTCACCTCCCTACCAGGAGGTGTA AAAGATCTTAAGAGAGTTCGATTCAGGTATGGAATGCTCTTTAGACATTGATTTTCTGTCAGCACACAGAACTTCTGTGA AATTTGGTCATGTAGAATATGATATGCTTTTATTGAAAAAGGAAAAAGTAGAACTTGGGATTCATGGTGTTAGGACTATG ACAATAACTATTCCTAGGTCAAATGACAAACTAATGGCAATTTAGTCTCTTTTAGGGCCTGAAATATTTTGATGCAGTTG AGTGCTTTACTTCAATGGATGAGTGAGTTATAGTGTTCTACTTGCTTGTGTACCTTTTAGCTGTCGAGCAACTTTGCTTT CCGTTGTGTTTGAGGAGCCAGAATTATGATTGCTTCCCAGCTTGGCAAAAGTTTATTTTTGCCATGCTAACATGATTTTG ATCCTTCACTGGCTCAGCAATTACTAACGGGAGTAACATTGAGAATAGAAATGGATTGTGTTCTATTATTGCCAAGAACA TTCCTGACTGGTCTATTTGTCATGTTTCATGTCTTGATCAGCTGCAGATTTACTTTATCTTGAAACTATATAGTAATCTC CCACCATAATGTTTCATTCTATAATTTGGTATCTGCTGGGACAAATTAGAAAACTACATAGTATTCTATGATCGGACAAA ATTTGACGCAGCTTCATACATGTTTTTACTAATGTCCAATTATAACATGACACATGGGTTAGAAAATGGGAAGTTGAGGG ACGTTATCACATTAATAAAATATGAAGAAAGTAGATGATTGAACTTTTAATTAGGAAACAACATGAACAATATATATATA TATATAGTGCAGTATATATAGATAGATAGATAGATAGATAGTACAATATCTAAGTTTTGTCCTTTATGATTATCCATTTT TTAATGAGTTTTGACTATAATGTTGGTGAATGCAGTCGAAAGCGGTTCAGTGAGAAACAAGCAGAGCAATGGTGGGCTGA GAACCGGGCAAGAGTATATGAACAGTACAATGTACGAATGATTGACAAGTCCAGTGTTGGTGTTGGGAGTGATGACCTGG CTCATTGACATGACGACCTGTAAATGAGATGTTTTTTGACATTTTTGCTTGAAATAGAGCAAGATCATGGTACTGATCAA TTACATTTGGCTTCCATCTATAGTATAAAGAATTGAGGGAAGCTGGGAACTGGTATAGTAGGAGAGAATAGGGATTGATT GTGACCTTGTAAGTCCTCTTCTTTTTCCAATTTGATTTCACTTTCCATTTTTTCCCTATATGTACCTTGTGTGGGGGTTG AGGGTGAGAAATGTAAATTCTTAGTAGGTTGCAAGCTCTGCTTGAAAGGAGCTGCATGTAAATCTCATAAGCGAATGCAT TTGCAAATTTTTCTTATACATGGGTTATAAATTCTTCACCTATGGGTTAAGCGGCTCTTATAGCTTGGATTAGCTTCTAT TTTTTGAGAGTCAATTATGACATGCAGAAGCTACTCATAGAAGATTCTATCCAAAATTGATTTTGGCTTAAGAATTAATT GTAGAAGGATTTCTTAACATGGAAGTGATTTTTCTTACTCTTGCAAATAGCAATAATACCTAGTAGGGAACATATTTAAT GAGAGGATTCATTTATTCTGAAAGGGAAGCTTACTTAATTCTGATCTTATAATTTTAGATAGTTATGAGAGTTTTTGGTC CCTATATAATGAAGAGTTTTGATTTTCGTTCCTATTCGGAGTCAAGTTGCAAAAAACACTCACACGTCTAGAGAAATATT CTACTTTTAGTCCTTGCTTGAAAATCATATATGATGACCATGCCACGGGTATGATAAAGATGAACCATGCCA
CDS sequence (LotjaGi1g1v0049200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGGGTTCGGAATGACTTCGGATCTTAGCAGAACTGGTCCTGTGGAAAGAGACATTGAGCAGGCAATTACTGCTTT AAAGAAAGGGGCTTGCTTGCTCAAGTATGGAAGAAGGGGGAAGCCAAAGTTTTGCCCCTTTCGGCTATCCAATGATGAAT CTGTTTTGATATGGTTCTCTGGGAAAGAAGAGAAGCACCTTAAACTGAGTCATGTCTCTAGAATTATATCTGGACAACGC ACGCCTATCTTTCAAAGATATCCGCGGCCTGAGAAGGAATACCAGTCGTTTTCTCTTATCTACAGTGATAGGTCACTGGA