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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0049200 |
| Transcript ID | LotjaGi1g1v0049200.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr|G7K368|G7K368_MEDTR Regulator of chromosome condensation (RCC1) family protein; Found in the gene: LotjaGi1g1v0049200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:6826247..6833926) extracted from Lotus japonicus Gifu genome v1.2.
ATCTATGATCATACTAAGTTTACCTACCCCATAGTCACATACTCACATACCATGTATTTGACCAAGTGACGTCCTACGTA TGGAAGAGTTTTATGTACTTGGTAAATATGTTTTGAACTTCAGCAGGATCTCTTGTTACTTATCAACCAAGTGTTATATA TGTGCTATGCTTGTCCTGTAATTCCTCAATCTTATAAGTCTTACCATGACTGAACTCCTTTATTGATCTTAAATGACAGG CAATTACTGCTTTAAAGAAAGGGGCTTGCTTGCTCAAGTATGGAAGAAGGGGGAAGCCAAAGTTTTGCCCCTTTCGGCTA TCCAATGTGAGTTTTTAACTTCTCTTGGGTAGATTTAAGTTTATCCACGTTAAAGTGTGTCTCAATTTTGTTTTCCTGAA GATTTGTATTCGGCATTAAAAACTTTCAGAACCAAGCTTAGACTCAGTCTTTCTACTCTTTATTTTGTATGTTCTATAAA TAATTGTGGAAGTATTTCTTCTAAATGCAGTAGGGGGAAGATAGAAGGGGTCCTTTAAGCTGAAAGACAGGGTGAACTAT TTGTGGAAGAGAGGAGCTGAAATGAAAAATATTCAGCTGATAAGTTAAACAGTGAAAAACATGATATTCCAAAACTGTAT GCTCTAAAATTAGAAATACAATGCTACAGAAAAATCTATCAATCAATGGCTTAACAGCAATTAGGTTACCTTGAGATTAG GTTTCCAAAAGCGTTTGCAGTAACTTCATTATGAAAATTTGATAAGATCACAGTGATTATGGTATTGTGCCTAACTGCTA AATGAGTTTCCGGCAACAATTTGAAGACTTGATTTTGTTTTTACCAAACCGGGTAGAGTGGGCAGCCTTGACTAGTCTAA CTGATGAGACTGATTTGATCTGCAAGAACCCTTCGTGCCAATATTTATAAACGGAAAGCTATCTTTCAACACAAGAAGCT AAATCTTATAATGGCAAGCACTCAAATCCTCATAACTAGAATGTAAATTTGAATCTAAGCTTACATGTTACCTTATTAAG CCCCACATCGTGTCAAACACTGCTGTATTTGGTGGTTATGCTTGCATTAATAGAATCTTCTGCATGACATTTCATGGCTT GAAAGCCATATGATTATTTTGCTACTGCCATAACATTGCTTATCGTTTATTTTATAAATTTTCCATAAATTATTTGTTTC TATTACATAAAGGATTGTTTTTAGATATTTTCCTGTTGCAAAGAATTTGAAGTATTTGATATTGCTATTTTTTCAGGATG AATCTGTTTTGATATGGTTCTCTGGGAAAGAAGAGAAGCACCTTAAACTGAGTCATGTCTCTAGAATTATATCTGGACAA CGCACGGTAGATTTTTAAATTGATTGTGAAATCATTATACTGTTAACCTTTTCAGATTTAGCCAACAGTGTGAGCCTTGT CAGCCTGGTTTCGATACGTAGTTGTTAAGTTCTATTTGATGTTTGTATGATTAACACAAATTGTGTTACTTCTCTGGTAT GCAATCTTATGATCTCCATTTGCTCGAAGTCAAGATATATGAATGATATCTTTTATTACCACCTACTAGTAAATAGTAAT TGGCTTTATTTTTTACTTTATGTTGTATTATGAATATTTACTTGCTTGTTTATGGCAGCTATTGGGTTTTTGTTTTGCTT