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LotjaGi2g1v0134600.3

Overview

Field Value
Gene ID LotjaGi2g1v0134600
Transcript ID LotjaGi2g1v0134600.3
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|I1JDG4|I1JDG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0134600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:48802245..48810028) extracted from Lotus japonicus Gifu genome v1.2.

CTGTCTGATCTTTTATTTTTGTGGTTTACAATGTTGCTTTTTTCATTATGCAGGCACTAATTGCCTTGAAAAAGGGTGCT CAACTGCTTAAATATGGTCGTAAGGGAAAGCCCAAGTTTTGCCCATTTAGACTTTCCAATGTAAGTTAATTGAAAGGTCT ATCTGAAATATGTTTGTGGATTCTCCATTTCGTTTCCTTTTAATCTGCTTGGTCAGACAATGATTAACTGAATATATTAA ATACTCAATTATTAATCTATGGGAAACACTTGCTTTTGCATGTTTACTTTGTTATATTATTTGAGGGATACTGCGCAAAA TACTTTTAGTTTGTTTTTCTTATATTTTATATTCCCTACATGTTATGAGGTATTGTGTTGCTCTTGATTGGGATTAAATT CTGACATACTGGGTGTGCTCTGTGTTTTCGTTTCACCAGTAGGGAGTTACTATTAATTTTTTATCACTGGCTAACTGATA GAACTTGCTCAGAATACAAACGCAAAATTGTTTTATAGACAGGAAATTCTCCATGCTCCATAGTTGATTTGCTGTGCTAA CAGTTACTCAGCCATTGAACAAGAACAAAAGGAAATAAGATAGCAGTGAGGTTTTTGAGAAACCTAGAACCCCCCCTCCT TAATTTCATTTTCAATTCTCATGCCAAACCCTGTAATCACTCCATCCTGTTAATAATATCCTATCATCTCTAAATCCTTA ACTAACTATTCCAACTCTAACCAAACAGTTACGTTAGCTAACACTAACTCTCATGTGGGGACTGTAATTTATAGCCTGTT CCTAAATTTTTTTACGTCTATTTTCTGTATCCCTTTACTGCCAGAGATTTAGATGACTATGTGTTGATGCATTTAATTTT ACTTCCATGCCGTATTTAAATTTCACTTTATGTGTAAGATCTGTTCTTTCATGAGTTGGCATGGGGATGTCAGTTGGCTC ATGCAATTTAATGGCAGATTGCAGGTCATATTTTTCATTGCACTCAATATTTGTGTGGTTCTGAACTGATTTTAGGTTCT TCTTTTTTAAACTCTTTGGATTGGGATTGAAATAATTTATTTGGTTTGTTCACCATGCAGCTCAGAAATAGGGAGTTGAT TTTCGCACCCCATGCACCTAATTTAGTGTTAATTTCCCAAAATGCCCTCCGCTTCATTGTTTACCGGTATCTAAAACCCG GTACACCTTTTTGTGATTAACGTACCGGGAATTAAAACCTCGTATATTAAAAATAAAAAATTTAAATTTGCTTCGGGGTT CTTTTCTTATTCCCGGTACAGCTTTTGGTGATTTACAGCATGGGAACCTAAGTTCCCGGAATTTAATTAGAATTGTACCG GATTTTAAAATCCTGCTAGTACACACTAACAATACCGGGTTCTAAAACACAGTATGTTAAAAATGCATTACTGGATTTTC GAAAACCCTGTAATGTGTTTTTAAATATCGGGTTTTAGCTCCTGGACTTAAAACATATATATACCGGAAATTTGAAAATC TGGTAGATGAGTTTTTAAGATACGGTTTTTTGAAAATCCGAGAGATGAGGGGGTGAGTACGTGGAAGAGGAAGGGATTTA TGGAATTTTAAAATGAAGGTGGGTGAGAGAATTGGGTTGTTGGGGGTGTTAATAACAACACCCTTAGAAATATATAGTTA TGCAGTTTTAAGATTAGTTTGAAATCTTTTATTATATTTTTGCTGCCAAAAAATTAGAAAATAGCATTTGATTTCAAAGG