CTTGATATGCAAGGATAAAGATGAAGCTGAGGTTTGGTTCAGTGGTTTGAAAGCATTAATTTCACGAAGCCATCATAGAA AATGGAGAACAGACTCAAGAAGTGACGGTATTCCATCTGAGGCTAATAGTCCTCGAACATACACAAGAAGAAGTTCTCCC TTAAATTCTCCATTTGGAAGTAATGAGAGCTTGCAAAAGGATAGTGGGGATCACCTTCGCCTCCATAGCCCATATGAGAG CCCCCCTAAAAATGGTTTGGACAAAGCATTAGATGTGGTCTTGTATGCTGTTCCTCAAAAGGGTTTCTTCCCTCCTGATT CAGCCAGTGCTTCAGTCCACTCTATATCATCCGGAGGATCAGATAGTATGCATGGTCACATGAGGACGGTGGGTATGGAT GCTTTCAGGGTTAGTCTGTCAAGTGCTGTTAGCTCATCTAGCCAAGGTTCTGGTCATGATGATGGTGATGCTTTAGGGGA TGTTTTCATTTGGGGGGAAGGCACAGGTGATGGTGTTCTGGGTGGTGGGAATCATCGAGTTGGGAGTTCTTTGGGTGTAA AAATTGATTCTCTATTTCCTAAAGCCTTGGAATCTGCAGTAGTTCTTGATGTACAGAATATTGCTTGTGGCGGACGACAT GCGGCCTTAGTGACCAAACAAGGTGAAATTTTCTCCTGGGGTGAGGAATCAGGAGGCAGGCTTGGGCATGGTGTTGACTC TGATGTTCTCCAACCAAAGCTTATAGAAGCTCTAAGTAATACAAATATTGAACTTGTGGCTTGTGGGGAGTACCATACTT GTGCTGTGACCCTTTCTGGTGATCTTTATACATGGGGTAATGGCACATACAATTATGGTCTTCTGGGACATGGAAATCAA GTCAGCCACTGGGTCCCAAAAAGAGTAAATGGCCCCTTGGAAGGCATACATGTTTCATATATTTCATGTGGACCATGGCA CACTGCTGTTGTAACATCTTCTGGGCAATTATTTACTTTTGGTGATGGTACATTTGGTGCTTTGGGTCATGGTGACCGAA AAAGTGTTTCAATACCAAGGGAAGTAGAGTCCCTCAAGGGTCTTCGTACTATGCGGGCTGCTTGTGGTGTTTGGCATACT GCTGCAGTTGTGGAAGTCATGGTTGGAAGTTCGAGTTCCAGCAACTGCTCTTCAGGGAAGCTGTTTACTTGGGGGGATGG AGACAAAGGTCGACTTGGGCATGGTGATAAGGAAGCAAAACTTGTTCCAACCTGTGTTGCTCTCGTTGAACACAACTTTT GTCGAGTTGCTTGTGGACATAGTCTGACTGTTGTACTTACCACCTCAGGCCATGTCTATACCATGGGAAGTCCTGTCTAT GGTCAGTTAGGAAATCCACAAGCTGATGGGAAGCTACCAACCCGCGTTGAAGGGAAATTGTCAAAGAGTTTTGTGGAGGA GATAGCTTGTGGTGCTTATCATGTTGCGGTTTTAACTTTAAGGAACGAAGTCTACACTTGGGGTAAAGGTGCAAATGGCC GTTTAGGCCATGGAGATACAGATGATAGAAATGCCCCAACATTAGTGGAAGCTCTTAAAGAAAAACATGTCAAAAGTATC GCCTGCGGAACTAATATCACTGCAGCTATCTGTCTGCATAAGTGGGTTTCTGGTGTTGACCAGTCTATGTGTTCTGGTTG TCGTATGCCGTTTAATTTCAAAAGGAAACGCCACAATTGTTATAACTGTGGCCTTGTTTTTTGTCATTCATGTAGCAGTA AGAAGTCTCATAAGGCTTCAATGGCGCCAAACCCCAATAAACCTTATCGTGTCTGTGATAGTTGTTTTAATAAACTTAGG AAAACTGTAGAAACTGATTCTTCATCTCACTCTTCTATTAGCAGAAGAGGAAGTATAAATCAAGGGTCTGAAATGGTTGA TAAGGATGATAAATTTGATTCCAGATCTCGTAATCAACTTGCCAGGTTTTCTTCAATGGAATCATTCAAACAAGTGGAAA GCAGATCTTCAAAGAAAAACAAGAAATTGGAATTCAACAGTAGCCGTGTCTCGCCTGTTCCAAATGGGGGTTCACAATGG GGAGCACTGAATATTTCTAAATCTTTAAATCCTGTTTTTGGATCATCAAAGAAATTTTTCTCGGCTTCTGTTCCTGGATC TAGAATTGTTTCCCGGGCAACATCTCCAATATCTAGACGGCCTAGTCCGCCACGTTCAACTACTCCAACCCCAACACTGG