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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0798000 |
| Transcript ID | LotjaGi1g1v0798000.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Endoribonuclease Dicer-like protein 3; TAIR: AT1G01040.1 dicer-like 1; Swiss-Prot: sp|Q9SP32|DCL1_ARATH Endoribonuclease Dicer homolog 1; TrEMBL-Plants: tr|K7N0F5|K7N0F5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0798000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:136815175..136826484) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGAGGGGTACGGGTACAGTTAGGGTTCCGAAGGGGGATGACACGGCGACGGCGACGGCGGGGGCGGGGGGAGGTTC TTACTGGTTGGATGCCTGTGAGGACATCTCGTGTGATTTTATTGATTTTGATGCCGCGTCATCCATTGTTGTCTCAGTCT CAGACCACCCTGATAACGCTGCTTCCAATCAGGATTTCTTTGGTGGCATTGATCGAATCTTAGACAGCATTAAGAACGGT GCTGGCCTCCCTCTTGCTGCTCAACCCAATTCCACTTCTACTTCTACTACTACTACTACTGCAGATGCCTCTCCTTCCAA GGAAGATGATGCTCTTGTTGGTTTTCTCAATAATAATGGAGGATTGCCACATCCTCGCACTCATGCTTTTGACCATTCTG GATCTCAGAATAACCTGTCCAATGCTAATCAAGGGGAAGGGGGAGTGTTGGTTACTTGTTCTCAGGAAAATCATCTTCAT CTTCATCTTCATGTTGATGCTATTGCTGACGAAACATGCAACAAAAGGCCTAGGCTTGCCAGCTACAACAATGACAGGCC TTATTATGCCAGACTCAACCACAGAGACAGGTGTTTCGATACCAGGAAGAGGCCAAGGGACAGGGATAATAAACATTGTG GTACTGGTAGGAGAGATGTTAATGTTAGAGACCAGAGGGGTTACTGGGAGAGGGATAAGTCAGGTTCCAATGACTTGGTT TTTCGCTTGGGCACTTGGGAAGCTGACCGTCATCCACAAGACAAGATACCAAATGAGGTTAAACGGGAAACCAATGCCAA CCTTCATATCAAATCTCAGGAGGCTAAGGACAGGCTCCCTGAGGAAAAAGCCAGGCAGTATCAGTTGGATGTTCTTCAGC AGGCAAAGGAGAATAATACTATAGCTTTTCTTGAAACTGGAGCAGGGAAAACCTTAATTGCTGTTCTTCTCATTAAAAGC ATGCAAGATACTTTACAAAACCAGAATAAGAAATTGCTTGCAGTATTTCTAGTTCCAAAAGTTCCACTTGTTTACCAGGT AATATACCTTTTTTGACAATTTAATTCTTTTGCTCAGATACAGTATAAGATTTAAGTAACACAGTACAAGTTTTGTCCAT TCACGTAGTTTGAGTTCGTGATTCTATATCTTTGTCTGTTTACAGCAAGCTGAAGTAATTCGTGAGCGAACTGGTTATCA AGTGGGACACTATTGCGGAGAAATGGGGCAAGATTTCTGGGATGCTCGCAGGTGGCAGCGTGAATTTGACACCAAACACG TATGTTTTGACATTTCTATTTAAGATAATTGGCCTTTGCTTTCTGTTACATTGTTCTTTCTTTCGTTTATTTCTGTTTGA GTCCACTGATTTAGTGTTTTATTTTTTGTTATCCTCTACAATATAATATTTGAATTCTAAATTCTGATCTAGTTAAATTT TCTAAATATTTGTGCTTATTTTCCTCAGGTTTAGAGTTGGCGACTGGTTAAGTATAACTTGTATTTCTATTATTAATTCA AAAGATAAGTTGTTTATTTATGGGCTTATGGCCTATGTATTTGTGCTCTTTCAATAGAAGGGAAGTCAGAATTAGCATGG GCAGCCTTTGTAGTGAATGGGCCATAAGTAGTGACGCGTTACCAAATCCATCAAACTTGCATATCTTGTACTGCAAATCA ACTTTTTATTAGAATAGTGGGGGCGGCAAGAACCGAACTCTGTATCACTTTGTCACAGAGGCTCCATACCATCTCAAGAA CCTACTATCCCAAAAAACTTAAACTATTATGTGAAAGCACATAATGACTTTATATTGTATCTCTAACACATTTGTTGAGG TTTACCTTGTTGGTTTATACAAAATTATCGAAGTTAGAATCTATGGTCTTTTTATGTTAATTCTAGCAGCTGGATTGAAT CTAAGCTTAGTTTTATTAGTAGTATGTTAAACCTTTTTTCCCAATCAATCATATCTGTATGAGAATGCCAATAGATGTTG AACTCATCTAAGGTGGAATGCTTTTTAGTTTCCTTAGTTATAATAATTTGGATTTCAGAACATGTGGGTATGATGGGTAT ACTTCTTAATGATTTTGTACGTAGGCTTTTATTGTTCTTTTTGTTTTAGTATGTTCTCATTGCTTCAATATATGATGGGT ATGGTGTTGTGCCAACATGTAGGTTTGGTTCCGTGGATGTCTTCAAGACACAACTTATCCTAAAAACTTGAAATGTGTTG