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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0141500 |
| Transcript ID | LotjaGi3g1v0141500.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | U5 small nuclear ribonucleoprotein helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9SYP1|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr|A0A0L9UIS3|A0A0L9UIS3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0141500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:18748967..18755959) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCGCATCTCGGCGGTGGCGCGGAGGCGCACGCGCGGTTCAAGCAGTACGAGTACCGCGCCAACTCCAGCCTCGTCCT CACCACCGACTCTCGCCCCCGCGACACCCACGAACCCACCGGGGAGCCCGAGTCCCTCTGGGGCAAAATCGACCCCAAAA GCTTCGGAGATCGCGCCTTCCGCGGCCGCCCCCCTGAGCTCGACGAGAAGGCCGCCGCCGCCGCTCTCAAGAAGAGTAAG AAGAAGAAGGACCGCGACCCTGACGCCGCCGCGTCTTCCCGCCGCGCGAAGCGCCGGCGCTTACAGGAGGAGAGTGTTCT CACTGCCTCTGATGAGGGGGTTTACCAGCCCAAGACTAAGGAGACCCGTGCCGCGTACGAGGCCATGTTGAGCGTTATTC AGCAGCAGCTTGGCGGGCAGCCGCTGAGTATAGTCAGCGGCGCCGCCGATGAGATCCTTGCTGTGTTGAAGAACGATGTG TTTAAGAATTCGGAGAAGAAGAAGGAGATTGAGAAGCTGCTTAATCATATCCCTGACAATGTTTTTGACCAGATGGTGTC TATTGGTAAGCTGATTACTGATTTTCAGGAGGCCGGGGATGCGCCCGCGGCGGCTGATGGGGATGGGGGGCTTGATGATG ATGTTGGTGTGGCGGTTGAGTTTGAAGAGAATGAGGAGGATGATGATGAGAGTGATCTTGATGTGGTGCAGGAAGAGGAA GAGGATGAGGATGATCTTGCTGAACCGAACGCGTCGTCGGGTATGCAAATGGGTGGTGGGATTGATGATGAGGATATGGA GGAAGCTAATGAAGGGATGAACCTCAATGTGCAGGATATTGATGCTTATTGGCTTCAGAGGAAAATCTCTCAGGCGTTTG AGCAGCAGATTGACCCGCAGCAATGCCAGAAGCTTGCTGAGGAAGTGCTTAAGATTCTGGCTGTGGCTGATGACAGGGAA GTGGAGAACAAGTTGTTGTTTCACCTGGAGTTTGACAAGTTCAGCCTGATTAAGTTTCTGTTGCGGAATAGGCTGAAGAT TGTGTGGTGTACCCGGTTAGCGAGGGCGCAGGATCAGGAAGAGAGGGAGAAGATTGAGGAGGAGATGAAGGGTACGGAGT TGCAGCCAATTTTGGAGCAGCTGCATGCTACTAGGGCCTCTGCTAAGGAGAGGCAGAAGAACTTGGAGAAGAGTATAAGG GAAGAGGCTCGTAGGTTGAAGGATGATACTACTGGTACTGGTAATGGAGATGGGGATAGGGACAGGGAGAAGGATAGAAG TAGGAGTAGGGGAGTTTCTGAGAGAGATGCAGAGAGTGGGTGGTTGAAGGGTCAGCGCCAGATGCTTGATTTTGATAGCC TTGCATTTCATCAAGGTGGGTTCTTGATGGCTAACAGGTGTGATCTGCCTGATGGGTCTTATAGGCATCTAAGCAAGGGT TATGAAGAAATCCACGTGCCCGCCTTGAAGGCTAAACCCCTTGATTCTAATGAGAAGCTTGTAAAAATATCTTCTATACC TGATTGGGCACAACCCGCCTTTAAAGGAATGACGCAGCTGAATAGGGTTCAGAGCAAGGTCTATGAGACGGCACTCTTCA GGCCTGATAATCTTCTGCTTTGTGCTCCAACTGGGGCTGGAAAAACTAATGTTGCAGTTCTCACGATGCTTCAGCAAATT GCGAGGCACAGGAATCCTGAGGATGGTTCCATTGACCACAGTGCTTATAAGATTGTTTATGTTGCGCCTATGAAAGCTCT CGTGGCTGAGGTTGTAGGGAATTTGTCCAATCGTTTGCAGGAATATGGTGTTACAGTTAGGGAGCTCAGTGGAGACCAGT