TAGGGCACCTGGTAGCTTGTTTTTGCATGCCACATTTTAGGTTCATTATAATCACTAGAGGTATAATAATAATAATTAAT TCTTAAATAAAAAAAAATCAAATATTTTTGTTAGACTCGGGTCAGATACACGGACTAGTTACTGGAGTTGCCTAATCCCC TAATTTGAGTAATGGTGCTACTGCTACCTTTTCTTGGTATTGCAGCTTTATAGCTGGACTAGCATTTCATGTTTGTTTTA TGCTTATGGCGTATTCTATGCTTCTGTGGTGGTAGGCGATGTTCTTAAACATTTTGTCCAGTATACTGGAATTTTTAGAC TTAATTGAATTATTTCTATGTGCACATTTAAATATACAAAAATGCAGGATGGATCAACTTTAATCTGGATTTCAAGTAGT GGAGAAAGAAATCTGAAGCTATCTTCTGTCTCAAGAATTATTCCTGGACAAAGAACTGTGAGATTTGTGGACTTCAATTT AATATTATACTTTGCCATGGATTCTGTGATTAACCAAAACCAAGTGATCTCATCAAAATTCTCCCCATAAGCTTACTTTT ATCTGTTCTGTATTTTCTTTCCTGTATCTTTTCGCAGGCTGTTTTCAAACGTTACTTGCGTCCTGAAAAGGAGTATTTGT CCTTTTCACTTATTTATGATAGCGGAAAGCGATCCCTTGACCTGGTTAGTGACAATATATGTGATTCCATGGATAACTGC ATAATTATTTTGTTTTCATTTTCTGTGTCTTCCATTATTCTAAATAATTTCTGTGTTGCTTTTTAGATTTGCAAAGATAA AGTTGAGGCAGAAGCGTGGATTTCTGGTCTCAAATCACTGATCTCTTCTGGCCAAGGTGGTCGGTCCAAAATTGATGGAT GGAGTGATGAGGGCCTCAATCTTGATGTAAAAACAGCAACTTATGGTCGTTTTATTTAAATTCATTTGTGTGTTATATTA TAATAGACTTAGACCACGTTTGGAAGAGCTTATTTTCCTTAGCATTTACATGACATATAGATTCTATTCCATGATTGGTG CATTTTAAAAATAGATCAAAATTTGACAGGAGTTTTAAAAGTAGTACACTTTGGCTCTACTAAAAATGGTGCAACCAACA GAGTCTATTCCATTGCTTTTATCTGTTCCTTTCATTTTTATCTCTGTGCCCAACACTACCTTCGGGTGCATGTTTTTGAC AAGTCAGGATAGAGAGAACTTGTTAGTTATTTGATTCATTATATTAGTGATTATCGTTTACTGTAAGGAAAGCTAGTCTT TATTTCTCAGTTTATAGCCTTATTTTATTCATTATATGCTGCAGTTCCTCCGGTAGTCACTTACTTGTCCTCTTCTCTGG TCTTTTTTAGGTTTAAATTTAATTGTTTGGGTTGATTAGCAAACTCTAATTTTTTCTAGGATGTATCTTTTTGTGAATAA ATTCAACTGACTTTATGCTAGTTTTTACATTTTTTTACTACTATTGCCATTATGCTTTGTGATATCTCCCTGATGAAATT CATGGTAAGTTGCTCATAATTATTTCTGGCACAATTAATTTCAGGATAGCAGAGATTTAACATCAAATAGTCCAAGCGAC AGTTCAGCTAGTGCGTCACGAGACATTAGTTCTCCTGACGTTCCTGCGAGTCTTCCAAATACCTCACCAAAGTCCTTTTG GCCTGACAATATTGTAAATTCTGAAAGGTCACATGCACCATCAGACTCAACAAATATGCAAGTAAAAGGATCTGGTCCAG ATGCTTTTCGTGTCAGTGTTTCAAGTGCCCCCAGCACGTCTAGTCATGGATCTGCACCAGATGACTATGATGCTCTGGGG GATGTATATATATGGGGGGATATTATCTGTGAAAACGTGCAAGTTAGTGCCGATAAAAGTGTCAGTTATTTCAGTCCAAG GGCAGATGCGCTTATCCCCAAACCCCTAGAGTCCAATGTAGTTTTAGATGTACATCATATAGCATGTGGAGTTAGACATG CTTCTTTAGTCACTAGGCAAGGTGAGGTTTTTACGTGGGGTGAAGAATCAGGAGGACGCCTTGGCCATGGTGTTGGGAAA AATGTGGTTCAACCTCGTCTAGTTGAAGCATTGACTTCTACAACTGTTGATTTTGTTGCCTGTGGGGAGTTCCATTCCTG