TTATTGGCTTGTTTTTTTAGAACTCTTGTAATTTCTTTTTAATTTAATAAAAAAGTAGATGTATGATGTGCAGATGCTAG TAAGCCACGTCCTCCCGTCCCCTCCCCCCCCTATTTATCTTCCCAGCCTTACTCTTCTTTCTTAGCCTTGTATGTATTTA TCCTGCAATTACTCAATTGGTTATTTTTACTATAGGTTCTAGTCATGACCGCTCAAATTCTTTTAAACATTTTGAGGCAT AGCATAATAAAAATGGAAGAAATCAATCTCCTGATTCTGGATGAGTGCCATCATGCTGTGAAGAAACATCCATATTCACT GGTTATGTCCGAGTTCTACCATACAACACCCAAAGATAAGAGACCAACTGTGTTTGGAATGACAGCTTCTCCTGTTAACT TGAAAGGTAGTTATTGAAGTTCTCAACTAAACTTTGGCTCCTATGTTTTTCAAGCTATGATTTTCTTGGGGATTGAATCC CTTATTAACTATTTTCTTCTCCCTTGATATATGTAATATTTTCATTGCTTTATTTTTTGACTCAACGTTCATGCTTATGG TATGTTCAGGTGTCTCCAGCCAAGTAGACTGTGCAATAAAAATTCGTAATCTTGAAAGTAAGCTAGATTCAATAGTTTGT ACCATTAAAGATCGTAAAGAGCTGGAGAAACATGTGCCAATGCCCTCTGAAGTTGTGGTGGAATATGATAAAGCTGCCAG TTTATGTTATCTGCATGAGCAGATAAAGCAGATGGAATTTGAAGTTGAAGAAGCTGCAAAATCTAGTTCAAGAAGAAGCA AATGGCAGTTTATGGGAGCAAGAGATGCTGGAGCTAAGGAAGAGCTTCGCCAAGTATACGGTGTTTCAGAAAGAACAGAA AGTGATGGAGCTGCAAACCTAATTCAGAAGTTGAGAGCTATTAATTATGCACTTGGTGAACTGGGACAATGGTCTGCATA TAAGGTACATACTATTTCATGGAGAATGAGGATTCATGATGTTCTTGGCTATCTTTGTAATTTCTCTTTCCTTTACAGGT TGCACAATCATTTCTAGCAGCTTTGCAAAATGATGAAAGGGCAAACTTCCAACTTGATGTCAAATTTCAGGAATCTTATC TGAGTAAAGTTATCTCTCTTCTGAAATGTCAACTGTCAGAGGGTGCAGTTTCTGAAAAAAATGCCGCTGAGGTTAACCCG GATTCTGGTGCAGCTCACAGTGGTTCAGAACATGAAGAGATTGAAGAAGGAGAGCTTCCAGACGGCCATGGTGAGTCTTC TTGTTGAAGGTTCATAATGCTCAAATTACATATGTGGAGTAGTTCATAGTTTTGAGAATTTTAAATTATCCTGATAAGTT GTACGACTTTAGTTTTTGTAATAATTTAGGTAAATTATTAGTATTAAAAATGGACATCTCAGAATTTTGAAAAAAAAAAA TTAACATGTGGAAGAGCATTAGTATTTGCATCAACATTTGTGCATGAATATTCAGAGCTTGGCTGTGCAGATCTGTATTG CTTCCCATGTAGGAATATCAAGAAAAATTGATGTCACCGAAACCCTAAAATATACACTGAGATTATGCTTGTTCCCACTC AACATCATGTTATTTTTCAGTTTTCACTATATTTTTATTTTATGCTTCACTCTGTACAGCTATTTAAGATGGGATATAGT ATGATGTTTTATTTAATCTGGCACACTTTTGTTTAGTGGTCTCTGGCGGGGAGCATGTTGATGTCATAATAGGAGCTGCT GTGGCTGATGGCAAAGTTACCCCTAAAGTGCAGGCACTAATTAAAATACTTCTCAAGTATCAGAACACAGAAGACTTCCG TGCTATCATCTTTGTTGAGCGTGTTGTGTCTGCATTAGTTCTACCCAAGGTTATATATACACATTAATTGCATACTCCTT TTGTTGATTCAATTTCATAATCAAGATCCTATTGGCCCATTGTCTGTCAATCTTGCAGGTTTTTGCAGAGCTTCCATCTC TTAGTTTTGTGAAGTGTGCAAGCTTGATTGGTCATAACAATAGTCAGGAAATGCGAACCTACCAAATGCAAGATACAATT GCTAAGTTTCGAGATGGGCGGGTAAGATTTATATCTTGCTGAATTGGCTCCACAATCAGTTTCCAAAGGGGAGAACTAAT CCCTTGTATTCTCTCAATCTCACTTACTCATTTATTTGCAGGTCACATTGTTAGTTGCCACCAGTGTTGCTGAAGAAGGA CTTGATATCCGACAATGCAATGTTGTTATTCGCTTTGACCTTGCAAAGACTGTTCTAGCATACATTCAATCTAGGGGCCG TGCTAGAAAGCCTGGTTCTGATTACATCCTGATGGTTGAGAGGTACTGGTTTTGGCCTTGTCAACTGTTGGCATTTTCTT TTTTGTGTTGAGTTAAAGTGTGTTTTTCTGGAGATTTAGTAAACCCAATACAATTGGAACCTCATTGGGAGAGAGTTTAT TTTGTTTGGCCTGTTGACCTGTTTTTCATACTGCTCATTTGCATAAACTTAAGTTAATGGTCTGCTTTAATGGCATTAGT TCTGTCATTAATAGTTGTGTGTTAAAAGGTTCATATTCATTCCCTTCCCCTTCAACCAATGTAAAATGAAAAAAGTTTTA TTCTTTTTTGGGTACTTTTCAAATTATTATTGTTTCTCCTCCAACCATGTATTCTCTTTTTTTTTTTGTGTTCTTCAAGA GTATTCCTTGTCCTCATTTTTATTTGTAATTTATTCTCTTCATCTCAATTAAATTCTTCTTTTATTGAATAATAATAGGA ACCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATCATCATTATTATTATTATTATTATTATTATTATTA TTATTATTATTATTATTATTATTTGCAAGACTGGTTCAAGACGTGGTGCGGGTAAAGGGAAAGCTGGCTAAAGTTGAGGC AGTGTCCTCGCTAGGATTTGAACATAGGATCGAGTAGTCTGCTGAAAAACTAGGTGCCACTTGAGCTAAGGCTCTTGTGC TATAGTTGGTTCTCTATTTAAAATAAAGTTTTAATTGCACTTTTGGTCCTCTAGTTTGAACTATGTATGATCTTAGTCCT CCAATAATTGTTTTAGCAGATTTAGTCTGTCGACTTTTTTAATTGTTATAATCAAGTCCCTTAATGACTATTATTCTTCT TTAAACTCTCAAATACTCATTCTTCACAAGTTGAATTCATTTAATCATTGTAGAGGTTTTTCCCATCAAAATTTTAAATT TCGACAGAAACAAAATAATCTGAATTTCCCCCTCTTCTAGCCCTAATATCATTACCCTACAAAATCCTTCAAAATTTATC AAAATTTCACTAATAGTCTTACTTCTAAAATTTTAACATATATCCATTGTATCTCAAACCCTAAAATATTTGGAAAGAAA ATGAAGATTTCATGATTATATGCATTAATGCATATGAAAACTGAGAGAAGGGCCAATTTTGCTTAATTTTAAAAGTAGAG GGACCTGATTAGCTCGAAAAAAACCAGAGGGTCCAAAATCACACATAGTCCAAACTAAGGGGAACTAAAATGCAATTAAC TCTAAAATAGAAATAAACTTGTTTGTGATTTAGTGTCAGAATGATTTAATTATTCAATGTGTTCTTTATTTTTATCAACA ATGATTTATGCTGTGGAATGTTTCTATTTTTCCTTCTCCAATAGGCTTGCAGAAACTAACCCTGTGAATTTTTATTGGAT TTGGGCCTAATCAGCATTATTTTCCATCTTTTACCTTTCAAACTATGTTTCACATGATAACGGGTGCTGAATAACTGAAC ACTCTTCCTAACCTCCCTGTACTCCCCTGCCCTTGATTTTTCCTGTATATAGGGGGAATTTGTCACATGAAGCATTCCTA AGGAATGCCAGGAACAGTGAGGAAACTTTGCGCAAAGAAGCAATAGAGAGAACAGACCTCAGTCATCTGAAAGACACTTC AAGGTTGATTTCTGTAGAAACCCAGCCTGGAACAGTTTACCAGGTGAAGTCAACCGGTGCAGTCGTGAGCTTAAATTCTG CTGTAGGTCTTGTCCACTTCTACTGCTCTCAGCTACCTAGTGACAGGTGCTACATTTCTGCCTTAGATTGGTGATTTGAT TTACTAGCCTTTTATTTTTATCATCAAAATATGATTTGGATGTCTTCTATTCATTATCCAGATATTCAATTCTTCGTCCT GAGTTTATTATGGAGAGGCATGAAAAACCTGACGGTCCTACTGAATATTCTTGCAAGCTTCAACTGCCATGTAATGCACC ATTTGAATATCTAGAGGGTCCTATCTGCAGTTCAATGCGCCTGGCACAACAGGCATGCCATCATTTATTTATGAATTTAA TTTATTCCGCTCGTTTATGCAAGAAGTGTTGGTAATTATTTTGGTGTTTTGCAGGCTGTTTGTTTGGCTGCTTGCAAGAA ACTGCATGAGATGGGAGCCTTCACTGACATGCTATTACCTGATAAAGGAAGCGGGGGAGAAAAAGAAAAGGCTGAGCAAA ATGATGAAGGAGATCCCCTTCCGGGGACTGCTAGACACAGGGAGTTCTATCCTGAAGGTGTGGCTGACATACTGAAGGTT GGTTCATTCTGCATGTGGTCTATTCCGCTATTTCTGTGTGGGGTTTGGTATATAGCTGATCAGAACATTCAACAATGAAA ACTAAAGCCTTTTCCCACTAGGTGGGGTCAGCTACAAGGATCAAGTGATGCTATAATTTCCTATCATGAATCATGGCCAA TGACATACCATTTAAATTCAAATCTTGCTTACTAACCATGACAGTGTCATTTATTATTTGTAAAGAAAGCTTGTGTATCA TATCTTTAATCAAATGCTTTTGACCTTGAAGGCTTTGGAGATGGATTCTTAATGAAACAAGGAAGACAGATAGTGAAAAA ATGCAATCTAAATATTTTCCCATTTAGGAAAAGAATAGGATACTTCTATAGAAATGAAAATGCGTCAAATTTGTATCTGT GCCATGAAGAGTGTGCTTTTAGTAGTCTTTTGTTGCACCAAGGGATTTATTCATACCTTTCAGTTTTTCCCATGCCAATT CTGTGTGTTTATTGTCTTACCCTAAAATATCCATTATTGCTTAATGCTATCTTGTTTTTTAGGGAGAATGGATCTTATCT GGAAAGGATGCTTGCAAGAGCTCCAAATCGCTTCATCTTTTTATGTACGTTGTGAAGTGTGAAAATATAGGCCAGTCAAA GGATCCATTCTTGACTCAAGTTTCAGATTTTGCAGTTCTTTTTGGCAATGAGCTGGATGCAGAGGTAGTATTATTTATTT GTGCTACTGCTTCTAGATTGTATTTGAGTATCATACACTCATTTGCTACCTCCAATCACATCTCTTTATGCAGGTGTTAT CGATGTCAATGGATCTATTTATCGCACGAACCGTGACTACAAAGGCATCTCTTGTCTTTGGAGGGTCGATAAGTATCACT