TAAGGAACATGCTGATGATTTTGTATTGTTTCAGTGTCCTATTCTAATAAGTTAATATTTATGTAAAAAGACCTTACTCA TACATGAACTCAAGATTTTCTATTGAGCATGTGCATGAGTGTGTTTAATAATTTTAAATATATTGGTAGTTCCTTCTTGA CTTTGGGCATCATCTGTTAATACATATCAAGTGATAAGGTGAGTATGATTAATAAAACATGGTCCCTATTCTTTTCAGCC TATCTTTCAAAGATATCCGCGGCCTGAGAAGGAATACCAGTCGTTTTCTCTTATCTACAGTGATAGGTCACTGGACTTGG TATGGATTTCTTCATTTCTCTCTATTTTGGGATTTTTGGCTGTAGTTGGCCTATTGGTTTGCTTGTACTATGTTCTTGGT ATTGTGAACAGTGTATTTTGTCTGTAAAAGCTTTACACAATCTAGTGATCTGATTCTCTTCTACTAGATATGCAAGGATA AAGATGAAGCTGAGGTTTGGTTCAGTGGTTTGAAAGCATTAATTTCACGAAGCCATCATAGAAAATGGAGAACAGACTCA AGAAGTGACGGTATTCCATCTGAGGCTAATAGTCCTCGAACATACACAAGAAGAAGTTCTCCCTTAAATTCTCCATTTGG AAGTAATGAGAGCTTGCAAAAGGTAATACATATTATCCATGTCTTTCATATTTTCTTCCAATTTACTCCATTGCGGTTGA ATATGTTTATTTAGAGAATTTTCGTTTGTCCTTTTCAGGATAGTGGGGATCACCTTCGCCTCCATAGCCCATATGAGAGC CCCCCTAAAAATGGTTTGGACAAAGCATTAGATGTGGTCTTGTATGCTGTTCCTCAAAAGGGTTTCTTCCCTCCTGATTC AGCCAGTGCTTCAGTCCACTCTATATCATCCGGAGGATCAGATAGTATGCATGGTCACATGAGGACGGTGGGTATGGATG CTTTCAGGGTTAGTCTGTCAAGTGCTGTTAGCTCATCTAGCCAAGGTTCTGGTCATGATGATGGTGATGCTTTAGGGGAT GTTTTCATTTGGGGGGAAGGCACAGGTGATGGTGTTCTGGGTGGTGGGAATCATCGAGTTGGGAGTTCTTTGGGTGTAAA AATTGATTCTCTATTTCCTAAAGCCTTGGAATCTGCAGTAGTTCTTGATGTACAGAATATTGCTTGTGGCGGACGACATG CGGCCTTAGTGACCAAACAAGGTGAAATTTTCTCCTGGGGTGAGGAATCAGGAGGCAGGCTTGGGCATGGTGTTGACTCT GATGTTCTCCAACCAAAGCTTATAGAAGCTCTAAGTAATACAAATATTGAACTTGTGGCTTGTGGGGAGTACCATACTTG TGCTGTGACCCTTTCTGGTGATCTTTATACATGGGGTAATGGCACATACAATTATGGTCTTCTGGGACATGGAAATCAAG TCAGCCACTGGGTCCCAAAAAGAGTAAATGGCCCCTTGGAAGGCATACATGTTTCATATATTTCATGTGGACCATGGCAC ACTGCTGTTGTAACATCTTCTGGGCAATTATTTACTTTTGGTGATGGTACATTTGGTGCTTTGGGTCATGGTGACCGAAA AAGTGTTTCAATACCAAGGGAAGTAGAGTCCCTCAAGGGTCTTCGTACTATGCGGGCTGCTTGTGGTGTTTGGCATACTG CTGCAGTTGTGGAAGTCATGGTTGGAAGTTCGAGTTCCAGCAACTGCTCTTCAGGGAAGCTGTTTACTTGGGGGGATGGA GACAAAGGTCGACTTGGGCATGGTGATAAGGAAGCAAAACTTGTTCCAACCTGTGTTGCTCTCGTTGAACACAACTTTTG TCGAGTTGCTTGTGGACATAGTCTGACTGTTGTACTTACCACCTCAGGCCATGTCTATACCATGGGAAGTCCTGTCTATG GTCAGTTAGGAAATCCACAAGCTGATGGGAAGCTACCAACCCGCGTTGAAGGGAAATTGTCAAAGAGTTTTGTGGAGGAG ATAGCTTGTGGTGCTTATCATGTTGCGGTTTTAACTTTAAGGAACGAAGTCTACACTTGGGGTAAAGGTGCAAATGGCCG TTTAGGCCATGGAGATACAGATGATAGAAATGCCCCAACATTAGTGGAAGCTCTTAAAGAAAAACATGTCAAAAGTATCG