TGCTGTTACAGTGGCCGGTGAACTATATACATGGGGTGATGGTACTCATCATGCTGGGCTGCTTGGTCATGGAACTGATG TTAGTCATTGGATACCAAAGAGAATTGCCGGTCCATTAGAGGGACTTCAAATTGCATCTGTTGCCTGTGGTCCGTGGCAC ACTGCCTTGATAACTTTAAGTGGGCAGCTCTTTACATTTGGTGATGGAACTTTTGGTGTCTTGGGTCATGGTGATAGGGG AAACATTTCATGTCCTAGAGAAGTGGAATCCTTATCAGGGCTGAGGACAATAGCTGTTGCATGTGGAGTGTGGCACACTG CAGCCGTGGTAGAGGTTATTGCAACGCAAACTAGTGCGAGTTTATCATCAGGTAAATTGTTTACTTGGGGTGATGGAGAC AAAAATCGCCTTGGGCATGGGGATAAGGAGGCACGACTTAAACCAACTTGTGTGCCTGCACTTATTGAGTACAATTTTCA TAAAATTGCTTGTGGACACAGTTTGACAGTAGGCCTGACAATATCTGGACGTGTTTTTACCATGGGAAGTACTGTATATG GTCAGCTTGGGAATCCCAAGTCTGATGGAAAGCTGCCCTGCTTGGTTGGAGACAAGATTGCTGGGGAGTCCGCTGAAGAA ATCGCATGTGGTGCATATCACGTGGCTGTTTTAACATCCAAAAATGAAGTTTACACTTGGGGTAAGGGTGCAAATGGGAG ATTGGGTCATGGAGATCTTGAAGATCGAAAAACACCAACTCTGGTTGAAGCATTGAAGGACCGACATGTGAAATATATTG CATGTGGTTCAAACTACTCGGCTGCCATATGCCTTCATAAGTGGGTATCTGGTGCTGAGCAGTCTCAATGCTCTGCCTGT AGACAGGCATTTGGCTTCACTAGAAAGAGGCACAATTGTTACAACTGTGGACTTGTGCACTGCCATTCATGCAGTTCAAG GAAAGCATTAAGAGCAGCACTAGCTCCTAATCCTGGCAAGCCATATCGTGTTTGTGAATCTTGTTATGTAAAATTGAACA AGGTTGCAGAAACTAACCATAATAATCGGAGGAGTGCTTTGCCACGTCTGTCGGGTGAAAACAAGGATAGGTTAGACAAG TCTGAGCTAAGATTGTCCAAGTCAGTAATTCCTTCTAACATGGATTTGATAAAGCAGCTAGATAGTAAGGCAGCCAAACA AGGAAAGAAGGCTGATACATTCTCACTAGTTCGCTCCTCGCAAGGACCTTCCTTGCTACAGCTGAAAGATGTTGTATTCT CGACTGCTGTTGATCTGAAACGAACTGTTCCAAGACCGGTGGTTGCACCATCTGGAGTAAGTTCAAGGTCTGTGTCCCCT TTCTCTCAGAGACCAAGCCCTCCTCGTTCTGCTACACCTATTCCAACAACATCAGGGCTTTCCTTCTCCAAAAATATTGC TGATAGGTTAAAGAAAACAAATGAAATTTTAAATCAGGAAGTGCAGATGTTACGTGCTCAGGTGCGTTTTCCTTTCCTTC TCTCATGTGTATCAAGTAGCCAAAGTACCCTTCATTAACAATAAAACTATTGTCCATTTAAACTTTTGCTCTGCAATTTT GAGCCTGTAAATGAACCTTATGAAACATGAGCAGGATCTCTTTGCTCAATTTGCCAAAGAAGTTAAGGTCACATGTTCAT TAAAATATTTTTAACTTTTTTATGGTATCAAGAGAGGTCTAATTATTGATATCATTAGGTTGAGAGCCTGAGGAAGAGAT CTGAACTACAAGAGTTAGAGCTTCAAAGGTCAACAAAAAAGACACAAGAAGCTTTGGCACTGGCTTCTGAGGAATCTGCT AAATCTAAAGCTGCAAAAGAAGTTATAAAGTCACTTACGGCACAGGTATTTTTCTGGTTAATGTACTTCTGTTCTGTTGG AGCCAGATGTCTTTGAAATTATTTATTTTCATGTAGTGTTTCATTATTTGTTGCTTCACTTTAACTTTTCCTCATTATCA TTTGAATAAAATGGATATCAAGATTAACCCATGTATCAAATTGTAATTATATAATATTTTTTCACTGTCACAAGATTCTA AGAACTGATTTTTTATGAACAGTTATCATTCATGATCTTGGTGCATGGTATTTAAGAATTTACTTTCATTTTCTGTTTTG TTTTAGCTTCAATAGTATATTAAAAATGTTAAATTAATCTGTATGTCCTTATAGTTTCACTCAATTTGTATTTAAATCCT