GAGAGTCAGGTTGACAGATTTGACTATCCATTTTTATACTTGTTTTAATGTTCATAATTAAATTTTTTAGTTTTTGACGC CTGGATGAAACCTGTTTTTTATGGTATGCAGTTGGCATCCCTGAAAAGCTTTCATGTAAGATTAATGAGCATTGTCTTGG ATGTGGATGTTGAACCGTCTACCACTCCTTGGGATCCTGCAAAAGCATATTTATTTGTCCCAATGGTTGGCGATAAGTCT TTAGATCCTATGAACCAAATTGACTGGCATCTGGTTGAGACAATAACTGGAGCTTGTGCATGGAAAAATCCCCTCCAGAG AGCTCGGCCAGATGTTTATCTTGGCACTAATGAGAGAACATTAGGTGGAGATAAAAGGGAATATGGATTTGTGAAATTGC GGCATGGCATGGCTTTTGGGCAAAAATCACATCCAACCTATGGAATCAGAGGAGCTGTGGCCCAGTTTGATGTGGTGAAA GCTTCTGGGTTGGTTCCTAACAGAGATACCATGGAGACACAAAAACATAACAATATGAATACCAAAGGAAAATTGATGAT GGCGGATGCCTGTGCTAATGCAGAGGATCTGGTAGGGAGAATTGTAACTGCTGCACATTCCGGGAAGAGGTTTTATGTTG ATTCAATACGGTATGATATGTCAGCAGAGAACTCTTTCCCTAGGAAAGAAGGGTATCTTGGTCCTCTGGAGTACAATTCA TATGCTGATTATTACAAGCAAAAGTATGTGTATTCTCTTTTACATTATGTTGGTCTTCTTATTTTGTCCTTTTTGTTTTC AAATTTTTTATCAACCAGCCAAGCCTCCCTGTTCATTTTTTCTTCACTCTTCCATTTCTGTGCCATGAACAATCTTATCG AATGAAATCATGTTAGCCATGTTGCACCTCTAATGTTGTGCTGGAAGAACAAGAAGCTAATCTTAATCTGTGAAGGAAAG CTTTTGTCACCTTCAAGTTTTGAGGGCTTTATCAACAATGTCCCATGGAAAGTGACAATAGCTTGTTGATCCTTCCAGAC TAGAGAAGCTTTTTGTCTCTTCTTGCACAACTGAGTGGTGCATGTGGCTACTGGTTCTCTTTTATGGCTTTTATTTAGGT ATGGAGTTGATTTAATTTACAAGCAGCAACCTCTTATAAGAGGGCGTGGTGTATCATACTGCAAGAATCTACTGTCGCCT CGATTTGAACACAGTGAAGGTGTGCTCTCGTTATACCTATCCTAGAATATTATGCTTTTTTTTTGCATATTTGTAGATTC TTATTTAACGGAAAATGTTGTGTTGTCATAGAACATGAAGGTGAATCTGAAGAGGATCATGACAAGACTTATTATGTTTT CCTTCCTCCTGAGTTATGCCTAGTACACCCTCTGCCTGGATCACTTGTTCGTGGTGCTCAGAGGTTGCCTTCAATAATGA GGAGGGTGGAAAGCTTGCTACTTGCAGTTGAGCTTAAGAATATGATAAATTATCCCGTCCAGGCTTTAAAGGTATCTTCT CGGCTCAAGGTAGTTTAACTTCTACTGTTAGTTTTATCAGTTAACTCACGTCCTCTACATGAACAGATCTTGGAAGCCTT GACTGCTGCCTCTTGCCAGGAGACATTCTGCTATGAAAGGGCTGAGCTTCTAGGAGATGCTTACTTGAAATGGGTTGTTA GTCGATTTCTCTTCCTAAAGTACCCCCAGAAACATGAAGGCCAGCTTACTAGGATGAGGCAACAAATGGTCAGTAACATG GTGTTATATCAGTTTGCATTAAGTAAAGGGCTTCAATCATATATTCAAGCAGATCGCTTTGCCCCATCTAGATGGGCGGC TCCTGGGGTGCTGCCTGTCTTTGATGAGGATACGAAGGATGGAGAGTCATCTATATTTGACCAGGACCAGTCCATTTCTA AGACGGGGATGATGGACAACTCTGATAGATTTGACAATGAAATGGAAGATGGTGAGATTGAGAGTGATTCAAGTTCTTAT AGAGTTCTGTCCAGCAAGACACTTGCAGATGTAGTGGAAGCTCTGATTGGGGTATATTATGTCCAAGGTGGTAAGAATGC TGCTAACCACCTTATGAAATGGATTGGTATTCAGGTTGAGTCTGATCCTGATGAGATGGAATGTACAAGAAAGCCATTCA GTGTTCCAGACAGCATAATTAGGAGTGTTGATTTTGATGCTTTAGAAGGTGCTTTAAATTTGAAGTTTAATGACAAGGGG TTGCTGATAGAAGCCATAACTCATGCCTCCAGACCATCTTCAGGAGTATCCTGTTATCAGCGGTTAGAGTTCGTTGGTGA TGCTGTCTTGGACCATCTTATAACCAGGCACTTGTTTTTCAGTTACACAGATCTGCCACCGGGACGACTGACTGACCTTC GGGCTGCTGCTGTAAACAATGAAAATTTTGCACGTGTTGCAGTTAAACACAATCTTCACCTGCATCTCCGTCACGGATCC AGCGCCCTAGAAAAACAGGTCTTATTTCTTTCTTAAGACTTATTCTTACTTGGAGATGGATCACATATAATCTCTATCCA TAATGTTCCTAATTTCTTGAGCATGTCAGTCATCTTTTCGGATACTCCTGACATTGTGCTTTTGGTTGTCTACAGATTAA AGAATTTGTTAAGGAAGCTCAAAATGAATTGTCACAGCCAGGGTTTAACTCCTTCGGTCTGGGGGACTGCAAAGCTCCAA AGGTCCTTGGTGACATTGTTGAATCTATTGCTGGTGCCATTTTTCTTGACAGTGGGAGGAATACTGCTGCTGTATGGAAG