CTCTGACCCGTCGGCAAATAGAAGAGACTCAAATTATTGTGACAACTCCTGAGAAGTGGGATATTATCACTCGAAAGTCA GGAGATCGAACTTACACGCAGCTTGTGAAGCTTCTTATCATTGATGAGATTCATCTTCTTCACGATAACAGAGGGCCTGT TCTTGAAAGTATTGTTGCTAGAACAGTTAGGCAGATAGAAACCACGAAGGACTATATTCGGTTGGTGGGGTTGTCTGCTA CCCTTCCTAATTATGAAGATGTGGCACTGTTTTTGCGTGTTGATCTTAACAAGGGGTTGTTTTATTTTGATAATAGTTAT AGGCCTGTTCCTCTTTCTCAACAGTATATTGGAATCACAGTTAAGAAGCCGCTTCAGAGGTTCCAGTTGATGAATGATAT CTGTTACGAGAAAGTTTTAGGTGTAGCTGGAAAGCATCAGGTTCTTATCTTTGTACATTCAAGGAAAGAAACTGCTAAAA CTGCTAGAGCCATCAGAGATACTGCACTTGCAAATGATACTCTTGGTAGGTTCCTTAAAGAAGATAGTGCTAGTCGCGAG ATTCTTCACTCTCATACTGAACTTGTGAGGAGCAATGATCTTAAAGATCTTCTGCCCTATGGTTTTGCAATTCATCATGC TGGTATGAACAGGGCAGATCGCAATCTTGTTGAGGATCTCTTTGCTGATGGTCATGTGCAAGTTTTGGTATCCACTGCGA CCCTTGCTTGGGGTGTGAATCTCCCAGCTCATACAGTGATAATAAAAGGGACACAGATATACAATCCTGAAAAGGGTGCC TGGACTGAACTTAGTCCTCTTGATGTGATGCAGATGTTGGGTCGTGCTGGAAGGCCCCAGTATGACTCATATGGTGAAGG AATAATTCTTACTGGCCATAGTGAGTTGCAGTATTACCTCTCTCTTATGAACCAACAACTTCCTATTGAGAGCCAGTTTG TGTCCAAGCTGGCCGATCAGCTGAATGCAGAAATTGTTCTTGGTACTGTTCAAAATGCCAGGGAAGCCTGTAATTGGATT GGATACACTTACTTGTATGTCCGTATGTTAAGGAATCCTTCTCTATATGGTTTAGCACCAGATGTCCTGAAGAGAGATAT AACATTGGAGGAGAGAAGAGCTGATTTGGTAAGCATTTCTATCACCTAGTTTATCATCCTGTTATTACCTGAACTAAACT GATATCTGTTAGGTTTATTTCCTTTCTGTCTTCCTGGTTGCATTTGTGCTTGTCGTTGCTATGGTTTTTTGTACAATTGC ATGAGAAGGGAGCTGAAGCTGTCACTGTAAAAATTACCCATCCTAGTTGGAGGAGATAGGCTCTTGTTCCTTTTTCTTCA GTTTGATTTTCTCCTATGTGTATCTTCTTTCAAATAATATTCGATGTAGAAATTTCTGGATATACATTGTCCGTGCGCTT TAACGATTTTATGGCTAATACTGATCTCATTGAAATCTTGCAGATTCATACAGCAGCAACCATATTAGATAAAAATAATT TGGTGAAGTATGATAGGAAGAGCGGATATTTTCAGGTCACCGACTTGGGTCGAATTGCAAGCTACTACTACATAACGCAT GGAACCATATCCACATATAATGAGCACTTAAAGCCTACAATGGGGGATATAGAGCTTTGTCGATTGTTCTCATTGAGTGA AGAATTCAAGTATGTGACAGTAAGACAGGATGAGAAGATGGAGCTAGCAAAGCTTTTGGAACGAGTTCCCATTCCCATCA AGGAAAGTCTGGAAGAGCCAAGTGCCAAGATCAATGTTTTGCTGCAAGCATACATTTCACAATTAAAGCTTGAAGGGCTA TCACTGACATCTGATATGGTCTTTATAACTCAGGTTAGACTTCATTCCTTACCATTGTTAGAAAATGAATGGAAATGGTG CCTTTCATATATTGTGTTTCTACTGATTCATGTGCTTTATTTCTCTCATGTAGAGTGCTGGACGCCTTTTGCGGGCTCTT TTTGAGATTGTCCTGAAACGTGGCTGGGCACAGTTGGCTGAAAAGGCTTTGAATTTATGCAAGATGGTGACCAAGAGGAT GTGGAGTGTCCAAACACCTCTTCGTCAGTTCAATGGAATCCCAAGTGATGTATTAACGAAGTTGGAAAAGAAAGATTTGG CCTGGGAAAGGTATTATGACCTATCACCACAAGAGATAAGTGAACTCATTCGTGCAACCAAGATGGGAAGGACACTTCAT AAATTTATCCACCAATTTCCAAAACTGAACCTTGCAGCACATGTGCAGCCAATTACTCGCACGGTTTTGGGGGTTGAACT CACAATAACTCCGGATTTTGCATGGGATGACAATATCCATGGATATGTTGAGCCATTCTGGGTGATTGTGGAGGATAATG