CCTGCGGAACTAATATCACTGCAGCTATCTGTCTGCATAAGTGGGTTTCTGGTGTTGACCAGTCTATGTGTTCTGGTTGT CGTATGCCGTTTAATTTCAAAAGGAAACGCCACAATTGTTATAACTGTGGCCTTGTTTTTTGTCATTCATGTAGCAGTAA GAAGTCTCATAAGGCTTCAATGGCGCCAAACCCCAATAAACCTTATCGTGTCTGTGATAGTTGTTTTAATAAACTTAGGA AAACTGTAGAAACTGATTCTTCATCTCACTCTTCTATTAGCAGAAGAGGAAGTATAAATCAAGGGTCTGAAATGGTTGAT AAGGATGATAAATTTGATTCCAGATCTCGTAATCAACTTGCCAGGTTTTCTTCAATGGAATCATTCAAACAAGTGGAAAG CAGATCTTCAAAGAAAAACAAGAAATTGGAATTCAACAGTAGCCGTGTCTCGCCTGTTCCAAATGGGGGTTCACAATGGG GAGCACTGAATATTTCTAAATCTTTAAATCCTGTTTTTGGATCATCAAAGAAATTTTTCTCGGCTTCTGTTCCTGGATCT AGAATTGTTTCCCGGGCAACATCTCCAATATCTAGACGGCCTAGTCCGCCACGTTCAACTACTCCAACCCCAACACTGGG AGGTCTTACATCCCCGAAAATAGTTGTGGATGATGCTAAGAGGACTAATGATAGCCTCAGTCAGGAGGTTATTAAATTAA GACAGCAGGTATCTTTTTTATGCATTCACTTACAATATTCCCTTTCTTGTTATAAAGTTCAAATAGAATTTTAACAAAAA AGGACTTATAGTTTGCACCCGATTTTATTCAACCAATTCTTTTCTTATGACATTAGTTTCTATGAATTTGTCTGATGAAA TGGCATAGACAACATGTGGAAACAAAAGCAAGGATCTTGGATGTTGTTAGCAAGATGCCTCCTCATTGAGCTGACTTGTT TACTTTCTGCATTGTCTGAAAATACCTAATAGATGAATCACAATTTAAATTCCAACTACCACTTAAATGCACTTGCTAGA AATGTAGTATCTCCATGTAATTAAATATATATACTACAATGCAAAATGTTTAGCAACATCATTGTTGAATGTCACAGTTC TATGATTTAACCTTTTATTTAATAATTACAAAGAAAAAAAATTAACAGTGGGTTGATTTTGATTCTTACAGAGCACTTCT TTTTTTAAGGGTTTCAAATAATCAATTATAGAGCTTATTCTCATCACCCATCAACAATTTTTTTTTCTCATAAATAGTTG ACTGTTCGATATAGTGGATGCCTGATATCATTAATTTACTTTCATAGGTGGGAAATAATTTGTAGACATGCAACAAGGAT GTTTAACTCACATGGTTGTCTATTTGTTGTGAGCGTTAAACATTGAAATTGTTTCCCCCCTTTTAGGTGGAAAGCCTGAC TCGGAAAGCCCAACTTCAAGAAGTCGAGTTGGAAAGAACAACTAAACAGCTAAAAGATGCAATAGCAATTGCCGGGGAAG AAACTGCCAAATGTAAAGCAGCAAAGGAAGTAATCAAGTCTCTGACTGCCCAGGTAGAAACTTTAATCCCTTGGAACACT TTAACAAATTAGACTACTATATATTTGACACAAATCAGCTGTCATGTCCTATAATAACTTATCTTAGAAAAAACAATATG CATTGAAGATGCACTGAGCTAACACTCATCTACCCTAAATATAAATTGTAAAGTCATAAGATGTTAAAGTCAGACCCAAT ATCAATTTTAAGCCAAACCAAAGTAACGAAATTTTTAATGGCTTAATACATCAGAAGGCCCCTGAAATTGTAAAGGAAAT CAGTTTCAGGGCCTGAAAAATTTTCGCATCAAATTGGGTCCTTAAGAAATTTTTTTTAATTCAATTAAGGCCAAATCTCA ATTTTGTCCTAGTCATCAATTACACGTGACTTTTATAATTTTTTTAAATTAAAAAAAACTAAAAATTATTTTTAAAAAAA AATTAAATTTGGCCTTAAAAAAAATTAAAAATATTTGCCCTAAAAGAAAATTTAAAAATTTGGCTTTTAATTCAATTAAA ATTTTATTTGGCCTTAAAAAAAATAATTTTTTTTAATGAGTTGGAATTAAAAATAATTTTTATTTTATTTTTAATTAAAA