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PS50162

Source: ProSiteProfiles

Description

RecA family profile 1.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006281
Biological process DNA repair The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
Subterm of
GO:0008094
Molecular function DNA-dependent ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of single- or double-stranded DNA, and it drives another reaction.
Subterm of

Associated Lotus transcripts 44

Transcript Name Description Predicted domains Domain count
Lj0g3v0257079.1
– PREDICTED: DNA repair protein RAD51 homolog 2-like isoform X1 [Cicer arietinum] gi|502082384|ref|XP_004487150.1|
Domains
10
Lj0g3v0257079.2
– PREDICTED: DNA repair protein RAD51 homolog 2-like isoform X1 [Cicer arietinum] gi|502082384|ref|XP_004487150.1|
Domains
10
Lj0g3v0257079.3
– PREDICTED: DNA repair protein RAD51 homolog 2-like isoform X1 [Cicer arietinum] gi|502082384|ref|XP_004487150.1|
Domains
14
Lj0g3v0312259.1
– PREDICTED: DNA repair protein XRCC3 homolog [Glycine max] gi|356567224|ref|XP_003551821.1|
Domains
13
Lj1g3v0112930.1
– Meiotic recombination protein DMC1 homolog [Glycine max] gi|351726994|ref|NP_001238425.1|
Domains
20
Lj1g3v4226710.1
– PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like isoform X1 [Cicer arietinum] gi|502108338|ref|XP_004493447.1|
Domains
23
Lj1g3v4226710.2
– PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like isoform X1 [Cicer arietinum] gi|502108338|ref|XP_004493447.1|
Domains
24
Lj3g3v0290230.1
– PREDICTED: DNA repair protein RadA homolog [Cicer arietinum] gi|502081182|ref|XP_004486791.1|
Domains
19
Lj3g3v0422710.1
– PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like [Glycine max] gi|356556644|ref|XP_003546633.1|
Domains
10
Lj3g3v0422710.2
– PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like [Solanum lycopersicum] gi|460396872|ref|XP_004243994.1|
Domains
14
Lj3g3v2318330.2
– DNA repair protein radA-like protein [Medicago truncatula] gi|357513543|ref|XP_003627060.1|
Domains
12
Lj3g3v2318330.3
– DNA repair protein radA-like protein [Medicago truncatula] gi|357513543|ref|XP_003627060.1|
Domains
19
Lj3g3v2737590.1
– PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X1 [Cicer arietinum] gi|502146616|ref|XP_004506531.1|
Domains
16
Lj3g3v2737590.2
– PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X1 [Cicer arietinum] gi|502146616|ref|XP_004506531.1|
Domains
16
Lj3g3v3153010.1
– PREDICTED: DNA repair protein RAD51 homolog 4-like isoform X1 [Cicer arietinum] gi|502145143|ref|XP_004505898.1|
Domains
9
Lj4g3v2172560.1
– PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like isoform X4 [Cicer arietinum] gi|502150423|ref|XP_004507946.1|
Domains
24
Lj4g3v2215340.1
– PREDICTED: DNA repair protein RAD51 homolog 1-like [Cicer arietinum] gi|502150634|ref|XP_004508049.1|
Domains
24
Lj5g3v2045260.1
– PREDICTED: meiotic recombination protein DMC1 homolog [Cicer arietinum] gi|502119553|ref|XP_004496658.1|
Domains
16
Lj6g3v1239560.1
– RecA [Medicago truncatula] gi|357449857|ref|XP_003595205.1|
Domains
22
LotjaGi1g1v0669500.1
– RecA; TAIR: AT3G10140.1 RECA homolog 3; Swiss-Prot: sp|Q8RY99|RECAM_ARATH DNA repair protein recA homolog 2, mitochondrial; TrEMBL-Plants: tr|G7KSL4|G7KSL4_MEDTR DNA repair protein RecA, putative; Found in the gene: LotjaGi1g1v0669500