ATGGTGAATATATTCTTCATCATGAGTATTTTTTGCTGAAAAAGCAATATATTGATGAGGATCATACTCTGAATTTCACA GTGCCAATATACGAGCCTCTTCCTCCTCAATACTTTATCTGTGTTGTTTCAGATAAATGGCTTGGATCACAAACTGTTTT ACCTGTTTCATTCAGGCATCTAATCTTACCTGAAAAGTATCCTCCACCAACTGAGCTATTGGATCTGCAGCCACTGCCCG TAACTGCCTTACGAAATCCATCATATGAAGCTCTTTATCAGGTCTTTAAGCATTTTAATCCTGTTCAGACACAAGTCTTC ACAGTTCTGTATAATTCTGATGACAATGTCTTAGTTGCTGCTCCAACAGGGAGTGGTAAGACTATATGTGCAGAATTTGC TATATTGAGGAATCATCAAAAAGTGCCTGATAGTGTTATGCGTGTTGTTTATATTGCTCCCATTGAAGCTCTTGCCAAGG AACGGTATCGTGACTGGGAGAGGAAATTTGGTGGTGGTCTTAAATTAAGGGTAGTTGAATTGACTGGAGAAACAGCGACA GACTTGAAACTACTTGAGAAGAGTCAGATTATTATTAGCACTCCGGAGAAATGGGATGCTCTATCCCGCCGCTGGAAACA GAGGAAACAAGTTCAACAAGTTAGTCTTTTTATCATTGATGAGCTCCACTTAATTGGGGGTCAAGGAGGTCCTGTTTTAG AGGTTATTGTTTCCAGGATGAGATATATTGCTAGTCAGGTTGAGAACAAAATTCGTATTGTGGCTCTGTCAACCTCACTT GCGAATGCAAAGGATCTGGGAGAATGGATTGGAGCTACCTCCCATGGCCTTTTCAATTTCCCCCCTGGTGTTCGTCCTGT GCCTTTGGAAATACACATTCAGGGTATAGATATTGCCAATTTTGAGGCAAGGATGCAGGCAATGACAAAACCAACTTACA CTGCAATTGTTCAACATGCGAAGAATGGTAAACCTGCTCTTGTGTTTGTACCTACAAGGAAACATGTTCGGCTGACGGCT GTGGATCTGATAACTTACTCAGGTGCTGACAGTGGAGAGAAACCGTTTTTATTGCGGTCCATTGAAGAAATTGATCCTTT TCTTAACAAGATTAGTGATGAAATGTTGAAAGTCACTTTACGTGAAGGCGTGGGTTACTTGCATGAGGGCTTGAACAGTC TTGATCAAGACATTGTAACACAGCTATTTGAAGCTGGCTGGATTCAGGTCTGTGTTTTAAGCAGTTCCATGTGTTGGGGA TTGGCATTATCTGCTCATTTGGTAGTCGTGATGGGCACACAATACTATGATGGGCGGGAGAATGCACAGTCAGATTACCC TGTTACTGATCTTCTGCAGATGATGGGTCATGCCAGCCGACCTCTGGTGGATAATTCTGGAAAATGTGTCATCTTGTGCC ATGCACCTCGTAAGGAGTACTACAAGAAGTTCTTGTATGAAGCATTCCCGGTTGAAAGTCATCTTCATCACTTCCTACAT GATAACTTGAATGCTGAAATTGTTGCTGGAATTGTTGAAAACAAGCAAGATGCTGTAGATTATCTTACATGGACATTTAT GTACAGGCGGCTAACCCAGAATCCCAACTACTATAATTTACAAGGAGTTAGTCACAGGCATCTATCTGATCACCTCTCAG AGATGGTGGAGAATACATTGAGTGATTTAGAAGCGAGCAAGTGTGTTGCTATTGAGGATGATATGGACCTTTCTCCTCTC AATCTAGGAATGATAGCATCATATTATTACATCAGTTACACAACGATTGAAAGGTTTTCATCATCTTTGACCTCAAAAAC AAAAATGAAGGGTCTTTTGGAGGTTCTATCCTCAGCTTCAGAGTATGCTCAGCTTCCCATACGACCTGGGGAGGAAGAGG TGGTTCGTAGGTTAATTAATCACCAGAGGTTTTCCTTTGAAAATCCCAAAGTTACAGACCCACATGTTAAAGCTAATGCT TTGCTTCAGGCCCATTTCTCTAGGCAATCTGTTGGTGGGAACCTTTCATTGGACCAGAGAGAGGTGCTTCTTTCTTCAAG TAGACTTCTTCAGGCAATGGTTGATGTTATATCGAGCAGTGGTTGGCTCAGCCTGGCTCTTCTTGCTATGGAAGTTAGTC AAATGGTGACACAAGGGATGTGGGAACGTGACTCAATGCTACTGCAGCTTCCTCATTTTACGAAGGATTTGGCTAAGAGA TGCCAGGAGAACCCCGGGAAGAGTGTTGAAACTGTGTTTGATTTATTAGAGATGGAGGATGATGAGAGGCGTGAATTGTT GGGCATGTCAGATTCACAGTTGTTGGATATTGCTCGATTTTGCAACCGTTTTCCTAATATTGATTTGTCATATGACGTCC TGGACAGTGACAATGTGCGGGCTGGGGAGGATATCACAATACAGGTCACTCTTGAGCGGGATCTCGAGGGTAAGACAGAA GTAGGACCTGTTGATGCTCCCAGGTATCCAAAAGCAAAGGAGGAAGGATGGTGGCTTGTTGTTGGTGATACCAGAAACAA CTTGTTGCTTGCCATTAAACGTGTTTCCCTGCAACGGAAGTTGAAAGCCAAACTAGAGTTTGCTGCTCCAGCTGATGCTG GAAAGAAATCCTACGTGCTTTATTTCATGTGTGATTCATACATGGGGTGTGATCAGGAATATGGTTTCACTGTTGATGTT AAGGAAGCTGATGAAGATAGTGGCAAAGATTGA
