Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002048
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 472 results. Now displaying 6 of 10 with 50 rows per page. This search has taken 5.653s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. Calcium-binding EF-hand protein; TAIR: AT4G38810.2 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q5XHA0|SCMC1_XENTR Calcium-binding mitochondrial carrier protein SCaMC-1; TrEMBL-Plants: tr|K7KHF8|K7KHF8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0560900 LjG1.1_chr1 109295386 109300400 -
n.a. Calcium-binding EF hand protein; TAIR: AT1G20760.1 Calcium-binding EF hand family protein; Swiss-Prot: sp|B3LF48|EHD2_ARATH EH domain-containing protein 2; TrEMBL-Plants: tr|A0A0B2QIP4|A0A0B2QIP4_GLYSO Putative calcium-binding protein; Found in the gene: LotjaGi1g1v0567200 LjG1.1_chr1 110055490 110071726 +
n.a. Calcium-binding EF-hand protein; TAIR: AT2G44310.1 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q6DN52|CBPL_DICDI Calcium-binding protein L; TrEMBL-Plants: tr|A0A151S7P0|A0A151S7P0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0581100 LjG1.1_chr1 112044660 112045087 -
n.a. Calcium-binding EF-hand protein; TAIR: AT2G44310.1 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q6DN52|CBPL_DICDI Calcium-binding protein L; TrEMBL-Plants: tr|A0A151S7P0|A0A151S7P0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0581100 LjG1.1_chr1 112044660 112045295 -
n.a. Respiratory burst oxidase-like protein; TAIR: AT5G60010.1 ferric reductase-like transmembrane component family protein; Swiss-Prot: sp|Q9FJD6|RBOHH_ARATH Putative respiratory burst oxidase homolog protein H; TrEMBL-Plants: tr|A0A151RG92|A0A151RG92_CAJCA Putative respiratory burst oxidase isogeny protein H; Found in the gene: LotjaGi1g1v0581800 LjG1.1_chr1 112107933 112113322 -
n.a. Calcium-dependent protein kinase; TAIR: AT3G24110.1 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q9LRN6|CML22_ARATH Probable calcium-binding protein CML22; TrEMBL-Plants: tr|I3S8Q5|I3S8Q5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0597400 LjG1.1_chr1 113701269 113707054 +
n.a. Calcium-dependent protein kinase; TAIR: AT3G24110.1 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q9LRN6|CML22_ARATH Probable calcium-binding protein CML22; TrEMBL-Plants: tr|I3S8Q5|I3S8Q5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0597400 LjG1.1_chr1 113701269 113707054 +
n.a. Calcium-binding protein; TAIR: AT1G76650.1 calmodulin-like 38; Swiss-Prot: sp|Q8RYJ8|CML19_ORYSJ Putative calcium-binding protein CML19; TrEMBL-Plants: tr|G7KNL8|G7KNL8_MEDTR EF hand calcium-binding family protein; Found in the gene: LotjaGi1g1v0622200 LjG1.1_chr1 116955433 116956292 +
n.a. Mitochondrial carrier-like protein; TAIR: AT5G51050.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|Q5XHA0|SCMC1_XENTR Calcium-binding mitochondrial carrier protein SCaMC-1; TrEMBL-Plants: tr|I1N833|I1N833_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0635500 LjG1.1_chr1 119037954 119041651 +
n.a. Mitochondrial carrier-like protein; TAIR: AT5G51050.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|Q7T0U6|SCM1B_XENLA Calcium-binding mitochondrial carrier protein SCaMC-1-B; TrEMBL-Plants: tr|I1N833|I1N833_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0635500 LjG1.1_chr1 119038356 119041040 +
n.a. Calmodulin-related protein; TAIR: AT3G43810.2 calmodulin 7; Swiss-Prot: sp|P27164|CALM3_PETHY Calmodulin-related protein; TrEMBL-Plants: tr|A0A1I9LPJ2|A0A1I9LPJ2_ARATH Calmodulin 7; Found in the gene: LotjaGi1g1v0653000 LjG1.1_chr1 121230520 121232843 -
n.a. Calmodulin; TAIR: AT3G43810.2 calmodulin 7; Swiss-Prot: sp|P62200|CALM1_DAUCA Calmodulin-1/11/16; TrEMBL-Plants: tr|A0A1D6K120|A0A1D6K120_MAIZE Uncharacterized protein; Found in the gene: LotjaGi1g1v0653000 LjG1.1_chr1 121231013 121231420 -