GAGGTCTTACATCCCCGAAAATAGTTGTGGATGATGCTAAGAGGACTAATGATAGCCTCAGTCAGGAGGTTATTAAATTA AGACAGCAGGTGGAAAGCCTGACTCGGAAAGCCCAACTTCAAGAAGTCGAGTTGGAAAGAACAACTAAACAGCTAAAAGA TGCAATAGCAATTGCCGGGGAAGAAACTGCCAAATGTAAAGCAGCAAAGGAAGTAATCAAGTCTCTGACTGCCCAGTTGA AGGACATGGCTGAGCGGCTACCTGTAGGAGCAATTAGAAATGTCAAATCACCTTCTCTAGCTTCTTTTGGTTCCAATCCT TCTTCCAATGAAATTGGCTATGCTTCCATTGATCGATTAAATATTCAAGCAACAAGCCCAGAAGCAGACTTAGCTGGATC AAATAACCAGTCACTTTCAAATGGATCAAGCACGGTCAGTAATCGCAATGCAGGTCACACTAAACAGAGCCAGTCAGATT CTAATAATAGAAATGGGAGCAGAACAAAGGATAGTGAATCTCGTAATGAGAGTGAATGGGTTGAGCAAGATGAACCTGGT GTATATATTACCCTCACCTCCCTACCAGGAGGTGTAAAAGATCTTAAGAGAGTTCGATTCAGTCGAAAGCGGTTCAGTGA GAAACAAGCAGAGCAATGGTGGGCTGAGAACCGGGCAAGAGTATATGAACAGTACAATGTACGAATGATTGACAAGTCCA GTGTTGGTGTTGGGAGTGATGACCTGGCTCATTGA
Protein sequence (LotjaGi1g1v0049200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGFGMTSDLSRTGPVERDIEQAITALKKGACLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIISGQR TPIFQRYPRPEKEYQSFSLIYSDRSLDLICKDKDEAEVWFSGLKALISRSHHRKWRTDSRSDGIPSEANSPRTYTRRSSP LNSPFGSNESLQKDSGDHLRLHSPYESPPKNGLDKALDVVLYAVPQKGFFPPDSASASVHSISSGGSDSMHGHMRTVGMD AFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGNHRVGSSLGVKIDSLFPKALESAVVLDVQNIACGGRH AALVTKQGEIFSWGEESGGRLGHGVDSDVLQPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNYGLLGHGNQ VSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSIPREVESLKGLRTMRAACGVWHT AAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEHNFCRVACGHSLTVVLTTSGHVYTMGSPVY GQLGNPQADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNAPTLVEALKEKHVKSI ACGTNITAAICLHKWVSGVDQSMCSGCRMPFNFKRKRHNCYNCGLVFCHSCSSKKSHKASMAPNPNKPYRVCDSCFNKLR KTVETDSSSHSSISRRGSINQGSEMVDKDDKFDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQW GALNISKSLNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKL RQQVESLTRKAQLQEVELERTTKQLKDAIAIAGEETAKCKAAKEVIKSLTAQLKDMAERLPVGAIRNVKSPSLASFGSNP SSNEIGYASIDRLNIQATSPEADLAGSNNQSLSNGSSTVSNRNAGHTKQSQSDSNNRNGSRTKDSESRNESEWVEQDEPG VYITLTSLPGGVKDLKRVRFSRKRFSEKQAEQWWAENRARVYEQYNVRMIDKSSVGVGSDDLAH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 1091 | 1080 | 0.0 | – | |
| PANTHER | 12 | 1091 | 1080 | 0.0 | – | |
| CDD | 18 | 128 | 111 | 2.281E-52 | – | |
| Gene3D | 18 | 137 | 120 | 8.4E-22 | ||