CDS sequence (LotjaGi3g1v0141500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGCATCTCGGCGGTGGCGCGGAGGCGCACGCGCGGTTCAAGCAGTACGAGTACCGCGCCAACTCCAGCCTCGTCCT CACCACCGACTCTCGCCCCCGCGACACCCACGAACCCACCGGGGAGCCCGAGTCCCTCTGGGGCAAAATCGACCCCAAAA GCTTCGGAGATCGCGCCTTCCGCGGCCGCCCCCCTGAGCTCGACGAGAAGGCCGCCGCCGCCGCTCTCAAGAAGAGTAAG AAGAAGAAGGACCGCGACCCTGACGCCGCCGCGTCTTCCCGCCGCGCGAAGCGCCGGCGCTTACAGGAGGAGAGTGTTCT CACTGCCTCTGATGAGGGGGTTTACCAGCCCAAGACTAAGGAGACCCGTGCCGCGTACGAGGCCATGTTGAGCGTTATTC AGCAGCAGCTTGGCGGGCAGCCGCTGAGTATAGTCAGCGGCGCCGCCGATGAGATCCTTGCTGTGTTGAAGAACGATGTG TTTAAGAATTCGGAGAAGAAGAAGGAGATTGAGAAGCTGCTTAATCATATCCCTGACAATGTTTTTGACCAGATGGTGTC TATTGGTAAGCTGATTACTGATTTTCAGGAGGCCGGGGATGCGCCCGCGGCGGCTGATGGGGATGGGGGGCTTGATGATG ATGTTGGTGTGGCGGTTGAGTTTGAAGAGAATGAGGAGGATGATGATGAGAGTGATCTTGATGTGGTGCAGGAAGAGGAA GAGGATGAGGATGATCTTGCTGAACCGAACGCGTCGTCGGGTATGCAAATGGGTGGTGGGATTGATGATGAGGATATGGA GGAAGCTAATGAAGGGATGAACCTCAATGTGCAGGATATTGATGCTTATTGGCTTCAGAGGAAAATCTCTCAGGCGTTTG AGCAGCAGATTGACCCGCAGCAATGCCAGAAGCTTGCTGAGGAAGTGCTTAAGATTCTGGCTGTGGCTGATGACAGGGAA GTGGAGAACAAGTTGTTGTTTCACCTGGAGTTTGACAAGTTCAGCCTGATTAAGTTTCTGTTGCGGAATAGGCTGAAGAT TGTGTGGTGTACCCGGTTAGCGAGGGCGCAGGATCAGGAAGAGAGGGAGAAGATTGAGGAGGAGATGAAGGGTACGGAGT TGCAGCCAATTTTGGAGCAGCTGCATGCTACTAGGGCCTCTGCTAAGGAGAGGCAGAAGAACTTGGAGAAGAGTATAAGG GAAGAGGCTCGTAGGTTGAAGGATGATACTACTGGTACTGGTAATGGAGATGGGGATAGGGACAGGGAGAAGGATAGAAG TAGGAGTAGGGGAGTTTCTGAGAGAGATGCAGAGAGTGGGTGGTTGAAGGGTCAGCGCCAGATGCTTGATTTTGATAGCC TTGCATTTCATCAAGGTGGGTTCTTGATGGCTAACAGGTGTGATCTGCCTGATGGGTCTTATAGGCATCTAAGCAAGGGT TATGAAGAAATCCACGTGCCCGCCTTGAAGGCTAAACCCCTTGATTCTAATGAGAAGCTTGTAAAAATATCTTCTATACC TGATTGGGCACAACCCGCCTTTAAAGGAATGACGCAGCTGAATAGGGTTCAGAGCAAGGTCTATGAGACGGCACTCTTCA GGCCTGATAATCTTCTGCTTTGTGCTCCAACTGGGGCTGGAAAAACTAATGTTGCAGTTCTCACGATGCTTCAGCAAATT GCGAGGCACAGGAATCCTGAGGATGGTTCCATTGACCACAGTGCTTATAAGATTGTTTATGTTGCGCCTATGAAAGCTCT CGTGGCTGAGGTTGTAGGGAATTTGTCCAATCGTTTGCAGGAATATGGTGTTACAGTTAGGGAGCTCAGTGGAGACCAGT CTCTGACCCGTCGGCAAATAGAAGAGACTCAAATTATTGTGACAACTCCTGAGAAGTGGGATATTATCACTCGAAAGTCA GGAGATCGAACTTACACGCAGCTTGTGAAGCTTCTTATCATTGATGAGATTCATCTTCTTCACGATAACAGAGGGCCTGT