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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013210
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 576 results. Now displaying 6 of 12 with 50 rows per page. This search has taken 5.783s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj5g3v2182520.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400-like [Glycine max] gi|356534353|ref|XP_003535720.1| chr5 31606675 31609907 +
2 domain predictions
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Lj5g3v2240970.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357439027|ref|XP_003589790.1| chr5 32249647 32253382 -
2 domain predictions
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Lj5g3v2241160.1
n.a. n.a. chr5 32333963 32352193 -
2 domain predictions
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Lj5g3v2241190.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357439013|ref|XP_003589783.1| chr5 32344650 32347544 +
2 domain predictions
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Lj5g3v2262850.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like isoform X1 [Cicer arietinum] gi|502121291|ref|XP_004497258.1| chr5 32966298 32970450 -
2 domain predictions
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Lj6g3v0292020.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502135214|ref|XP_004502257.1| chr6 3039180 3043267 -
2 domain predictions
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Lj6g3v0937000.1
n.a. PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3-like [Glycine max] gi|356524179|ref|XP_003530709.1| chr6 10505425 10509706 +
2 domain predictions
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Lj6g3v1048910.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g30520-like [Cicer arietinum] gi|502150060|ref|XP_004507770.1| chr6 11822492 11827633 -
2 domain predictions
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Lj6g3v1088810.1
n.a. n.a. chr6 13090002 13094021 +
2 domain predictions
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Lj6g3v1088820.1
n.a. PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Glycine max] gi|356556623|ref|XP_003546623.1| chr6 13090972 13094433 -
2 domain predictions
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Lj6g3v1416970.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356558217|ref|XP_003547404.1| chr6 16800612 16805651 +
2 domain predictions
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Lj6g3v1812070.1
n.a. PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8-like [Glycine max] gi|356555690|ref|XP_003546163.1| chr6 20206237 20227175 -
2 domain predictions
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Lj6g3v1984480.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Cicer arietinum] gi|502078346|ref|XP_004485915.1| chr6 22994480 23002442 +
2 domain predictions
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Lj6g3v1984520.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45780-like [Glycine max] gi|356549178|ref|XP_003542974.1| chr6 23007668 23012479 -
2 domain predictions
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Lj6g3v1984660.1
n.a. Protein STRUBBELIG-RECEPTOR FAMILY [Medicago truncatula] gi|358345451|ref|XP_003636791.1| chr6 23069896 23075621 -
2 domain predictions
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Lj6g3v1984660.2
n.a. Protein STRUBBELIG-RECEPTOR FAMILY [Medicago truncatula] gi|358345451|ref|XP_003636791.1| chr6 23069896 23075621 -
2 domain predictions
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Lj6g3v2006600.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like isoform X1 [Cicer arietinum] gi|502078099|ref|XP_004485839.1| chr6 23569077 23573317 -
2 domain predictions
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Lj6g3v2218770.1
n.a. PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform 1 [Glycine max] gi|356558614|ref|XP_003547599.1| chr6 25872841 25876354 -
2 domain predictions
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Lj6g3v2275150.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357445293|ref|XP_003592924.1| chr6 26743478 26748785 -
2 domain predictions
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LotjaGi1g1v0010700.1
n.a. Leucine-rich repeat receptor-like protein kinase family; TAIR: AT3G12610.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|Q00874|DR100_ARATH DNA damage-repair/toleration protein DRT100; TrEMBL-Plants: tr|Q708X5|Q708X5_CICAR Leucine rich repeat protein; Found in the gene: LotjaGi1g1v0010700 LjG1.1_chr1 1312179 1314291 -
2 domain predictions
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LotjaGi1g1v0013500.1
n.a. Receptor protein kinase-like protein; TAIR: AT5G56040.2 Leucine-rich receptor-like protein kinase family protein; Swiss-Prot: sp|C0LGR3|Y4265_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g26540; TrEMBL-Plants: tr|V4UNP7|V4UNP7_9ROSI Uncharacterized protein; Found in the gene: LotjaGi1g1v0013500 LjG1.1_chr1 1758440 1762785 -
2 domain predictions
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LotjaGi1g1v0023100.1