AAAATTATAAAAGCCACGTGGAATTGATGACTGGGATAAAATTGAAGGCTGGCACACTTTGGCCTTAATTGAATTAAAAA AAATATTTCTAGGGACCCAATTTGATGCAAAAAAATTTCAGGCCCTGGATTTGATTCCCTTTACAATTACAGGGGTCTTC TGATGTATTAAGCCTATTTAAGCTCTTATCTTCTAACAATTTTTTGTGTGTCGATTTTTCATGTATCATAACTAACTAAT CCAACATTTTTTTTGTTTCTTCCGCTTAATAGTTGAAGGACATGGCTGAGCGGCTACCTGTAGGAGCAATTAGAAATGTC AAATCACCTTCTCTAGCTTCTTTTGGTTCCAATCCTTCTTCCAATGAAATTGGCTATGCTTCCATTGATCGATTAAATAT TCAAGCAACAAGCCCAGAAGCAGACTTAGCTGGATCAAATAACCAGTCACTTTCAAATGGATCAAGCACGGTCAGTAATC GCAATGCAGGTCACACTAAACAGAGCCAGTCAGATTCTAATAATAGAAATGGGAGCAGAACAAAGGATAGTGAATCTCGT AATGAGAGTGAATGGGTTGAGCAAGATGAACCTGGTGTATATATTACCCTCACCTCCCTACCAGGAGGTGTAAAAGATCT TAAGAGAGTTCGATTCAGGTATGGAATGCTCTTTAGACATTGATTTTCTGTCAGCACACAGAACTTCTGTGAAATTTGGT CATGTAGAATATGATATGCTTTTATTGAAAAAGGAAAAAGTAGAACTTGGGATTCATGGTGTTAGGACTATGACAATAAC TATTCCTAGGTCAAATGACAAACTAATGGCAATTTAGTCTCTTTTAGGGCCTGAAATATTTTGATGCAGTTGAGTGCTTT ACTTCAATGGATGAGTGAGTTATAGTGTTCTACTTGCTTGTGTACCTTTTAGCTGTCGAGCAACTTTGCTTTCCGTTGTG TTTGAGGAGCCAGAATTATGATTGCTTCCCAGCTTGGCAAAAGTTTATTTTTGCCATGCTAACATGATTTTGATCCTTCA CTGGCTCAGCAATTACTAACGGGAGTAACATTGAGAATAGAAATGGATTGTGTTCTATTATTGCCAAGAACATTCCTGAC TGGTCTATTTGTCATGTTTCATGTCTTGATCAGCTGCAGATTTACTTTATCTTGAAACTATATAGTAATCTCCCACCATA ATGTTTCATTCTATAATTTGGTATCTGCTGGGACAAATTAGAAAACTACATAGTATTCTATGATCGGACAAAATTTGACG CAGCTTCATACATGTTTTTACTAATGTCCAATTATAACATGACACATGGGTTAGAAAATGGGAAGTTGAGGGACGTTATC ACATTAATAAAATATGAAGAAAGTAGATGATTGAACTTTTAATTAGGAAACAACATGAACAATATATATATATATATAGT GCAGTATATATAGATAGATAGATAGATAGATAGTACAATATCTAAGTTTTGTCCTTTATGATTATCCATTTTTTAATGAG TTTTGACTATAATGTTGGTGAATGCAGTCGAAAGCGGTTCAGTGAGAAACAAGCAGAGCAATGGTGGGCTGAGAACCGGG CAAGAGTATATGAACAGTACAATGTACGAATGATTGACAAGTCCAGTGTTGGTGTTGGGAGTGATGACCTGGCTCATTGA
CDS sequence (LotjaGi1g1v0049200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGCTATGCTTGTCCTGCAATTACTGCTTTAAAGAAAGGGGCTTGCTTGCTCAAGTATGGAAGAAGGGGGAAGCCAAA GTTTTGCCCCTTTCGGCTATCCAATGATGAATCTGTTTTGATATGGTTCTCTGGGAAAGAAGAGAAGCACCTTAAACTGA GTCATGTCTCTAGAATTATATCTGGACAACGCACGCCTATCTTTCAAAGATATCCGCGGCCTGAGAAGGAATACCAGTCG TTTTCTCTTATCTACAGTGATAGGTCACTGGACTTGATATGCAAGGATAAAGATGAAGCTGAGGTTTGGTTCAGTGGTTT GAAAGCATTAATTTCACGAAGCCATCATAGAAAATGGAGAACAGACTCAAGAAGTGACGGTATTCCATCTGAGGCTAATA GTCCTCGAACATACACAAGAAGAAGTTCTCCCTTAAATTCTCCATTTGGAAGTAATGAGAGCTTGCAAAAGGATAGTGGG