TGTAATTTAAAATGTTTTAATCCTATCCTTATAAATTTTTTATTTAATCCTTACACATTAACACTATTAAATGTTCTCTC AAGTATTAGTGCTAATGTAGTATTGCTCACATGGAAATGTTTATTTTTTATTTTCATCTTTTTCCTTTTTTTAAGTACCA TTAGTTTCTTAATCCCTAAATTCTGATTTTGTTTTGTGGATCCATATTGCATGTGAGCTTTTATTCTTCTTAGATTTAGA TATTATTTTCACGTTTTAAGAAACATTTACATGTCTCATTTTTTATGTTATTTTGTCATGTTTAGTTGTCCACAAAAGCA AGTTTACCTATGTTAAGACTTTTAGACTAAGGAAATGTCTATCATTTCGCAAAGAGCGCTTTTCATTTTTTTTTCTTGCA CTGATTTTTGTTTGACAAAATAGTTAGTTTTATTTTGACAATTTTGTTTCATTTTTTAAATTATAATAACAGGCATATAA CATATTGTATATTGTACCATATCAATCATATTTTATAATAACTTTAGTGGAAGGATTGTTGTCAGGATCGAATTGTAAAT TTTTTAACTTCTGAGGTTTTAATAAAAAATAATTAAACGCTAAGGATTTAATTAAAAATTGGATGAAACTAAAAGGACTA AGAGATTAAGTTAACCTATTAAAAACTACATATTTGTTGTGACATGCACACGGAGGTCCGAGTCTTGTAGTATATTGTTA AAGTCTTTATTCAGATAGAGTTACCCCACATTTTCCTTTATCTTCCATATACTGATAAGCATGGCTGTTCCACACTCAAA TTGATTGCCCATTAACATCTTTTCAGCTCAAAGATCTGGCTGAGAGGCTTCCTCCTGGAGTTTATGATGCTGAGAACATT AGACCACCTTACCAGCCAAATGGCATCCACTATCCAGACTCAAATGGGGAGCAGCACTCCAAGGCAGAATTAATCAGCAG CCCTAGTTCGGCTTCCATAGGACTTGGATCCTCGCTGTCGAATGGAAATTTGGGGAATTTTGCAGGAGCCAATGGAACCA ATAGTCACGAGCAAATCCGTACCCTCGTGACCTCTAATGGGACCAATAATTATCCAGGTGTGAAATTTCCAAATGGTGGT GCTGATTTTCAGGCAAGCAGCAATATCATATCAGGCACTGTTGATGGAAGGGATTCTGGGAATTTCCAAGATGATGAGAG TGGTCTGAAATCAAAGAATGCTGTGCTGGCTGCTAATAGTAATCATATTGAGGCAGAGTGGATTGAACAGTATGAACCTG GTGTCTATATAACCCTTGTGGCCCTGCGTGATGGAACTAGAGATCTGAAGCGAGTACGATTCAGGTAATAAAAATCTTCA GCATAATCAGGTTATCCATACCTGGTTCTACTTGAGTATTTGGCTTTGGGTGTCCAGCTGTAGCCTGTAGATGATTTCAC TAATATTTGATCAGTGATAGGCCAATAGATTGGCCTGCAGTCGGCCTAGGCCAAGCTAGCTGGTCTTATTTACTAAATAA ATTAATTCAAAACTTTTTAATAGTTCATTTAGCCAAAAAATCAGGTTTAGGTTATCCGAAAAACCTTTTAGATTTGACAG GACTGCCTATTTAAGCATATATAA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0134600.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCAGGCACTAATTGCCTTGAAAAAGGGTGCTCAACTGCTTAAATATGGTCGTAAGGGAAAGCCCAAGTTTTGCCCATT TAGACTTTCCAATGATGGATCAACTTTAATCTGGATTTCAAGTAGTGGAGAAAGAAATCTGAAGCTATCTTCTGTCTCAA GAATTATTCCTGGACAAAGAACTGCTGTTTTCAAACGTTACTTGCGTCCTGAAAAGGAGTATTTGTCCTTTTCACTTATT TATGATAGCGGAAAGCGATCCCTTGACCTGATTTGCAAAGATAAAGTTGAGGCAGAAGCGTGGATTTCTGGTCTCAAATC ACTGATCTCTTCTGGCCAAGGTGGTCGGTCCAAAATTGATGGATGGAGTGATGAGGGCCTCAATCTTGATGATAGCAGAG