| SUPERFAMILY | 19 | 127 | 109 | 3.26E-28 | – | |
| Pfam | 21 | 127 | 107 | 1.9E-7 | ||
| MobiDBLite | 136 | 190 | 55 | - | – | |
| MobiDBLite | 142 | 172 | 31 | - | – | |
| Gene3D | 262 | 484 | 223 | 4.9E-57 | ||
| SUPERFAMILY | 265 | 655 | 391 | 8.2E-97 | ||
| ProSiteProfiles | 266 | 327 | 62 | 12.052 | ||
| PRINTS | 311 | 324 | 14 | 6.9E-17 | ||
| ProSitePatterns | 314 | 324 | 11 | - | ||
| Pfam | 328 | 376 | 49 | 4.4E-11 | ||
| ProSiteProfiles | 328 | 379 | 52 | 15.228 | ||
| PRINTS | 330 | 346 | 17 | 6.9E-17 | ||
| Pfam | 379 | 431 | 53 | 1.3E-10 | ||
| PRINTS | 380 | 396 | 17 | 6.9E-17 | ||
| ProSiteProfiles | 380 | 434 | 55 | 14.122 | ||
| PRINTS | 421 | 437 | 17 | 6.9E-17 | ||
| ProSitePatterns | 421 | 431 | 11 | - | ||
| Pfam | 434 | 483 | 50 | 8.7E-12 | ||
| ProSiteProfiles | 435 | 486 | 52 | 12.635 | ||
| PRINTS | 437 | 451 | 15 | 6.9E-17 | ||
| Gene3D | 485 | 664 | 180 | 4.6E-45 | ||
| Pfam | 498 | 546 | 49 | 2.2E-12 | ||
| ProSiteProfiles | 499 | 549 | 51 | 15.107 | ||
| PRINTS | 539 | 557 | 19 | 6.9E-17 | ||
| Pfam | 549 | 598 | 50 | 8.8E-8 | ||
| ProSiteProfiles | 550 | 601 | 52 | 13.097 | ||
| PRINTS | 597 | 618 | 22 | 6.9E-17 | ||
| ProSiteProfiles | 602 | 653 | 52 | 14.705 | ||
| Pfam | 603 | 650 | 48 | 8.3E-14 | ||
| SMART | 652 | 721 | 70 | 9.1E-19 | ||
| SUPERFAMILY | 654 | 725 | 72 | 3.5E-17 | ||
| Pfam | 654 | 720 | 67 | 3.0E-13 | ||
| ProSiteProfiles | 658 | 720 | 63 | 11.764 | ||
| CDD | 663 | 716 | 54 | 2.29794E-17 | – | |
| Gene3D | 665 | 721 | 57 | 5.8E-15 | ||
| MobiDBLite | 726 | 801 | 76 | - | – | |
| MobiDBLite | 726 | 741 | 16 | - | – | |
| MobiDBLite | 742 | 757 | 16 | - | – | |
| MobiDBLite | 786 | 801 | 16 | - | – | |
| MobiDBLite | 831 | 859 | 29 | - | – | |
| Coils | 863 | 904 | 42 | - | – | |
| Pfam | 914 | 947 | 34 | 1.6E-17 | ||
| Coils | 919 | 939 | 21 | - | – | |
| Pfam | 955 | 1024 | 70 | 1.4E-22 | – | |
| MobiDBLite | 982 | 1018 | 37 | - | – | |
| MobiDBLite | 982 | 1035 | 54 | - | – | |
| MobiDBLite | 1019 | 1035 | 17 | - | – | |
| Pfam | 1030 | 1085 | 56 | 2.4E-29 | ||
| ProSiteProfiles | 1031 | 1086 | 56 | 35.54 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi1g1v0049200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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