GATCACCTTCGCCTCCATAGCCCATATGAGAGCCCCCCTAAAAATGGTTTGGACAAAGCATTAGATGTGGTCTTGTATGC TGTTCCTCAAAAGGGTTTCTTCCCTCCTGATTCAGCCAGTGCTTCAGTCCACTCTATATCATCCGGAGGATCAGATAGTA TGCATGGTCACATGAGGACGGTGGGTATGGATGCTTTCAGGGTTAGTCTGTCAAGTGCTGTTAGCTCATCTAGCCAAGGT TCTGGTCATGATGATGGTGATGCTTTAGGGGATGTTTTCATTTGGGGGGAAGGCACAGGTGATGGTGTTCTGGGTGGTGG GAATCATCGAGTTGGGAGTTCTTTGGGTGTAAAAATTGATTCTCTATTTCCTAAAGCCTTGGAATCTGCAGTAGTTCTTG ATGTACAGAATATTGCTTGTGGCGGACGACATGCGGCCTTAGTGACCAAACAAGGTGAAATTTTCTCCTGGGGTGAGGAA TCAGGAGGCAGGCTTGGGCATGGTGTTGACTCTGATGTTCTCCAACCAAAGCTTATAGAAGCTCTAAGTAATACAAATAT TGAACTTGTGGCTTGTGGGGAGTACCATACTTGTGCTGTGACCCTTTCTGGTGATCTTTATACATGGGGTAATGGCACAT ACAATTATGGTCTTCTGGGACATGGAAATCAAGTCAGCCACTGGGTCCCAAAAAGAGTAAATGGCCCCTTGGAAGGCATA CATGTTTCATATATTTCATGTGGACCATGGCACACTGCTGTTGTAACATCTTCTGGGCAATTATTTACTTTTGGTGATGG TACATTTGGTGCTTTGGGTCATGGTGACCGAAAAAGTGTTTCAATACCAAGGGAAGTAGAGTCCCTCAAGGGTCTTCGTA CTATGCGGGCTGCTTGTGGTGTTTGGCATACTGCTGCAGTTGTGGAAGTCATGGTTGGAAGTTCGAGTTCCAGCAACTGC TCTTCAGGGAAGCTGTTTACTTGGGGGGATGGAGACAAAGGTCGACTTGGGCATGGTGATAAGGAAGCAAAACTTGTTCC AACCTGTGTTGCTCTCGTTGAACACAACTTTTGTCGAGTTGCTTGTGGACATAGTCTGACTGTTGTACTTACCACCTCAG GCCATGTCTATACCATGGGAAGTCCTGTCTATGGTCAGTTAGGAAATCCACAAGCTGATGGGAAGCTACCAACCCGCGTT GAAGGGAAATTGTCAAAGAGTTTTGTGGAGGAGATAGCTTGTGGTGCTTATCATGTTGCGGTTTTAACTTTAAGGAACGA AGTCTACACTTGGGGTAAAGGTGCAAATGGCCGTTTAGGCCATGGAGATACAGATGATAGAAATGCCCCAACATTAGTGG AAGCTCTTAAAGAAAAACATGTCAAAAGTATCGCCTGCGGAACTAATATCACTGCAGCTATCTGTCTGCATAAGTGGGTT TCTGGTGTTGACCAGTCTATGTGTTCTGGTTGTCGTATGCCGTTTAATTTCAAAAGGAAACGCCACAATTGTTATAACTG TGGCCTTGTTTTTTGTCATTCATGTAGCAGTAAGAAGTCTCATAAGGCTTCAATGGCGCCAAACCCCAATAAACCTTATC GTGTCTGTGATAGTTGTTTTAATAAACTTAGGAAAACTGTAGAAACTGATTCTTCATCTCACTCTTCTATTAGCAGAAGA GGAAGTATAAATCAAGGGTCTGAAATGGTTGATAAGGATGATAAATTTGATTCCAGATCTCGTAATCAACTTGCCAGGTT TTCTTCAATGGAATCATTCAAACAAGTGGAAAGCAGATCTTCAAAGAAAAACAAGAAATTGGAATTCAACAGTAGCCGTG TCTCGCCTGTTCCAAATGGGGGTTCACAATGGGGAGCACTGAATATTTCTAAATCTTTAAATCCTGTTTTTGGATCATCA AAGAAATTTTTCTCGGCTTCTGTTCCTGGATCTAGAATTGTTTCCCGGGCAACATCTCCAATATCTAGACGGCCTAGTCC GCCACGTTCAACTACTCCAACCCCAACACTGGGAGGTCTTACATCCCCGAAAATAGTTGTGGATGATGCTAAGAGGACTA ATGATAGCCTCAGTCAGGAGGTTATTAAATTAAGACAGCAGGTGGAAAGCCTGACTCGGAAAGCCCAACTTCAAGAAGTC