ATTTAACATCAAATAGTCCAAGCGACAGTTCAGCTAGTGCGTCACGAGACATTAGTTCTCCTGACGTTCCTGCGAGTCTT CCAAATACCTCACCAAAGTCCTTTTGGCCTGACAATATTGTAAATTCTGAAAGGTCACATGCACCATCAGACTCAACAAA TATGCAAGTAAAAGGATCTGGTCCAGATGCTTTTCGTGTCAGTGTTTCAAGTGCCCCCAGCACGTCTAGTCATGGATCTG CACCAGATGACTATGATGCTCTGGGGGATGTATATATATGGGGGGATATTATCTGTGAAAACGTGCAAGTTAGTGCCGAT AAAAGTGTCAGTTATTTCAGTCCAAGGGCAGATGCGCTTATCCCCAAACCCCTAGAGTCCAATGTAGTTTTAGATGTACA TCATATAGCATGTGGAGTTAGACATGCTTCTTTAGTCACTAGGCAAGGTGAGGTTTTTACGTGGGGTGAAGAATCAGGAG GACGCCTTGGCCATGGTGTTGGGAAAAATGTGGTTCAACCTCGTCTAGTTGAAGCATTGACTTCTACAACTGTTGATTTT GTTGCCTGTGGGGAGTTCCATTCCTGTGCTGTTACAGTGGCCGGTGAACTATATACATGGGGTGATGGTACTCATCATGC TGGGCTGCTTGGTCATGGAACTGATGTTAGTCATTGGATACCAAAGAGAATTGCCGGTCCATTAGAGGGACTTCAAATTG CATCTGTTGCCTGTGGTCCGTGGCACACTGCCTTGATAACTTTAAGTGGGCAGCTCTTTACATTTGGTGATGGAACTTTT GGTGTCTTGGGTCATGGTGATAGGGGAAACATTTCATGTCCTAGAGAAGTGGAATCCTTATCAGGGCTGAGGACAATAGC TGTTGCATGTGGAGTGTGGCACACTGCAGCCGTGGTAGAGGTTATTGCAACGCAAACTAGTGCGAGTTTATCATCAGGTA AATTGTTTACTTGGGGTGATGGAGACAAAAATCGCCTTGGGCATGGGGATAAGGAGGCACGACTTAAACCAACTTGTGTG CCTGCACTTATTGAGTACAATTTTCATAAAATTGCTTGTGGACACAGTTTGACAGTAGGCCTGACAATATCTGGACGTGT TTTTACCATGGGAAGTACTGTATATGGTCAGCTTGGGAATCCCAAGTCTGATGGAAAGCTGCCCTGCTTGGTTGGAGACA AGATTGCTGGGGAGTCCGCTGAAGAAATCGCATGTGGTGCATATCACGTGGCTGTTTTAACATCCAAAAATGAAGTTTAC ACTTGGGGTAAGGGTGCAAATGGGAGATTGGGTCATGGAGATCTTGAAGATCGAAAAACACCAACTCTGGTTGAAGCATT GAAGGACCGACATGTGAAATATATTGCATGTGGTTCAAACTACTCGGCTGCCATATGCCTTCATAAGTGGGTATCTGGTG CTGAGCAGTCTCAATGCTCTGCCTGTAGACAGGCATTTGGCTTCACTAGAAAGAGGCACAATTGTTACAACTGTGGACTT GTGCACTGCCATTCATGCAGTTCAAGGAAAGCATTAAGAGCAGCACTAGCTCCTAATCCTGGCAAGCCATATCGTGTTTG TGAATCTTGTTATGTAAAATTGAACAAGGTTGCAGAAACTAACCATAATAATCGGAGGAGTGCTTTGCCACGTCTGTCGG GTGAAAACAAGGATAGGTTAGACAAGTCTGAGCTAAGATTGTCCAAGTCAGTAATTCCTTCTAACATGGATTTGATAAAG CAGCTAGATAGTAAGGCAGCCAAACAAGGAAAGAAGGCTGATACATTCTCACTAGTTCGCTCCTCGCAAGGACCTTCCTT GCTACAGCTGAAAGATGTTGTATTCTCGACTGCTGTTGATCTGAAACGAACTGTTCCAAGACCGGTGGTTGCACCATCTG GAGTAAGTTCAAGGTCTGTGTCCCCTTTCTCTCAGAGACCAAGCCCTCCTCGTTCTGCTACACCTATTCCAACAACATCA GGGCTTTCCTTCTCCAAAAATATTGCTGATAGGTTAAAGAAAACAAATGAAATTTTAAATCAGGAAGTGCAGATGTTACG TGCTCAGGTTGAGAGCCTGAGGAAGAGATCTGAACTACAAGAGTTAGAGCTTCAAAGGTCAACAAAAAAGACACAAGAAG