TCTTGAAAGTATTGTTGCTAGAACAGTTAGGCAGATAGAAACCACGAAGGACTATATTCGGTTGGTGGGGTTGTCTGCTA CCCTTCCTAATTATGAAGATGTGGCACTGTTTTTGCGTGTTGATCTTAACAAGGGGTTGTTTTATTTTGATAATAGTTAT AGGCCTGTTCCTCTTTCTCAACAGTATATTGGAATCACAGTTAAGAAGCCGCTTCAGAGGTTCCAGTTGATGAATGATAT CTGTTACGAGAAAGTTTTAGGTGTAGCTGGAAAGCATCAGGTTCTTATCTTTGTACATTCAAGGAAAGAAACTGCTAAAA CTGCTAGAGCCATCAGAGATACTGCACTTGCAAATGATACTCTTGGTAGGTTCCTTAAAGAAGATAGTGCTAGTCGCGAG ATTCTTCACTCTCATACTGAACTTGTGAGGAGCAATGATCTTAAAGATCTTCTGCCCTATGGTTTTGCAATTCATCATGC TGGTATGAACAGGGCAGATCGCAATCTTGTTGAGGATCTCTTTGCTGATGGTCATGTGCAAGTTTTGGTATCCACTGCGA CCCTTGCTTGGGGTGTGAATCTCCCAGCTCATACAGTGATAATAAAAGGGACACAGATATACAATCCTGAAAAGGGTGCC TGGACTGAACTTAGTCCTCTTGATGTGATGCAGATGTTGGGTCGTGCTGGAAGGCCCCAGTATGACTCATATGGTGAAGG AATAATTCTTACTGGCCATAGTGAGTTGCAGTATTACCTCTCTCTTATGAACCAACAACTTCCTATTGAGAGCCAGTTTG TGTCCAAGCTGGCCGATCAGCTGAATGCAGAAATTGTTCTTGGTACTGTTCAAAATGCCAGGGAAGCCTGTAATTGGATT GGATACACTTACTTGTATGTCCGTATGTTAAGGAATCCTTCTCTATATGGTTTAGCACCAGATGTCCTGAAGAGAGATAT AACATTGGAGGAGAGAAGAGCTGATTTGATTCATACAGCAGCAACCATATTAGATAAAAATAATTTGGTGAAGTATGATA GGAAGAGCGGATATTTTCAGGTCACCGACTTGGGTCGAATTGCAAGCTACTACTACATAACGCATGGAACCATATCCACA TATAATGAGCACTTAAAGCCTACAATGGGGGATATAGAGCTTTGTCGATTGTTCTCATTGAGTGAAGAATTCAAGTATGT GACAGTAAGACAGGATGAGAAGATGGAGCTAGCAAAGCTTTTGGAACGAGTTCCCATTCCCATCAAGGAAAGTCTGGAAG AGCCAAGTGCCAAGATCAATGTTTTGCTGCAAGCATACATTTCACAATTAAAGCTTGAAGGGCTATCACTGACATCTGAT ATGGTCTTTATAACTCAGAGTGCTGGACGCCTTTTGCGGGCTCTTTTTGAGATTGTCCTGAAACGTGGCTGGGCACAGTT GGCTGAAAAGGCTTTGAATTTATGCAAGATGGTGACCAAGAGGATGTGGAGTGTCCAAACACCTCTTCGTCAGTTCAATG GAATCCCAAGTGATGTATTAACGAAGTTGGAAAAGAAAGATTTGGCCTGGGAAAGGTATTATGACCTATCACCACAAGAG ATAAGTGAACTCATTCGTGCAACCAAGATGGGAAGGACACTTCATAAATTTATCCACCAATTTCCAAAACTGAACCTTGC AGCACATGTGCAGCCAATTACTCGCACGGTTTTGGGGGTTGAACTCACAATAACTCCGGATTTTGCATGGGATGACAATA TCCATGGATATGTTGAGCCATTCTGGGTGATTGTGGAGGATAATGATGGTGAATATATTCTTCATCATGAGTATTTTTTG CTGAAAAAGCAATATATTGATGAGGATCATACTCTGAATTTCACAGTGCCAATATACGAGCCTCTTCCTCCTCAATACTT TATCTGTGTTGTTTCAGATAAATGGCTTGGATCACAAACTGTTTTACCTGTTTCATTCAGGCATCTAATCTTACCTGAAA AGTATCCTCCACCAACTGAGCTATTGGATCTGCAGCCACTGCCCGTAACTGCCTTACGAAATCCATCATATGAAGCTCTT TATCAGGTCTTTAAGCATTTTAATCCTGTTCAGACACAAGTCTTCACAGTTCTGTATAATTCTGATGACAATGTCTTAGT TGCTGCTCCAACAGGGAGTGGTAAGACTATATGTGCAGAATTTGCTATATTGAGGAATCATCAAAAAGTGCCTGATAGTG TTATGCGTGTTGTTTATATTGCTCCCATTGAAGCTCTTGCCAAGGAACGGTATCGTGACTGGGAGAGGAAATTTGGTGGT GGTCTTAAATTAAGGGTAGTTGAATTGACTGGAGAAACAGCGACAGACTTGAAACTACTTGAGAAGAGTCAGATTATTAT