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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: inactive rhomboid protein 1-like [Glycine max] gi|356504274|ref|XP_003520922.1| | 11 | ||
| – | PREDICTED: inactive rhomboid protein 1-like [Cicer arietinum] gi|502175388|ref|XP_004515720.1| | 11 | ||
| – | PREDICTED: inactive rhomboid protein 1-like [Glycine max] gi|356557429|ref|XP_003547018.1| | 12 | ||
| – | Chondroitin sulfate proteoglycan 5 [Chelonia mydas] gi|465962020|gb|EMP29585.1| | 10 | ||
| – | Rhomboid-related intramembrane serine protease-like protein [Arabidopsis thaliana] gi|15240938|ref|NP_198667.1| | 7 | ||
| – | PREDICTED: rhomboid protease GluP-like [Solanum lycopersicum] gi|460373127|ref|XP_004232374.1| | 11 | ||
| – | Rhomboid family protein (ISS) [Medicago truncatula] gi|357436521|ref|XP_003588536.1| | 11 | ||
| – | Rhomboid family protein [Arabidopsis lyrata subsp]. lyrata] gi|297812787|ref|XP_002874277.1| | 11 | ||
| – | PREDICTED: rhomboid protein 1, mitochondrial [Vitis vinifera] gi|225456573|ref|XP_002265768.1| | 12 | ||
| – | PREDICTED: rhomboid protein 1, mitochondrial [Vitis vinifera] gi|225456573|ref|XP_002265768.1| | 11 | ||
| – | PREDICTED: inactive rhomboid protein 1-like isoform 1 [Glycine max] gi|356575933|ref|XP_003556090.1| | 12 | ||
| – | Rhomboid protease gluP [Medicago truncatula] gi|357452411|ref|XP_003596482.1| | 11 | ||
| – | Rhomboid-like protein; TAIR: AT1G77860.2 Rhomboid-related intramembrane serine protease family protein; Swiss-Prot: sp|F4I8K2|RBL8_ARATH RHOMBOID-like protein 8; TrEMBL-Plants: tr|A0A1J7GBZ3|A0A1J7GBZ3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0248700 | 13 | ||
| – | Rhomboid-like protein; TAIR: AT2G29050.1 RHOMBOID-like 1; Swiss-Prot: sp|Q0WQX7|RBL1_ARATH RHOMBOID-like protein 1; TrEMBL-Plants: tr|K7M3E7|K7M3E7_SOYBN Rhomboid-like protein; Found in the gene: LotjaGi1g1v0576100 | 13 | ||
| – | Rhomboid-like protein; TAIR: AT2G29050.1 RHOMBOID-like 1; Swiss-Prot: sp|Q0WQX7|RBL1_ARATH RHOMBOID-like protein 1; TrEMBL-Plants: tr|A0A151SUQ7|A0A151SUQ7_CAJCA Rhomboid-like protein; Found in the gene: LotjaGi1g1v0576100 | 12 | ||
| – | Rhomboid-like protein; TAIR: AT1G63120.1 RHOMBOID-like 2; Swiss-Prot: sp|Q9CAN1|RBL2_ARATH RHOMBOID-like protein 2; TrEMBL-Plants: tr|A0A151U6I6|A0A151U6I6_CAJCA Rhomboid-like protein; Found in the gene: LotjaGi2g1v0147200 | 12 | ||
| – | Rhomboid-like protein; TAIR: AT1G52580.1 RHOMBOID-like protein 5; Swiss-Prot: sp|Q9SSR0|RBL5_ARATH RHOMBOID-like protein 5; TrEMBL-Plants: tr|A0A151SXT1|A0A151SXT1_CAJCA Putative polygalacturonase family; Found in the gene: LotjaGi3g1v0009700 | 12 | ||
| – | Rhomboid-like protein; TAIR: AT2G29050.1 RHOMBOID-like 1; Swiss-Prot: sp|Q0WQX7|RBL1_ARATH RHOMBOID-like protein 1; TrEMBL-Plants: tr|I1JLP8|I1JLP8_SOYBN Rhomboid-like protein; Found in the gene: LotjaGi3g1v0225800 | 12 | ||
| – | Rhomboid-like protein; TAIR: AT1G63120.1 RHOMBOID-like 2; Swiss-Prot: sp|Q9CAN1|RBL2_ARATH RHOMBOID-like protein 2; TrEMBL-Plants: tr|V7BC17|V7BC17_PHAVU Rhomboid-like protein; Found in the gene: LotjaGi5g1v0303600 | 13 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 5.26 |