Domains
22
LotjaGi1g1v0669500.2
– RecA; TAIR: AT3G10140.1 RECA homolog 3; Swiss-Prot: sp|Q8RY99|RECAM_ARATH DNA repair protein recA homolog 2, mitochondrial; TrEMBL-Plants: tr|G7KSL4|G7KSL4_MEDTR DNA repair protein RecA, putative; Found in the gene: LotjaGi1g1v0669500
Domains
22
LotjaGi2g1v0368300.1
– DNA repair protein RAD51; TAIR: AT1G07745.1 DNA repair RAD51-like protein; Swiss-Prot: sp|Q9LQQ2|RA51D_ARATH DNA repair protein RAD51 homolog 4; TrEMBL-Plants: tr|I1LK75|I1LK75_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0368300
Domains
8
LotjaGi3g1v0022200.1
– DNA repair protein RadA like; TAIR: AT5G50340.1 DNA repair protein RadA-like protein; Swiss-Prot: sp|P37572|RADA_BACSU DNA repair protein RadA; TrEMBL-Plants: tr|G7IHX8|G7IHX8_MEDTR DNA repair-like proteinRadA; Found in the gene: LotjaGi3g1v0022200
Domains
19
LotjaGi3g1v0037500.1
– Protein recA; TAIR: AT1G79050.1 recA DNA recombination family protein; Swiss-Prot: sp|Q39199|RECAC_ARATH DNA repair protein recA homolog 1, chloroplastic; TrEMBL-Plants: tr|V7AKD7|V7AKD7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0037500
Domains
22
LotjaGi3g1v0037500.2
– Protein recA; TAIR: AT1G79050.1 recA DNA recombination family protein; Swiss-Prot: sp|Q39199|RECAC_ARATH DNA repair protein recA homolog 1, chloroplastic; TrEMBL-Plants: tr|A0A0R0G3Y7|A0A0R0G3Y7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0037500
Domains
20
LotjaGi3g1v0269600.1
– DNA repair RAD51-like protein; TAIR: AT2G28560.2 DNA repair (Rad51) family protein; Swiss-Prot: sp|Q9SK02|RA51B_ARATH DNA repair protein RAD51 homolog 2; TrEMBL-Plants: tr|A0A0S3SGI1|A0A0S3SGI1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0269600
Domains
13
LotjaGi3g1v0269600.2
– DNA repair RAD51-like protein; TAIR: AT2G28560.2 DNA repair (Rad51) family protein; Swiss-Prot: sp|Q9SK02|RA51B_ARATH DNA repair protein RAD51 homolog 2; TrEMBL-Plants: tr|A0A0S3SGI1|A0A0S3SGI1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0269600
Domains
13
LotjaGi3g1v0372600.1
– DNA repair protein RadA like; TAIR: AT5G50340.1 DNA repair protein RadA-like protein; Swiss-Prot: sp|Q92F42|RADA_LISIN DNA repair protein RadA; TrEMBL-Plants: tr|G7LGQ6|G7LGQ6_MEDTR DNA repair-like proteinRadA; Found in the gene: LotjaGi3g1v0372600
Domains
21
LotjaGi3g1v0435300.1
– DNA repair family protein; TAIR: AT2G45280.1 RAS associated with diabetes protein 51C; Swiss-Prot: sp|Q8GXF0|RA51C_ARATH DNA repair protein RAD51 homolog 3; TrEMBL-Plants: tr|A0A0B2RTD8|A0A0B2RTD8_GLYSO DNA repair protein RAD51 like 3; Found in the gene: LotjaGi3g1v0435300
Domains
15
LotjaGi3g1v0435300.2
– DNA repair family protein; TAIR: AT2G45280.1 RAS associated with diabetes protein 51C; Swiss-Prot: sp|Q8GXF0|RA51C_ARATH DNA repair protein RAD51 homolog 3; TrEMBL-Plants: tr|A0A0B2RTD8|A0A0B2RTD8_GLYSO DNA repair protein RAD51 like 3; Found in the gene: LotjaGi3g1v0435300
Domains
15
LotjaGi3g1v0435300.3
– DNA repair family protein; TAIR: AT2G45280.1 RAS associated with diabetes protein 51C; Swiss-Prot: sp|Q8GXF0|RA51C_ARATH DNA repair protein RAD51 homolog 3; TrEMBL-Plants: tr|G7JS17|G7JS17_MEDTR DNA repair and recombination protein RadA; Found in the gene: LotjaGi3g1v0435300
Domains
10
LotjaGi3g1v0435300.4