n.a. Calmodulin; TAIR: AT3G43810.2 calmodulin 7; Swiss-Prot: sp|P62200|CALM1_DAUCA Calmodulin-1/11/16; TrEMBL-Plants: tr|A0A1D6K120|A0A1D6K120_MAIZE Uncharacterized protein; Found in the gene: LotjaGi1g1v0653000 LjG1.1_chr1 121231013 121232182 -
n.a. Calmodulin-related protein; TAIR: AT2G41110.2 calmodulin 2; Swiss-Prot: sp|P27164|CALM3_PETHY Calmodulin-related protein; TrEMBL-Plants: tr|F4IJ46|F4IJ46_ARATH Calmodulin 2; Found in the gene: LotjaGi1g1v0653000 LjG1.1_chr1 121231013 121232182 -
n.a. Calmodulin; TAIR: AT3G43810.2 calmodulin 7; Swiss-Prot: sp|P62200|CALM1_DAUCA Calmodulin-1/11/16; TrEMBL-Plants: tr|B9EV45|B9EV45_ORYSJ Uncharacterized protein; Found in the gene: LotjaGi1g1v0653000 LjG1.1_chr1 121231013 121232182 -
n.a. Calmodulin-like protein; TAIR: AT3G07490.1 ARF-GAP domain 11; Swiss-Prot: sp|Q9SRR7|CML3_ARATH Calmodulin-like protein 3; TrEMBL-Plants: tr|I3RZK4|I3RZK4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0663300 LjG1.1_chr1 122453527 122454656 +
n.a. Calmodulin, putative; TAIR: AT3G22930.1 calmodulin-like 11; Swiss-Prot: sp|Q9LIK5|CML11_ARATH Calmodulin-like protein 11; TrEMBL-Plants: tr|C6T303|C6T303_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0715200 LjG1.1_chr1 128313163 128314908 +
n.a. protein kinase family protein; TAIR: AT3G57530.1 calcium-dependent protein kinase 32; Swiss-Prot: sp|Q6NLQ6|CDPKW_ARATH Calcium-dependent protein kinase 32; TrEMBL-Plants: tr|A0A151TU37|A0A151TU37_CAJCA Calcium-dependent protein kinase 32; Found in the gene: LotjaGi1g1v0719700 LjG1.1_chr1 129007447 129012804 +
n.a. TLD domain-containing protein 1; TAIR: AT5G06260.1 TLD-domain containing nucleolar protein; Swiss-Prot: sp|Q8K0P3|TLDC1_MOUSE TLD domain-containing protein 1; TrEMBL-Plants: tr|A0A072U385|A0A072U385_MEDTR TLD-domain nucleolar protein; Found in the gene: LotjaGi1g1v0734900 LjG1.1_chr1 130835983 130845636 -
n.a. TLD domain-containing protein 1; TAIR: AT5G06260.1 TLD-domain containing nucleolar protein; Swiss-Prot: sp|Q8K0P3|TLDC1_MOUSE TLD domain-containing protein 1; TrEMBL-Plants: tr|A0A072U385|A0A072U385_MEDTR TLD-domain nucleolar protein; Found in the gene: LotjaGi1g1v0734900 LjG1.1_chr1 130836524 130845511 -
n.a. Respiratory burst oxidase-like protein; TAIR: AT1G09090.2 respiratory burst oxidase-like protein; Swiss-Prot: sp|Q948T9|RBOHB_SOLTU Respiratory burst oxidase homolog protein B; TrEMBL-Plants: tr|I1NBY2|I1NBY2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0771200 LjG1.1_chr1 134376966 134383247 -
n.a. Calcium-binding EF hand protein, putative; TAIR: AT5G28830.1 calcium-binding EF hand family protein; Swiss-Prot: sp|A7MY25|PUR5_VIBCB Phosphoribosylformylglycinamidine cyclo-ligase; TrEMBL-Plants: tr|I1NC93|I1NC93_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0780900 LjG1.1_chr1 135319921 135323685 -
n.a. Calmodulin; TAIR: AT2G27030.3 calmodulin 5; Swiss-Prot: sp|P04464|CALM_WHEAT Calmodulin; TrEMBL-Plants: tr|C6T231|C6T231_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0781100 LjG1.1_chr1 135357121 135363143 +
n.a. Calmodulin; TAIR: AT3G22930.1 calmodulin-like 11; Swiss-Prot: sp|Q9LIK5|CML11_ARATH Calmodulin-like protein 11; TrEMBL-Plants: tr|C6T231|C6T231_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0781100 LjG1.1_chr1 135357121 135363143 +
n.a. Calmodulin; TAIR: AT3G22930.1 calmodulin-like 11; Swiss-Prot: sp|Q9LIK5|CML11_ARATH Calmodulin-like protein 11; TrEMBL-Plants: tr|C6T231|C6T231_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0781100 LjG1.1_chr1 135357121 135363143 +
n.a. Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha; TAIR: AT5G28850.2 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q5QIT3|2AB2B_ARATH Serine/threonine protein phosphatase 2A regulatory subunit B''beta; TrEMBL-Plants: tr|I1JRS9|I1JRS9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0785500 LjG1.1_chr1 135800969 135810758 +