GAGTTGGAAAGAACAACTAAACAGCTAAAAGATGCAATAGCAATTGCCGGGGAAGAAACTGCCAAATGTAAAGCAGCAAA GGAAGTAATCAAGTCTCTGACTGCCCAGTTGAAGGACATGGCTGAGCGGCTACCTGTAGGAGCAATTAGAAATGTCAAAT CACCTTCTCTAGCTTCTTTTGGTTCCAATCCTTCTTCCAATGAAATTGGCTATGCTTCCATTGATCGATTAAATATTCAA GCAACAAGCCCAGAAGCAGACTTAGCTGGATCAAATAACCAGTCACTTTCAAATGGATCAAGCACGGTCAGTAATCGCAA TGCAGGTCACACTAAACAGAGCCAGTCAGATTCTAATAATAGAAATGGGAGCAGAACAAAGGATAGTGAATCTCGTAATG AGAGTGAATGGGTTGAGCAAGATGAACCTGGTGTATATATTACCCTCACCTCCCTACCAGGAGGTGTAAAAGATCTTAAG AGAGTTCGATTCAGTCGAAAGCGGTTCAGTGAGAAACAAGCAGAGCAATGGTGGGCTGAGAACCGGGCAAGAGTATATGA ACAGTACAATGTACGAATGATTGACAAGTCCAGTGTTGGTGTTGGGAGTGATGACCTGGCTCATTGA
Protein sequence (LotjaGi1g1v0049200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCYACPAITALKKGACLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQS FSLIYSDRSLDLICKDKDEAEVWFSGLKALISRSHHRKWRTDSRSDGIPSEANSPRTYTRRSSPLNSPFGSNESLQKDSG DHLRLHSPYESPPKNGLDKALDVVLYAVPQKGFFPPDSASASVHSISSGGSDSMHGHMRTVGMDAFRVSLSSAVSSSSQG SGHDDGDALGDVFIWGEGTGDGVLGGGNHRVGSSLGVKIDSLFPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEE SGGRLGHGVDSDVLQPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGI HVSYISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSIPREVESLKGLRTMRAACGVWHTAAVVEVMVGSSSSSNC SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEHNFCRVACGHSLTVVLTTSGHVYTMGSPVYGQLGNPQADGKLPTRV EGKLSKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNAPTLVEALKEKHVKSIACGTNITAAICLHKWV SGVDQSMCSGCRMPFNFKRKRHNCYNCGLVFCHSCSSKKSHKASMAPNPNKPYRVCDSCFNKLRKTVETDSSSHSSISRR GSINQGSEMVDKDDKFDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSS KKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRQQVESLTRKAQLQEV ELERTTKQLKDAIAIAGEETAKCKAAKEVIKSLTAQLKDMAERLPVGAIRNVKSPSLASFGSNPSSNEIGYASIDRLNIQ ATSPEADLAGSNNQSLSNGSSTVSNRNAGHTKQSQSDSNNRNGSRTKDSESRNESEWVEQDEPGVYITLTSLPGGVKDLK RVRFSRKRFSEKQAEQWWAENRARVYEQYNVRMIDKSSVGVGSDDLAH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 4 | 111 | 108 | 1.16E-27 | – | |
| Gene3D | 5 | 121 | 117 | 2.5E-21 | ||
| PANTHER | 6 | 1075 | 1070 | 0.0 | – | |
| PANTHER | 6 | 1075 | 1070 | 0.0 | – | |
| CDD | 7 | 112 | 106 | 5.45802E-50 | – | |
| Pfam | 9 | 111 | 103 | 1.7E-6 | ||