– DNA repair family protein; TAIR: AT2G45280.1 RAS associated with diabetes protein 51C; Swiss-Prot: sp|Q8GXF0|RA51C_ARATH DNA repair protein RAD51 homolog 3; TrEMBL-Plants: tr|A0A0R0KE22|A0A0R0KE22_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0435300
Domains
15
LotjaGi3g1v0525200.2
– DNA repair protein XRCC2 like; TAIR: AT5G64520.5 homolog of X-ray repair cross complementing 2 (XRCC2); Swiss-Prot: sp|Q682D3|XRCC2_ARATH DNA repair protein XRCC2 homolog; TrEMBL-Plants: tr|A0A072UXF4|A0A072UXF4_MEDTR X-ray repair cross complementing 2 (XRCC2)-like protein, putative; Found in the gene: LotjaGi3g1v0525200
Domains
9
LotjaGi4g1v0310500.1
– RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|A0A151SS31|A0A151SS31_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0310500
Domains
21
LotjaGi4g1v0310500.2
– RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|A0A151SS31|A0A151SS31_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0310500
Domains
21
LotjaGi4g1v0310500.3
– RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|A0A072V2Z1|A0A072V2Z1_MEDTR DNA repair protein RecA, putative; Found in the gene: LotjaGi4g1v0310500
Domains
20
LotjaGi4g1v0319500.1
– DNA repair protein RAD51 like 1; TAIR: AT5G20850.1 RAS associated with diabetes protein 51; Swiss-Prot: sp|P94102|RAD51_ARATH DNA repair protein RAD51 homolog 1; TrEMBL-Plants: tr|A0A151SSM0|A0A151SSM0_CAJCA DNA repair protein RAD51 isogeny 1; Found in the gene: LotjaGi4g1v0319500
Domains
24
LotjaGi5g1v0309600.1
– Disrupted meiotic cDNA 1 protein; TAIR: AT3G22880.1 DNA repair (Rad51) family protein; Swiss-Prot: sp|Q96449|DMC1_SOYBN Meiotic recombination protein DMC1 homolog; TrEMBL-Plants: tr|A0A0R0HYK0|A0A0R0HYK0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0309600
Domains
22
LotjaGi5g1v0309600.2
– Disrupted meiotic cDNA 1 protein; TAIR: AT3G22880.2 DNA repair (Rad51) family protein; Swiss-Prot: sp|Q96449|DMC1_SOYBN Meiotic recombination protein DMC1 homolog; TrEMBL-Plants: tr|K7LL69|K7LL69_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0309600
Domains
22
LotjaGi5g1v0309600.3
– Disrupted meiotic cDNA 1 protein; TAIR: AT3G22880.2 DNA repair (Rad51) family protein; Swiss-Prot: sp|Q96449|DMC1_SOYBN Meiotic recombination protein DMC1 homolog; TrEMBL-Plants: tr|A0A151U6N0|A0A151U6N0_CAJCA Meiotic recombination protein DMC1 isogeny; Found in the gene: LotjaGi5g1v0309600
Domains
22
LotjaGi6g1v0021400.1
– DNA repair family protein; TAIR: AT5G57450.1 homolog of X-ray repair cross complementing 3 (XRCC3); Swiss-Prot: sp|Q9FKM5|XRCC3_ARATH DNA repair protein XRCC3 homolog; TrEMBL-Plants: tr|A0A1J7GCW2|A0A1J7GCW2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0021400
Domains
12
LotjaGi6g1v0230700.1
– RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|G7IIL3|G7IIL3_MEDTR DNA repair and recombination protein; Found in the gene: LotjaGi6g1v0230700
Domains
21
LotjaGi6g1v0230700.2
– RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|G7IIL3|G7IIL3_MEDTR DNA repair and recombination protein; Found in the gene: LotjaGi6g1v0230700
Domains
20
LotjaGi6g1v0230700.3
– RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|G7IIL3|G7IIL3_MEDTR DNA repair and recombination protein; Found in the gene: LotjaGi6g1v0230700
Domains
20

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TIGR02012 TIGRFAM 1 2.27