n.a. Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha; TAIR: AT5G28850.2 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q5QIT3|2AB2B_ARATH Serine/threonine protein phosphatase 2A regulatory subunit B''beta; TrEMBL-Plants: tr|I1JRS9|I1JRS9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0785500 LjG1.1_chr1 135801380 135809656 +
n.a. Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha; TAIR: AT5G28850.2 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q5QIT3|2AB2B_ARATH Serine/threonine protein phosphatase 2A regulatory subunit B''beta; TrEMBL-Plants: tr|I1JRS9|I1JRS9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0785500 LjG1.1_chr1 135801380 135809656 +
n.a. Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha; TAIR: AT1G54450.1 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q9SLI8|2AB2D_ARATH Probable serine/threonine protein phosphatase 2A regulatory subunit B''delta; TrEMBL-Plants: tr|A0A0S3S509|A0A0S3S509_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0785500 LjG1.1_chr1 135806014 135809656 +
n.a. Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha; TAIR: AT5G28850.2 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q5QIT3|2AB2B_ARATH Serine/threonine protein phosphatase 2A regulatory subunit B''beta; TrEMBL-Plants: tr|K7N069|K7N069_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0785500 LjG1.1_chr1 135806894 135809656 +
n.a. protein kinase family protein; TAIR: AT2G46700.1 CDPK-related kinase 3; Swiss-Prot: sp|Q9ZUZ2|CAMK3_ARATH CDPK-related kinase 3; TrEMBL-Plants: tr|G7L528|G7L528_MEDTR Calmodulin-domain kinase CDPK protein; Found in the gene: LotjaGi1g1v0795700 LjG1.1_chr1 136632988 136640554 -
n.a. protein kinase family protein; TAIR: AT2G46700.1 CDPK-related kinase 3; Swiss-Prot: sp|Q9ZUZ2|CAMK3_ARATH CDPK-related kinase 3; TrEMBL-Plants: tr|G7L528|G7L528_MEDTR Calmodulin-domain kinase CDPK protein; Found in the gene: LotjaGi1g1v0795700 LjG1.1_chr1 136633382 136640129 -
n.a. Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha; TAIR: AT5G28850.2 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q5QIT3|2AB2B_ARATH Serine/threonine protein phosphatase 2A regulatory subunit B''beta; TrEMBL-Plants: tr|K7N069|K7N069_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0003000_LC LjG1.1_chr2 1338557 1344830 -
n.a. Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha; TAIR: AT5G28850.2 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q5QIT3|2AB2B_ARATH Serine/threonine protein phosphatase 2A regulatory subunit B''beta; TrEMBL-Plants: tr|K7N069|K7N069_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0003000_LC LjG1.1_chr2 1339634 1344862 -
n.a. Calcium binding family protein; TAIR: AT1G24620.1 EF hand calcium-binding protein family; Swiss-Prot: sp|Q9FYK2|CML25_ARATH Probable calcium-binding protein CML25; TrEMBL-Plants: tr|I3S3Q8|I3S3Q8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0070600 LjG1.1_chr2 17355382 17356559 -
n.a. Mitochondrial carrier protein, putative; TAIR: AT2G35800.1 mitochondrial substrate carrier family protein; Swiss-Prot: sp|B0G159|MCFC_DICDI Mitochondrial substrate carrier family protein C; TrEMBL-Plants: tr|A0A1J7GLW4|A0A1J7GLW4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0100800 LjG1.1_chr2 33472787 33484861 -
n.a. Mitochondrial carrier protein, putative; TAIR: AT2G35800.1 mitochondrial substrate carrier family protein; Swiss-Prot: sp|B0G159|MCFC_DICDI Mitochondrial substrate carrier family protein C; TrEMBL-Plants: tr|A0A1J7GLW4|A0A1J7GLW4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0100800 LjG1.1_chr2 33472787 33484861 -