TAGCACTCCGGAGAAATGGGATGCTCTATCCCGCCGCTGGAAACAGAGGAAACAAGTTCAACAAGTTAGTCTTTTTATCA TTGATGAGCTCCACTTAATTGGGGGTCAAGGAGGTCCTGTTTTAGAGGTTATTGTTTCCAGGATGAGATATATTGCTAGT CAGGTTGAGAACAAAATTCGTATTGTGGCTCTGTCAACCTCACTTGCGAATGCAAAGGATCTGGGAGAATGGATTGGAGC TACCTCCCATGGCCTTTTCAATTTCCCCCCTGGTGTTCGTCCTGTGCCTTTGGAAATACACATTCAGGGTATAGATATTG CCAATTTTGAGGCAAGGATGCAGGCAATGACAAAACCAACTTACACTGCAATTGTTCAACATGCGAAGAATGGTAAACCT GCTCTTGTGTTTGTACCTACAAGGAAACATGTTCGGCTGACGGCTGTGGATCTGATAACTTACTCAGGTGCTGACAGTGG AGAGAAACCGTTTTTATTGCGGTCCATTGAAGAAATTGATCCTTTTCTTAACAAGATTAGTGATGAAATGTTGAAAGTCA CTTTACGTGAAGGCGTGGGTTACTTGCATGAGGGCTTGAACAGTCTTGATCAAGACATTGTAACACAGCTATTTGAAGCT GGCTGGATTCAGGTCTGTGTTTTAAGCAGTTCCATGTGTTGGGGATTGGCATTATCTGCTCATTTGGTAGTCGTGATGGG CACACAATACTATGATGGGCGGGAGAATGCACAGTCAGATTACCCTGTTACTGATCTTCTGCAGATGATGGGTCATGCCA GCCGACCTCTGGTGGATAATTCTGGAAAATGTGTCATCTTGTGCCATGCACCTCGTAAGGAGTACTACAAGAAGTTCTTG TATGAAGCATTCCCGGTTGAAAGTCATCTTCATCACTTCCTACATGATAACTTGAATGCTGAAATTGTTGCTGGAATTGT TGAAAACAAGCAAGATGCTGTAGATTATCTTACATGGACATTTATGTACAGGCGGCTAACCCAGAATCCCAACTACTATA ATTTACAAGGAGTTAGTCACAGGCATCTATCTGATCACCTCTCAGAGATGGTGGAGAATACATTGAGTGATTTAGAAGCG AGCAAGTGTGTTGCTATTGAGGATGATATGGACCTTTCTCCTCTCAATCTAGGAATGATAGCATCATATTATTACATCAG TTACACAACGATTGAAAGGTTTTCATCATCTTTGACCTCAAAAACAAAAATGAAGGGTCTTTTGGAGGTTCTATCCTCAG CTTCAGAGTATGCTCAGCTTCCCATACGACCTGGGGAGGAAGAGGTGGTTCGTAGGTTAATTAATCACCAGAGGTTTTCC TTTGAAAATCCCAAAGTTACAGACCCACATGTTAAAGCTAATGCTTTGCTTCAGGCCCATTTCTCTAGGCAATCTGTTGG TGGGAACCTTTCATTGGACCAGAGAGAGGTGCTTCTTTCTTCAAGTAGACTTCTTCAGGCAATGGTTGATGTTATATCGA GCAGTGGTTGGCTCAGCCTGGCTCTTCTTGCTATGGAAGTTAGTCAAATGGTGACACAAGGGATGTGGGAACGTGACTCA ATGCTACTGCAGCTTCCTCATTTTACGAAGGATTTGGCTAAGAGATGCCAGGAGAACCCCGGGAAGAGTGTTGAAACTGT GTTTGATTTATTAGAGATGGAGGATGATGAGAGGCGTGAATTGTTGGGCATGTCAGATTCACAGTTGTTGGATATTGCTC GATTTTGCAACCGTTTTCCTAATATTGATTTGTCATATGACGTCCTGGACAGTGACAATGTGCGGGCTGGGGAGGATATC ACAATACAGGTCACTCTTGAGCGGGATCTCGAGGGTAAGACAGAAGTAGGACCTGTTGATGCTCCCAGGTATCCAAAAGC AAAGGAGGAAGGATGGTGGCTTGTTGTTGGTGATACCAGAAACAACTTGTTGCTTGCCATTAAACGTGTTTCCCTGCAAC GGAAGTTGAAAGCCAAACTAGAGTTTGCTGCTCCAGCTGATGCTGGAAAGAAATCCTACGTGCTTTATTTCATGTGTGAT TCATACATGGGGTGTGATCAGGAATATGGTTTCACTGTTGATGTTAAGGAAGCTGATGAAGATAGTGGCAAAGATTGA
