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RecA family profile 2.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | DNA metabolic process | Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides. | ||
| Molecular function | DNA-dependent ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of single- or double-stranded DNA, and it drives another reaction. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Meiotic recombination protein DMC1 homolog [Glycine max] gi|351726994|ref|NP_001238425.1| | 20 | ||
| – | PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like isoform X1 [Cicer arietinum] gi|502108338|ref|XP_004493447.1| | 23 | ||
| – | PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like isoform X1 [Cicer arietinum] gi|502108338|ref|XP_004493447.1| | 24 | ||
| – | PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like [Solanum lycopersicum] gi|460396872|ref|XP_004243994.1| | 14 | ||
| – | PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like isoform X4 [Cicer arietinum] gi|502150423|ref|XP_004507946.1| | 24 | ||
| – | PREDICTED: DNA repair protein RAD51 homolog 1-like [Cicer arietinum] gi|502150634|ref|XP_004508049.1| | 24 | ||
| – | PREDICTED: meiotic recombination protein DMC1 homolog [Cicer arietinum] gi|502119553|ref|XP_004496658.1| | 16 | ||
| – | RecA [Medicago truncatula] gi|357449857|ref|XP_003595205.1| | 22 | ||
| – | RecA; TAIR: AT3G10140.1 RECA homolog 3; Swiss-Prot: sp|Q8RY99|RECAM_ARATH DNA repair protein recA homolog 2, mitochondrial; TrEMBL-Plants: tr|G7KSL4|G7KSL4_MEDTR DNA repair protein RecA, putative; Found in the gene: LotjaGi1g1v0669500 | 22 | ||
| – | RecA; TAIR: AT3G10140.1 RECA homolog 3; Swiss-Prot: sp|Q8RY99|RECAM_ARATH DNA repair protein recA homolog 2, mitochondrial; TrEMBL-Plants: tr|G7KSL4|G7KSL4_MEDTR DNA repair protein RecA, putative; Found in the gene: LotjaGi1g1v0669500 | 22 | ||
| – | Protein recA; TAIR: AT1G79050.1 recA DNA recombination family protein; Swiss-Prot: sp|Q39199|RECAC_ARATH DNA repair protein recA homolog 1, chloroplastic; TrEMBL-Plants: tr|V7AKD7|V7AKD7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0037500 | 22 | ||
| – | Protein recA; TAIR: AT1G79050.1 recA DNA recombination family protein; Swiss-Prot: sp|Q39199|RECAC_ARATH DNA repair protein recA homolog 1, chloroplastic; TrEMBL-Plants: tr|A0A0R0G3Y7|A0A0R0G3Y7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0037500 | 20 | ||
| – | RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|A0A151SS31|A0A151SS31_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0310500 | 21 | ||
| – | RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|A0A151SS31|A0A151SS31_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0310500 | 21 | ||
| – | RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|A0A072V2Z1|A0A072V2Z1_MEDTR DNA repair protein RecA, putative; Found in the gene: LotjaGi4g1v0310500 | 20 | ||
| – | DNA repair protein RAD51 like 1; TAIR: AT5G20850.1 RAS associated with diabetes protein 51; Swiss-Prot: sp|P94102|RAD51_ARATH DNA repair protein RAD51 homolog 1; TrEMBL-Plants: tr|A0A151SSM0|A0A151SSM0_CAJCA DNA repair protein RAD51 isogeny 1; Found in the gene: LotjaGi4g1v0319500 | 24 | ||
| – | Disrupted meiotic cDNA 1 protein; TAIR: AT3G22880.1 DNA repair (Rad51) family protein; Swiss-Prot: sp|Q96449|DMC1_SOYBN Meiotic recombination protein DMC1 homolog; TrEMBL-Plants: tr|A0A0R0HYK0|A0A0R0HYK0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0309600 | 22 | ||
| – | Disrupted meiotic cDNA 1 protein; TAIR: AT3G22880.2 DNA repair (Rad51) family protein; Swiss-Prot: sp|Q96449|DMC1_SOYBN Meiotic recombination protein DMC1 homolog; TrEMBL-Plants: tr|K7LL69|K7LL69_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0309600 | 22 | ||
| – | Disrupted meiotic cDNA 1 protein; TAIR: AT3G22880.2 DNA repair (Rad51) family protein; Swiss-Prot: sp|Q96449|DMC1_SOYBN Meiotic recombination protein DMC1 homolog; TrEMBL-Plants: tr|A0A151U6N0|A0A151U6N0_CAJCA Meiotic recombination protein DMC1 isogeny; Found in the gene: LotjaGi5g1v0309600 | 22 | ||
| – | RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|G7IIL3|G7IIL3_MEDTR DNA repair and recombination protein; Found in the gene: LotjaGi6g1v0230700 | 21 | ||
| – | RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|G7IIL3|G7IIL3_MEDTR DNA repair and recombination protein; Found in the gene: LotjaGi6g1v0230700 | 20 | ||
| – | RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|G7IIL3|G7IIL3_MEDTR DNA repair and recombination protein; Found in the gene: LotjaGi6g1v0230700 | 20 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| TIGR02012 | TIGRFAM | 1 | 4.55 |