n.a. Calcium binding protein; TAIR: AT1G18210.1 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q9M7R0|ALL8_OLEEU Calcium-binding allergen Ole e 8; TrEMBL-Plants: tr|A0A0L9VHT1|A0A0L9VHT1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0198000 LjG1.1_chr2 63295354 63297441 +
n.a. Cell division cycle and apoptosis regulator protein 1; TAIR: AT2G03150.1 ATP/GTP-binding protein family; Swiss-Prot: sp|Q8IX12|CCAR1_HUMAN Cell division cycle and apoptosis regulator protein 1; TrEMBL-Plants: tr|I1JE70|I1JE70_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0301100 LjG1.1_chr2 77536352 77545937 +
n.a. protein kinase family protein; TAIR: AT2G17890.1 calcium-dependent protein kinase 16; Swiss-Prot: sp|Q7XJR9|CDPKG_ARATH Calcium-dependent protein kinase 16; TrEMBL-Plants: tr|V7CKU1|V7CKU1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0381200 LjG1.1_chr2 87761451 87767944 -
n.a. protein kinase family protein; TAIR: AT2G17890.1 calcium-dependent protein kinase 16; Swiss-Prot: sp|Q7XJR9|CDPKG_ARATH Calcium-dependent protein kinase 16; TrEMBL-Plants: tr|Q5D875|Q5D875_MEDTR Calcium-dependent kinase; Found in the gene: LotjaGi2g1v0381200 LjG1.1_chr2 87762743 87766232 -
n.a. protein kinase family protein; TAIR: AT2G17890.1 calcium-dependent protein kinase 16; Swiss-Prot: sp|Q7XJR9|CDPKG_ARATH Calcium-dependent protein kinase 16; TrEMBL-Plants: tr|Q5D875|Q5D875_MEDTR Calcium-dependent kinase; Found in the gene: LotjaGi2g1v0381200 LjG1.1_chr2 87762743 87766745 -
n.a. protein kinase family protein; TAIR: AT2G17890.1 calcium-dependent protein kinase 16; Swiss-Prot: sp|Q7XJR9|CDPKG_ARATH Calcium-dependent protein kinase 16; TrEMBL-Plants: tr|Q5D875|Q5D875_MEDTR Calcium-dependent kinase; Found in the gene: LotjaGi2g1v0381200 LjG1.1_chr2 87762743 87767011 -
n.a. protein kinase family protein; TAIR: AT5G66210.1 calcium-dependent protein kinase 28; Swiss-Prot: sp|Q9FKW4|CDPKS_ARATH Calcium-dependent protein kinase 28; TrEMBL-Plants: tr|A0A0B2RNC7|A0A0B2RNC7_GLYSO Calcium-dependent protein kinase 28; Found in the gene: LotjaGi2g1v0381200 LjG1.1_chr2 87762743 87767437 -
n.a. protein kinase family protein; TAIR: AT5G66210.1 calcium-dependent protein kinase 28; Swiss-Prot: sp|Q9FKW4|CDPKS_ARATH Calcium-dependent protein kinase 28; TrEMBL-Plants: tr|A0A0B2RNC7|A0A0B2RNC7_GLYSO Calcium-dependent protein kinase 28; Found in the gene: LotjaGi2g1v0381200 LjG1.1_chr2 87762743 87767437 -
n.a. protein kinase family protein; TAIR: AT5G66210.1 calcium-dependent protein kinase 28; Swiss-Prot: sp|Q9FKW4|CDPKS_ARATH Calcium-dependent protein kinase 28; TrEMBL-Plants: tr|A0A0B2RNC7|A0A0B2RNC7_GLYSO Calcium-dependent protein kinase 28; Found in the gene: LotjaGi2g1v0381200 LjG1.1_chr2 87762743 87767437 -
n.a. Calcium binding protein; TAIR: AT2G15680.1 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q9ZQE6|CML1_ARATH Calmodulin-like protein 1; TrEMBL-Plants: tr|I1LHF1|I1LHF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0400500 LjG1.1_chr2 89810164 89811408 -
n.a. Calcineurin B-like protein; TAIR: AT4G17615.1 calcineurin B-like protein 1; Swiss-Prot: sp|Q7XC27|CNBL1_ORYSJ Calcineurin B-like protein 1; TrEMBL-Plants: tr|A0A1J7GX32|A0A1J7GX32_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0418600 LjG1.1_chr2 91684522 91688907 -
n.a. Calmodulin, putative; TAIR: AT1G12310.1 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q94AZ4|CML13_ARATH Probable calcium-binding protein CML13; TrEMBL-Plants: tr|A0A1J7I7M8|A0A1J7I7M8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0426600 LjG1.1_chr2 92431547 92443169 -
n.a. Calmodulin, putative; TAIR: AT1G12310.1 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q94AZ4|CML13_ARATH Probable calcium-binding protein CML13; TrEMBL-Plants: tr|A0A1J7I7M8|A0A1J7I7M8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0426600 LjG1.1_chr2 92442508 92442951 -