GTTAGCGCCTAGCTTTTAAACATATACCATTATCCTCCTTCATTTTTTTACCAAAATGGGAATAAAATTTAAATTGGAAG ACATTGTTGGTCTTGCAAAATTTTCAGGTTTTTCAGCCTCTTTTACATCCTATGGTTACCCCAGAGACTTTGCCAATGCA TCCTGTGCGTGAGCTGCAAGAGCGATGCCAGCAGCAGGCAGAAGGTCTAGAGTACAGAGCAAGTCGAATTGGCAATTTGG CTACTGTTGAAGTATTCATTGATGGGGTACAAGTAGGGGCTGCTCAAAATCCACAGAAAAAAATGGCACAGAAATTAGCT GCCAGAAATGCCCTTGCTGCTTTGAAAGAGAAGGAAGTGGTAAAAACTCCGGAGAAGAATGATGAAAACATGAAGAAGAG TGGAAACCAGACATATACCAGACAGACATTAAATGATATCTGTCTGCGAAGAAATTGGCCTATGCCATTGTACAGGTATG AAACTATTAAGTTACTTATATAGCAGCATGAATGGTTGGTGGTTATAGGGCCAAAATGACTTAATTTATTTGTATACTAA AACTTGTAGGTGTGTGAGTGAGGGTGGTCCAGCACATGCAAAGAGGTTTACATTTGCGGTGCGCGTGAATACTACTGATA GAGGATGGACAGATGAATGTGTTGGAGAGCCAATGCCAAGCGTCAAGAAGGCCAAAGACTCAGCTGCTGTTCTTCTCTTA GAGCTACTAAACAAATTATATTCATCGTAG
CDS sequence (LotjaGi1g1v0798000.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGGGGTACGGGTACAGTTAGGGTTCCGAAGGGGGATGACACGGCGACGGCGACGGCGGGGGCGGGGGGAGGTTC TTACTGGTTGGATGCCTGTGAGGACATCTCGTGTGATTTTATTGATTTTGATGCCGCGTCATCCATTGTTGTCTCAGTCT CAGACCACCCTGATAACGCTGCTTCCAATCAGGATTTCTTTGGTGGCATTGATCGAATCTTAGACAGCATTAAGAACGGT GCTGGCCTCCCTCTTAATAACCTGTCCAATGCTAATCAAGGGGAAGGGGGAGTGTTGGTTACTTGTTCTCAGGAAAATCA TCTTCATCTTCATCTTCATGTTGATGCTATTGCTGACGAAACATGCAACAAAAGGCCTAGGCTTGCCAGCTACAACAATG ACAGGCCTTATTATGCCAGACTCAACCACAGAGACAGGTGTTTCGATACCAGGAAGAGGCCAAGGGACAGGGATAATAAA CATTGTGGTACTGGTAGGAGAGATGTTAATGTTAGAGACCAGAGGGGTTACTGGGAGAGGGATAAGTCAGGTTCCAATGA CTTGGTTTTTCGCTTGGGCACTTGGGAAGCTGACCGTCATCCACAAGACAAGATACCAAATGAGGTTAAACGGGAAACCA ATGCCAACCTTCATATCAAATCTCAGGAGGCTAAGGACAGGCTCCCTGAGGAAAAAGCCAGGCAGTATCAGTTGGATGTT CTTCAGCAGGCAAAGGAGAATAATACTATAGCTTTTCTTGAAACTGGAGCAGGGAAAACCTTAATTGCTGTTCTTCTCAT TAAAAGCATGCAAGATACTTTACAAAACCAGAATAAGAAATTGCTTGCAGTATTTCTAGTTCCAAAAGTTCCACTTGTTT ACCAGCAAGCTGAAGTAATTCGTGAGCGAACTGGTTATCAAGTGGGACACTATTGCGGAGAAATGGGGCAAGATTTCTGG GATGCTCGCAGGTGGCAGCGTGAATTTGACACCAAACACGTTCTAGTCATGACCGCTCAAATTCTTTTAAACATTTTGAG GCATAGCATAATAAAAATGGAAGAAATCAATCTCCTGATTCTGGATGAGTGCCATCATGCTGTGAAGAAACATCCATATT CACTGGTTATGTCCGAGTTCTACCATACAACACCCAAAGATAAGAGACCAACTGTGTTTGGAATGACAGCTTCTCCTGTT AACTTGAAAGGTGTCTCCAGCCAAGTAGACTGTGCAATAAAAATTCGTAATCTTGAAAGTAAGCTAGATTCAATAGTTTG TACCATTAAAGATCGTAAAGAGCTGGAGAAACATGTGCCAATGCCCTCTGAAGTTGTGGTGGAATATGATAAAGCTGCCA GTTTATGTTATCTGCATGAGCAGATAAAGCAGATGGAATTTGAAGTTGAAGAAGCTGCAAAATCTAGTTCAAGAAGAAGC AAATGGCAGTTTATGGGAGCAAGAGATGCTGGAGCTAAGGAAGAGCTTCGCCAAGTATACGGTGTTTCAGAAAGAACAGA AAGTGATGGAGCTGCAAACCTAATTCAGAAGTTGAGAGCTATTAATTATGCACTTGGTGAACTGGGACAATGGTCTGCAT ATAAGGTTGCACAATCATTTCTAGCAGCTTTGCAAAATGATGAAAGGGCAAACTTCCAACTTGATGTCAAATTTCAGGAA TCTTATCTGAGTAAAGTTATCTCTCTTCTGAAATGTCAACTGTCAGAGGGTGCAGTTTCTGAAAAAAATGCCGCTGAGGT TAACCCGGATTCTGGTGCAGCTCACAGTGGTTCAGAACATGAAGAGATTGAAGAAGGAGAGCTTCCAGACGGCCATGTGG TCTCTGGCGGGGAGCATGTTGATGTCATAATAGGAGCTGCTGTGGCTGATGGCAAAGTTACCCCTAAAGTGCAGGCACTA ATTAAAATACTTCTCAAGTATCAGAACACAGAAGACTTCCGTGCTATCATCTTTGTTGAGCGTGTTGTGTCTGCATTAGT