CTTTGGCACTGGCTTCTGAGGAATCTGCTAAATCTAAAGCTGCAAAAGAAGTTATAAAGTCACTTACGGCACAGCTCAAA GATCTGGCTGAGAGGCTTCCTCCTGGAGTTTATGATGCTGAGAACATTAGACCACCTTACCAGCCAAATGGCATCCACTA TCCAGACTCAAATGGGGAGCAGCACTCCAAGGCAGAATTAATCAGCAGCCCTAGTTCGGCTTCCATAGGACTTGGATCCT CGCTGTCGAATGGAAATTTGGGGAATTTTGCAGGAGCCAATGGAACCAATAGTCACGAGCAAATCCGTACCCTCGTGACC TCTAATGGGACCAATAATTATCCAGGTGTGAAATTTCCAAATGGTGGTGCTGATTTTCAGGCAAGCAGCAATATCATATC AGGCACTGTTGATGGAAGGGATTCTGGGAATTTCCAAGATGATGAGAGTGGTCTGAAATCAAAGAATGCTGTGCTGGCTG CTAATAGTAATCATATTGAGGCAGAGTGGATTGAACAGTATGAACCTGGTGTCTATATAACCCTTGTGGCCCTGCGTGAT GGAACTAGAGATCTGAAGCGAGTACGATTCAGTGATAGGCCAATAGATTGGCCTGCAGTCGGCCTAGGCCAAGCTAGCTG GTCTTATTTACTAAATAAATTAATTCAAAACTTTTTAATAGTTCATTTAGCCAAAAAATCAGGTTTAGGTTATCCGAAAA ACCTTTTAGATTTGACAGGACTGCCTATTTAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0134600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MQALIALKKGAQLLKYGRKGKPKFCPFRLSNDGSTLIWISSSGERNLKLSSVSRIIPGQRTAVFKRYLRPEKEYLSFSLI YDSGKRSLDLICKDKVEAEAWISGLKSLISSGQGGRSKIDGWSDEGLNLDDSRDLTSNSPSDSSASASRDISSPDVPASL PNTSPKSFWPDNIVNSERSHAPSDSTNMQVKGSGPDAFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGDIICENVQVSAD KSVSYFSPRADALIPKPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALTSTTVDF VACGEFHSCAVTVAGELYTWGDGTHHAGLLGHGTDVSHWIPKRIAGPLEGLQIASVACGPWHTALITLSGQLFTFGDGTF GVLGHGDRGNISCPREVESLSGLRTIAVACGVWHTAAVVEVIATQTSASLSSGKLFTWGDGDKNRLGHGDKEARLKPTCV PALIEYNFHKIACGHSLTVGLTISGRVFTMGSTVYGQLGNPKSDGKLPCLVGDKIAGESAEEIACGAYHVAVLTSKNEVY TWGKGANGRLGHGDLEDRKTPTLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSACRQAFGFTRKRHNCYNCGL VHCHSCSSRKALRAALAPNPGKPYRVCESCYVKLNKVAETNHNNRRSALPRLSGENKDRLDKSELRLSKSVIPSNMDLIK QLDSKAAKQGKKADTFSLVRSSQGPSLLQLKDVVFSTAVDLKRTVPRPVVAPSGVSSRSVSPFSQRPSPPRSATPIPTTS GLSFSKNIADRLKKTNEILNQEVQMLRAQVESLRKRSELQELELQRSTKKTQEALALASEESAKSKAAKEVIKSLTAQLK DLAERLPPGVYDAENIRPPYQPNGIHYPDSNGEQHSKAELISSPSSASIGLGSSLSNGNLGNFAGANGTNSHEQIRTLVT SNGTNNYPGVKFPNGGADFQASSNIISGTVDGRDSGNFQDDESGLKSKNAVLAANSNHIEAEWIEQYEPGVYITLVALRD GTRDLKRVRFSDRPIDWPAVGLGQASWSYLLNKLIQNFLIVHLAKKSGLGYPKNLLDLTGLPI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:2.30.29.30
1 118 118 1.7E-21
IPR011993
PANTHER
PTHR22870:SF91
2 1054 1053 0.0 –
PANTHER
PTHR22870
2 1054 1053 0.0 –
SUPERFAMILY
SSF50729