Protein sequence (LotjaGi3g1v0141500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKSFGDRAFRGRPPELDEKAAAAALKKSK KKKDRDPDAAASSRRAKRRRLQEESVLTASDEGVYQPKTKETRAAYEAMLSVIQQQLGGQPLSIVSGAADEILAVLKNDV FKNSEKKKEIEKLLNHIPDNVFDQMVSIGKLITDFQEAGDAPAAADGDGGLDDDVGVAVEFEENEEDDDESDLDVVQEEE EDEDDLAEPNASSGMQMGGGIDDEDMEEANEGMNLNVQDIDAYWLQRKISQAFEQQIDPQQCQKLAEEVLKILAVADDRE VENKLLFHLEFDKFSLIKFLLRNRLKIVWCTRLARAQDQEEREKIEEEMKGTELQPILEQLHATRASAKERQKNLEKSIR EEARRLKDDTTGTGNGDGDRDREKDRSRSRGVSERDAESGWLKGQRQMLDFDSLAFHQGGFLMANRCDLPDGSYRHLSKG YEEIHVPALKAKPLDSNEKLVKISSIPDWAQPAFKGMTQLNRVQSKVYETALFRPDNLLLCAPTGAGKTNVAVLTMLQQI ARHRNPEDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQEYGVTVRELSGDQSLTRRQIEETQIIVTTPEKWDIITRKS GDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKDYIRLVGLSATLPNYEDVALFLRVDLNKGLFYFDNSY RPVPLSQQYIGITVKKPLQRFQLMNDICYEKVLGVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASRE ILHSHTELVRSNDLKDLLPYGFAIHHAGMNRADRNLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGA WTELSPLDVMQMLGRAGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWI GYTYLYVRMLRNPSLYGLAPDVLKRDITLEERRADLIHTAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTIST YNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSD MVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWSVQTPLRQFNGIPSDVLTKLEKKDLAWERYYDLSPQE ISELIRATKMGRTLHKFIHQFPKLNLAAHVQPITRTVLGVELTITPDFAWDDNIHGYVEPFWVIVEDNDGEYILHHEYFL LKKQYIDEDHTLNFTVPIYEPLPPQYFICVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL YQVFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQKVPDSVMRVVYIAPIEALAKERYRDWERKFGG GLKLRVVELTGETATDLKLLEKSQIIISTPEKWDALSRRWKQRKQVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIAS QVENKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGIDIANFEARMQAMTKPTYTAIVQHAKNGKP ALVFVPTRKHVRLTAVDLITYSGADSGEKPFLLRSIEEIDPFLNKISDEMLKVTLREGVGYLHEGLNSLDQDIVTQLFEA GWIQVCVLSSSMCWGLALSAHLVVVMGTQYYDGRENAQSDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFL YEAFPVESHLHHFLHDNLNAEIVAGIVENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDLEA SKCVAIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEVLSSASEYAQLPIRPGEEEVVRRLINHQRFS FENPKVTDPHVKANALLQAHFSRQSVGGNLSLDQREVLLSSSRLLQAMVDVISSSGWLSLALLAMEVSQMVTQGMWERDS MLLQLPHFTKDLAKRCQENPGKSVETVFDLLEMEDDERRELLGMSDSQLLDIARFCNRFPNIDLSYDVLDSDNVRAGEDI TIQVTLERDLEGKTEVGPVDAPRYPKAKEEGWWLVVGDTRNNLLLAIKRVSLQRKLKAKLEFAAPADAGKKSYVLYFMCD SYMGCDQEYGFTVDVKEADEDSGKD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 7 | 2185 | 2179 | 0.0 | – | |
| MobiDBLite | 24 | 108 | 85 | - | – | |
| MobiDBLite | 54 | 106 | 53 | - | – | |
| PANTHER | 79 | 1410 | 1332 | 0.0 | – | |
| PANTHER | 79 | 1410 | 1332 | 0.0 | – | |
| Coils | 219 | 239 | 21 | - | – | |
| MobiDBLite | 221 | 248 | 28 | - | – | |
| MobiDBLite | 221 | 266 | 46 | - | – | |