TCTACCCAAGGTTTTTGCAGAGCTTCCATCTCTTAGTTTTGTGAAGTGTGCAAGCTTGATTGGTCATAACAATAGTCAGG AAATGCGAACCTACCAAATGCAAGATACAATTGCTAAGTTTCGAGATGGGCGGGTCACATTGTTAGTTGCCACCAGTGTT GCTGAAGAAGGACTTGATATCCGACAATGCAATGTTGTTATTCGCTTTGACCTTGCAAAGACTGTTCTAGCATACATTCA ATCTAGGGGCCGTGCTAGAAAGCCTGGTTCTGATTACATCCTGATGGTTGAGAGGGGGAATTTGTCACATGAAGCATTCC TAAGGAATGCCAGGAACAGTGAGGAAACTTTGCGCAAAGAAGCAATAGAGAGAACAGACCTCAGTCATCTGAAAGACACT TCAAGGTTGATTTCTGTAGAAACCCAGCCTGGAACAGTTTACCAGGTGAAGTCAACCGGTGCAGTCGTGAGCTTAAATTC TGCTGTAGGTCTTGTCCACTTCTACTGCTCTCAGCTACCTAGTGACAGATATTCAATTCTTCGTCCTGAGTTTATTATGG AGAGGCATGAAAAACCTGACGGTCCTACTGAATATTCTTGCAAGCTTCAACTGCCATGTAATGCACCATTTGAATATCTA GAGGGTCCTATCTGCAGTTCAATGCGCCTGGCACAACAGGCTGTTTGTTTGGCTGCTTGCAAGAAACTGCATGAGATGGG AGCCTTCACTGACATGCTATTACCTGATAAAGGAAGCGGGGGAGAAAAAGAAAAGGCTGAGCAAAATGATGAAGGAGATC CCCTTCCGGGGACTGCTAGACACAGGGAGTTCTATCCTGAAGGTGTGGCTGACATACTGAAGGGAGAATGGATCTTATCT GGAAAGGATGCTTGCAAGAGCTCCAAATCGCTTCATCTTTTTATGTACGTTGTGAAGTGTGAAAATATAGGCCAGTCAAA GGATCCATTCTTGACTCAAGTTTCAGATTTTGCAGTTCTTTTTGGCAATGAGCTGGATGCAGAGGTGTTATCGATGTCAA TGGATCTATTTATCGCACGAACCGTGACTACAAAGGCATCTCTTGTCTTTGGAGGGTCGATAAGTATCACTGAGAGTCAG TTGGCATCCCTGAAAAGCTTTCATGTAAGATTAATGAGCATTGTCTTGGATGTGGATGTTGAACCGTCTACCACTCCTTG GGATCCTGCAAAAGCATATTTATTTGTCCCAATGGTTGGCGATAAGTCTTTAGATCCTATGAACCAAATTGACTGGCATC TGGTTGAGACAATAACTGGAGCTTGTGCATGGAAAAATCCCCTCCAGAGAGCTCGGCCAGATGTTTATCTTGGCACTAAT GAGAGAACATTAGGTGGAGATAAAAGGGAATATGGATTTGTGAAATTGCGGCATGGCATGGCTTTTGGGCAAAAATCACA TCCAACCTATGGAATCAGAGGAGCTGTGGCCCAGTTTGATGTGGTGAAAGCTTCTGGGTTGGTTCCTAACAGAGATACCA TGGAGACACAAAAACATAACAATATGAATACCAAAGGAAAATTGATGATGGCGGATGCCTGTGCTAATGCAGAGGATCTG GTAGGGAGAATTGTAACTGCTGCACATTCCGGGAAGAGGTTTTATGTTGATTCAATACGGTATGATATGTCAGCAGAGAA CTCTTTCCCTAGGAAAGAAGGGTATCTTGGTCCTCTGGAGTACAATTCATATGCTGATTATTACAAGCAAAAGTATGGAG TTGATTTAATTTACAAGCAGCAACCTCTTATAAGAGGGCGTGGTGTATCATACTGCAAGAATCTACTGTCGCCTCGATTT GAACACAGTGAAGAACATGAAGGTGAATCTGAAGAGGATCATGACAAGACTTATTATGTTTTCCTTCCTCCTGAGTTATG CCTAGTACACCCTCTGCCTGGATCACTTGTTCGTGGTGCTCAGAGGTTGCCTTCAATAATGAGGAGGGTGGAAAGCTTGC TACTTGCAGTTGAGCTTAAGAATATGATAAATTATCCCGTCCAGGCTTTAAAGATCTTGGAAGCCTTGACTGCTGCCTCT TGCCAGGAGACATTCTGCTATGAAAGGGCTGAGCTTCTAGGAGATGCTTACTTGAAATGGGTTGTTAGTCGATTTCTCTT CCTAAAGTACCCCCAGAAACATGAAGGCCAGCTTACTAGGATGAGGCAACAAATGGTCAGTAACATGGTGTTATATCAGT TTGCATTAAGTAAAGGGCTTCAATCATATATTCAAGCAGATCGCTTTGCCCCATCTAGATGGGCGGCTCCTGGGGTGCTG CCTGTCTTTGATGAGGATACGAAGGATGGAGAGTCATCTATATTTGACCAGGACCAGTCCATTTCTAAGACGGGGATGAT GGACAACTCTGATAGATTTGACAATGAAATGGAAGATGGTGAGATTGAGAGTGATTCAAGTTCTTATAGAGTTCTGTCCA GCAAGACACTTGCAGATGTAGTGGAAGCTCTGATTGGGGTATATTATGTCCAAGGTGGTAAGAATGCTGCTAACCACCTT ATGAAATGGATTGGTATTCAGGTTGAGTCTGATCCTGATGAGATGGAATGTACAAGAAAGCCATTCAGTGTTCCAGACAG CATAATTAGGAGTGTTGATTTTGATGCTTTAGAAGGTGCTTTAAATTTGAAGTTTAATGACAAGGGGTTGCTGATAGAAG CCATAACTCATGCCTCCAGACCATCTTCAGGAGTATCCTGTTATCAGCGGTTAGAGTTCGTTGGTGATGCTGTCTTGGAC