2 109 108 1.41E-25 –
CDD
cd13365
2 110 109 1.33431E-47 –
Pfam
PF16457
4 109 106 1.1E-6
IPR001849
MobiDBLite
mobidb-lite
130 215 86 - –
MobiDBLite
mobidb-lite
132 192 61 - –
Gene3D
G3DSA:2.130.10.30
180 443 264 9.8E-54
IPR009091
MobiDBLite
mobidb-lite
200 214 15 - –
SUPERFAMILY
SSF50985
221 610 390 3.07E-96
IPR009091
Pfam
PF00415
283 331 49 3.2E-9
IPR000408
ProSiteProfiles
PS50012
283 334 52 14.243
IPR000408
PRINTS
PR00633
285 301 17 1.1E-13
IPR000408
Pfam
PF00415
335 386 52 1.5E-9
IPR000408
ProSiteProfiles
PS50012
335 389 55 14.484
IPR000408
PRINTS
PR00633
335 351 17 1.1E-13
IPR000408
PRINTS
PR00633
376 392 17 1.1E-13
IPR000408
ProSitePatterns
PS00626
376 386 11 -
IPR000408
Pfam
PF00415
389 438 50 4.9E-12
IPR000408
ProSiteProfiles
PS50012
390 441 52 12.896
IPR000408
PRINTS
PR00633
392 406 15 1.1E-13
IPR000408
ProSitePatterns
PS00626
428 438 11 -
IPR000408
Gene3D
G3DSA:2.130.10.30
444 613 170 1.2E-45
IPR009091
Pfam
PF00415
452 499 48 2.7E-11
IPR000408
ProSiteProfiles
PS50012
453 504 52 13.72
IPR000408
PRINTS
PR00633
494 512 19 1.1E-13
IPR000408
Pfam
PF00415
504 553 50 6.3E-6
IPR000408
ProSiteProfiles
PS50012
505 556 52 12.373
IPR000408
PRINTS
PR00633
552 573 22 1.1E-13
IPR000408
ProSiteProfiles
PS50012
557 608 52 14.886
IPR000408
Pfam
PF00415
558 605 48 4.7E-14
IPR000408
SMART
SM00064
607 676 70 1.7E-19
IPR000306
Pfam
PF01363
609 675 67 6.7E-13
IPR000306
SUPERFAMILY
SSF57903
609 681 73 1.77E-17
IPR011011
ProSiteProfiles
PS50178
613 675 63 11.548
IPR017455
Gene3D
G3DSA:3.30.40.10
614 676 63 9.8E-16
IPR013083
CDD
cd00065
618 671 54 4.58577E-16 –
MobiDBLite
mobidb-lite
769 802 34 - –
Coils
Coil
809 850 42 - –
Pfam
PF13713
860 895 36 6.4E-19
IPR027988
Coils
Coil
865 885 21 - –
MobiDBLite
mobidb-lite
890 921 32 - –
MobiDBLite
mobidb-lite
907 921 15 - –
Pfam
PF08381
1020 1053 34 1.0E-13
IPR013591
ProSiteProfiles
PS51514
1021 1079 59 18.911
IPR013591

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046872
Molecular function Metal ion binding Interacting selectively and non-covalently with any metal ion.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0134600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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