| Pfam | 274 | 381 | 108 | 1.4E-36 | ||
| Coils | 355 | 375 | 21 | - | – | |
| Coils | 378 | 409 | 32 | - | – | |
| MobiDBLite | 389 | 441 | 53 | - | – | |
| SUPERFAMILY | 466 | 706 | 241 | 5.63E-42 | ||
| CDD | 503 | 717 | 215 | 4.01998E-139 | – | |
| Gene3D | 511 | 721 | 211 | 7.5E-178 | – | |
| SMART | 516 | 729 | 214 | 7.0E-31 | ||
| Pfam | 522 | 698 | 177 | 1.9E-26 | ||
| ProSiteProfiles | 529 | 713 | 185 | 22.204 | ||
| SMART | 534 | 717 | 184 | 0.0011 | ||
| SUPERFAMILY | 716 | 928 | 213 | 7.14E-47 | ||
| CDD | 721 | 911 | 191 | 3.95403E-66 | – | |
| Gene3D | 722 | 923 | 202 | 7.5E-178 | – | |
| ProSiteProfiles | 739 | 941 | 203 | 11.575 | ||
| Pfam | 758 | 898 | 141 | 1.3E-7 | ||
| SMART | 812 | 900 | 89 | 2.0E-18 | ||
| SUPERFAMILY | 928 | 1033 | 106 | 4.9E-8 | ||
| Gene3D | 930 | 1021 | 92 | 2.0E-35 | – | |
| SMART | 1021 | 1326 | 306 | 2.5E-124 | ||
| Pfam | 1022 | 1324 | 303 | 7.3E-92 | ||
| Gene3D | 1022 | 1163 | 142 | 2.5E-58 | – | |
| SUPERFAMILY | 1049 | 1222 | 174 | 1.94E-49 | – | |
| Gene3D | 1165 | 1220 | 56 | 2.4E-25 | – | |
| Gene3D | 1221 | 1329 | 109 | 1.2E-47 | ||
| SUPERFAMILY | 1252 | 1553 | 302 | 2.36E-50 | ||
| Gene3D | 1330 | 1560 | 231 | 6.4E-92 | – | |
| SMART | 1363 | 1569 | 207 | 3.0E-24 | ||
| CDD | 1364 | 1555 | 192 | 1.17033E-115 | – | |
| Pfam | 1369 | 1537 | 169 | 1.5E-24 | ||
| ProSiteProfiles | 1376 | 1553 | 178 | 21.147 | ||
| SMART | 1381 | 1574 | 194 | 1.2 | ||
| PANTHER | 1413 | 1514 | 102 | 0.0 | – | |
| PANTHER | 1413 | 1514 | 102 | 0.0 | – | |
| PANTHER | 1517 | 2170 | 654 | 0.0 | – | |
| PANTHER | 1517 | 2170 | 654 | 0.0 | – | |
| SUPERFAMILY | 1555 | 1765 | 211 | 4.28E-35 | ||
| CDD | 1560 | 1749 | 190 | 7.57549E-36 | – | |
| Gene3D | 1562 | 1767 | 206 | 9.0E-61 | – | |
| ProSiteProfiles | 1614 | 1794 | 181 | 7.601 | ||
| SMART | 1649 | 1737 | 89 | 0.0078 | ||
| SUPERFAMILY | 1765 | 1866 | 102 | 5.71E-9 | ||
| Gene3D | 1768 | 1854 | 87 | 9.5E-38 | – | |
| Pfam | 1854 | 2171 | 318 | 6.9E-75 | ||
| SMART | 1854 | 2173 | 320 | 3.2E-107 | ||
| Gene3D | 1858 | 1998 | 141 | 7.9E-49 | – | |
| SUPERFAMILY | 1883 | 2060 | 178 | 3.14E-53 | – | |
| Gene3D | 1999 | 2059 | 61 | 3.5E-26 | – | |
| Gene3D | 2060 | 2185 | 126 | 1.3E-44 | ||
| SUPERFAMILY | 2061 | 2177 | 117 | 5.6E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi3g1v0141500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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