CATCTTATAACCAGGCACTTGTTTTTCAGTTACACAGATCTGCCACCGGGACGACTGACTGACCTTCGGGCTGCTGCTGT AAACAATGAAAATTTTGCACGTGTTGCAGTTAAACACAATCTTCACCTGCATCTCCGTCACGGATCCAGCGCCCTAGAAA AACAGATTAAAGAATTTGTTAAGGAAGCTCAAAATGAATTGTCACAGCCAGGGTTTAACTCCTTCGGTCTGGGGGACTGC AAAGCTCCAAAGGTCCTTGGTGACATTGTTGAATCTATTGCTGGTGCCATTTTTCTTGACAGTGGGAGGAATACTGCTGC TGTATGGAAGGTTTTTCAGCCTCTTTTACATCCTATGGTTACCCCAGAGACTTTGCCAATGCATCCTGTGCGTGAGCTGC AAGAGCGATGCCAGCAGCAGGCAGAAGGTCTAGAGTACAGAGCAAGTCGAATTGGCAATTTGGCTACTGTTGAAGTATTC ATTGATGGGGTACAAGTAGGGGCTGCTCAAAATCCACAGAAAAAAATGGCACAGAAATTAGCTGCCAGAAATGCCCTTGC TGCTTTGAAAGAGAAGGAAGTGGTAAAAACTCCGGAGAAGAATGATGAAAACATGAAGAAGAGTGGAAACCAGACATATA CCAGACAGACATTAAATGATATCTGTCTGCGAAGAAATTGGCCTATGCCATTGTACAGGTGTGTGAGTGAGGGTGGTCCA GCACATGCAAAGAGGTTTACATTTGCGGTGCGCGTGAATACTACTGATAGAGGATGGACAGATGAATGTGTTGGAGAGCC AATGCCAAGCGTCAAGAAGGCCAAAGACTCAGCTGCTGTTCTTCTCTTAGAGCTACTAAACAAATTATATTCATCGTAG
Protein sequence (LotjaGi1g1v0798000.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MERGTGTVRVPKGDDTATATAGAGGGSYWLDACEDISCDFIDFDAASSIVVSVSDHPDNAASNQDFFGGIDRILDSIKNG AGLPLNNLSNANQGEGGVLVTCSQENHLHLHLHVDAIADETCNKRPRLASYNNDRPYYARLNHRDRCFDTRKRPRDRDNK HCGTGRRDVNVRDQRGYWERDKSGSNDLVFRLGTWEADRHPQDKIPNEVKRETNANLHIKSQEAKDRLPEEKARQYQLDV LQQAKENNTIAFLETGAGKTLIAVLLIKSMQDTLQNQNKKLLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFW DARRWQREFDTKHVLVMTAQILLNILRHSIIKMEEINLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPTVFGMTASPV NLKGVSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEVVVEYDKAASLCYLHEQIKQMEFEVEEAAKSSSRRS KWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWSAYKVAQSFLAALQNDERANFQLDVKFQE SYLSKVISLLKCQLSEGAVSEKNAAEVNPDSGAAHSGSEHEEIEEGELPDGHVVSGGEHVDVIIGAAVADGKVTPKVQAL IKILLKYQNTEDFRAIIFVERVVSALVLPKVFAELPSLSFVKCASLIGHNNSQEMRTYQMQDTIAKFRDGRVTLLVATSV AEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHEAFLRNARNSEETLRKEAIERTDLSHLKDT SRLISVETQPGTVYQVKSTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPEFIMERHEKPDGPTEYSCKLQLPCNAPFEYL EGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILS GKDACKSSKSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFGGSISITESQ LASLKSFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPMVGDKSLDPMNQIDWHLVETITGACAWKNPLQRARPDVYLGTN ERTLGGDKREYGFVKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDTMETQKHNNMNTKGKLMMADACANAEDL VGRIVTAAHSGKRFYVDSIRYDMSAENSFPRKEGYLGPLEYNSYADYYKQKYGVDLIYKQQPLIRGRGVSYCKNLLSPRF EHSEEHEGESEEDHDKTYYVFLPPELCLVHPLPGSLVRGAQRLPSIMRRVESLLLAVELKNMINYPVQALKILEALTAAS CQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALSKGLQSYIQADRFAPSRWAAPGVL PVFDEDTKDGESSIFDQDQSISKTGMMDNSDRFDNEMEDGEIESDSSSYRVLSSKTLADVVEALIGVYYVQGGKNAANHL MKWIGIQVESDPDEMECTRKPFSVPDSIIRSVDFDALEGALNLKFNDKGLLIEAITHASRPSSGVSCYQRLEFVGDAVLD HLITRHLFFSYTDLPPGRLTDLRAAAVNNENFARVAVKHNLHLHLRHGSSALEKQIKEFVKEAQNELSQPGFNSFGLGDC KAPKVLGDIVESIAGAIFLDSGRNTAAVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYRASRIGNLATVEVF IDGVQVGAAQNPQKKMAQKLAARNALAALKEKEVVKTPEKNDENMKKSGNQTYTRQTLNDICLRRNWPMPLYRCVSEGGP AHAKRFTFAVRVNTTDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNKLYSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 185 | 1891 | 1707 | 0.0 | – | |