| MobiDBLite | 120 | 174 | 55 | - | – | |
| MobiDBLite | 126 | 156 | 31 | - | – | |
| Gene3D | 246 | 469 | 224 | 4.8E-57 | ||
| SUPERFAMILY | 249 | 639 | 391 | 7.94E-97 | ||
| ProSiteProfiles | 250 | 311 | 62 | 12.052 | ||
| PRINTS | 295 | 308 | 14 | 6.3E-17 | ||
| ProSitePatterns | 298 | 308 | 11 | - | ||
| ProSiteProfiles | 312 | 363 | 52 | 15.228 | ||
| Pfam | 312 | 360 | 49 | 4.3E-11 | ||
| PRINTS | 314 | 330 | 17 | 6.3E-17 | ||
| Pfam | 363 | 415 | 53 | 1.3E-10 | ||
| PRINTS | 364 | 380 | 17 | 6.3E-17 | ||
| ProSiteProfiles | 364 | 418 | 55 | 14.122 | ||
| PRINTS | 405 | 421 | 17 | 6.3E-17 | ||
| ProSitePatterns | 405 | 415 | 11 | - | ||
| Pfam | 418 | 467 | 50 | 8.6E-12 | ||
| ProSiteProfiles | 419 | 470 | 52 | 12.635 | ||
| PRINTS | 421 | 435 | 15 | 6.3E-17 | ||
| Gene3D | 470 | 648 | 179 | 4.9E-45 | ||
| Pfam | 482 | 530 | 49 | 2.2E-12 | ||
| ProSiteProfiles | 483 | 533 | 51 | 15.107 | ||
| PRINTS | 523 | 541 | 19 | 6.3E-17 | ||
| Pfam | 533 | 582 | 50 | 8.6E-8 | ||
| ProSiteProfiles | 534 | 585 | 52 | 13.097 | ||
| PRINTS | 581 | 602 | 22 | 6.3E-17 | ||
| ProSiteProfiles | 586 | 637 | 52 | 14.705 | ||
| Pfam | 587 | 634 | 48 | 8.2E-14 | ||
| SMART | 636 | 705 | 70 | 9.1E-19 | ||
| Pfam | 638 | 704 | 67 | 3.0E-13 | ||
| SUPERFAMILY | 638 | 709 | 72 | 3.45E-17 | ||
| ProSiteProfiles | 642 | 704 | 63 | 11.764 | ||
| CDD | 647 | 700 | 54 | 5.94678E-17 | – | |
| Gene3D | 649 | 705 | 57 | 5.7E-15 | ||
| MobiDBLite | 710 | 785 | 76 | - | – | |
| MobiDBLite | 710 | 725 | 16 | - | – | |
| MobiDBLite | 726 | 741 | 16 | - | – | |
| MobiDBLite | 770 | 785 | 16 | - | – | |
| MobiDBLite | 815 | 843 | 29 | - | – | |
| Coils | 847 | 888 | 42 | - | – | |
| Pfam | 898 | 931 | 34 | 1.6E-17 | ||
| Coils | 903 | 923 | 21 | - | – | |
| Pfam | 939 | 1008 | 70 | 1.4E-22 | – | |
| MobiDBLite | 966 | 1002 | 37 | - | – | |
| MobiDBLite | 966 | 1019 | 54 | - | – | |
| MobiDBLite | 1003 | 1019 | 17 | - | – | |
| Pfam | 1014 | 1069 | 56 | 2.4E-29 | ||
| ProSiteProfiles | 1015 | 1070 | 56 | 35.54 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi1g1v0049200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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