| PANTHER | 185 | 1891 | 1707 | 0.0 | – | |
| SMART | 229 | 432 | 204 | 1.1E-19 | ||
| CDD | 232 | 431 | 200 | 7.18543E-93 | – | |
| Pfam | 240 | 399 | 160 | 4.3E-14 | ||
| ProSiteProfiles | 240 | 417 | 178 | 19.714 | ||
| SUPERFAMILY | 280 | 767 | 488 | 3.98E-40 | ||
| MobiDBLite | 581 | 610 | 30 | - | – | |
| MobiDBLite | 595 | 610 | 16 | - | – | |
| CDD | 633 | 763 | 131 | 1.00218E-56 | – | |
| Pfam | 636 | 753 | 118 | 3.5E-17 | ||
| ProSiteProfiles | 639 | 800 | 162 | 14.398 | ||
| SMART | 669 | 755 | 87 | 8.7E-11 | ||
| Gene3D | 823 | 927 | 105 | 8.5E-30 | ||
| Pfam | 828 | 916 | 89 | 5.3E-22 | ||
| ProSiteProfiles | 828 | 923 | 96 | 24.136 | ||
| MobiDBLite | 914 | 940 | 27 | - | – | |
| MobiDBLite | 917 | 940 | 24 | - | – | |
| ProSiteProfiles | 1171 | 1311 | 141 | 26.524 | ||
| SMART | 1171 | 1335 | 165 | 2.6E-33 | ||
| Gene3D | 1172 | 1316 | 145 | 1.8E-19 | – | |
| SUPERFAMILY | 1179 | 1311 | 133 | 2.55E-13 | ||
| Pfam | 1184 | 1331 | 148 | 2.4E-24 | ||
| SUPERFAMILY | 1327 | 1530 | 204 | 1.24E-34 | ||
| SMART | 1350 | 1533 | 184 | 6.5E-36 | ||
| CDD | 1352 | 1531 | 180 | 3.04081E-34 | ||
| ProSiteProfiles | 1354 | 1513 | 160 | 25.802 | ||
| Pfam | 1368 | 1513 | 146 | 4.0E-30 | ||
| SUPERFAMILY | 1548 | 1721 | 174 | 5.41E-38 | ||
| Gene3D | 1550 | 1728 | 179 | 2.8E-58 | ||
| ProSiteProfiles | 1554 | 1702 | 149 | 35.475 | ||
| SMART | 1569 | 1725 | 157 | 3.5E-46 | ||
| CDD | 1570 | 1725 | 156 | 1.42393E-43 | ||
| Pfam | 1589 | 1702 | 114 | 1.0E-23 | ||
| ProSitePatterns | 1589 | 1597 | 9 | - | ||
| SUPERFAMILY | 1684 | 1810 | 127 | 2.65E-12 | – | |
| ProSiteProfiles | 1728 | 1791 | 64 | 10.824 | ||
| SMART | 1729 | 1790 | 62 | 3.4E-6 | ||
| Gene3D | 1729 | 1800 | 72 | 7.7E-8 | – | |
| ProSiteProfiles | 1813 | 1888 | 76 | 11.528 | ||
| SMART | 1814 | 1887 | 74 | 6.1E-11 | ||
| Pfam | 1814 | 1886 | 73 | 1.7E-14 | – | |
| SUPERFAMILY | 1817 | 1887 | 71 | 1.22E-11 | – | |
| CDD | 1818 | 1879 | 62 | 7.49306E-12 | ||
| Gene3D | 1819 | 1889 | 71 | 2.4E-22 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Ribonuclease III activity | Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. | ||
| Molecular function | Endoribonuclease activity, producing 5'-phosphomonoesters | Catalysis of the hydrolysis of ester linkages within ribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters. |
Expression pattern of LotjaGi1g1v0798000.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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