n.a. Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT1G45616.1 receptor like protein 6; Swiss-Prot: sp|Q9C9H7|RLP12_ARATH Receptor-like protein 12; TrEMBL-Plants: tr|A0A0R0FYQ0|A0A0R0FYQ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0023100 LjG1.1_chr1 2798242 2804818 -
2 domain predictions
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LotjaGi1g1v0036000.1
n.a. Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT1G45616.1 receptor like protein 6; Swiss-Prot: sp|Q9C9H7|RLP12_ARATH Receptor-like protein 12; TrEMBL-Plants: tr|G7KHF1|G7KHF1_MEDTR Receptor-like protein; Found in the gene: LotjaGi1g1v0036000 LjG1.1_chr1 5037982 5041321 +
2 domain predictions
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LotjaGi1g1v0056100.1
n.a. Leucine-rich repeat receptor-like protein kinase family; TAIR: AT3G43740.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|B8BB68|BAK1_ORYSI LRR receptor kinase BAK1; TrEMBL-Plants: tr|I3STZ2|I3STZ2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0056100 LjG1.1_chr1 7881627 7885030 +
2 domain predictions
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LotjaGi1g1v0056200.1
n.a. Leucine-rich repeat receptor-like protein kinase family; TAIR: AT5G21090.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; TrEMBL-Plants: tr|I3STZ2|I3STZ2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0056200 LjG1.1_chr1 7886934 7891233 +
2 domain predictions
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LotjaGi1g1v0056600.1
n.a. Receptor protein kinase, putative; TAIR: AT2G27060.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q0WR59|Y5020_ARATH Probable inactive receptor kinase At5g10020; TrEMBL-Plants: tr|A0A0B2S194|A0A0B2S194_GLYSO Putative inactive receptor kinase; Found in the gene: LotjaGi1g1v0056600 LjG1.1_chr1 7921733 7927535 +
2 domain predictions
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LotjaGi1g1v0056600.2
n.a. Receptor protein kinase, putative; TAIR: AT2G27060.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q0WR59|Y5020_ARATH Probable inactive receptor kinase At5g10020; TrEMBL-Plants: tr|A0A0B2S194|A0A0B2S194_GLYSO Putative inactive receptor kinase; Found in the gene: LotjaGi1g1v0056600 LjG1.1_chr1 7921749 7927584 +
2 domain predictions
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LotjaGi1g1v0056600.3
n.a. Receptor protein kinase, putative; TAIR: AT2G27060.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q0WR59|Y5020_ARATH Probable inactive receptor kinase At5g10020; TrEMBL-Plants: tr|A0A0B2S194|A0A0B2S194_GLYSO Putative inactive receptor kinase; Found in the gene: LotjaGi1g1v0056600 LjG1.1_chr1 7922166 7927475 +
2 domain predictions
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LotjaGi1g1v0056600.4
n.a. Receptor protein kinase, putative; TAIR: AT2G27060.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q0WR59|Y5020_ARATH Probable inactive receptor kinase At5g10020; TrEMBL-Plants: tr|A0A0B2S194|A0A0B2S194_GLYSO Putative inactive receptor kinase; Found in the gene: LotjaGi1g1v0056600 LjG1.1_chr1 7922948 7927381 +
2 domain predictions
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LotjaGi1g1v0063200.1
n.a. Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT2G34930.1 disease resistance family protein / LRR family protein; Swiss-Prot: sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1; TrEMBL-Plants: tr|A0A072UGF0|A0A072UGF0_MEDTR Leucine-rich receptor-like kinase family protein; Found in the gene: LotjaGi1g1v0063200 LjG1.1_chr1 8775403 8779917 -
2 domain predictions
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LotjaGi1g1v0066400.1
n.a. Receptor protein kinase-like protein; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|G7K7I9|G7K7I9_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi1g1v0066400 LjG1.1_chr1 9162776 9166796 -
2 domain predictions
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LotjaGi1g1v0073400.1
n.a. Receptor-like kinase; TAIR: AT3G56100.1 meristematic receptor-like kinase; Swiss-Prot: sp|C0LGP9|IMK3_ARATH Probable leucine-rich repeat receptor-like protein kinase IMK3; TrEMBL-Plants: tr|A0A0R0G9R2|A0A0R0G9R2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0073400 LjG1.1_chr1 10260029 10268994 +
2 domain predictions
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LotjaGi1g1v0073400.2
n.a. Receptor-like kinase; TAIR: AT3G56100.1 meristematic receptor-like kinase; Swiss-Prot: sp|C0LGP9|IMK3_ARATH Probable leucine-rich repeat receptor-like protein kinase IMK3; TrEMBL-Plants: tr|A0A072UGN2|A0A072UGN2_MEDTR LRR receptor-like kinase; Found in the gene: LotjaGi1g1v0073400 LjG1.1_chr1 10261040 10263806 +
2 domain predictions
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LotjaGi1g1v0073400.3
n.a. Receptor-like kinase; TAIR: AT3G56100.1 meristematic receptor-like kinase; Swiss-Prot: sp|C0LGP9|IMK3_ARATH Probable leucine-rich repeat receptor-like protein kinase IMK3; TrEMBL-Plants: tr|A0A0R0G9R2|A0A0R0G9R2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0073400 LjG1.1_chr1 10261159 10263806 +
2 domain predictions
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LotjaGi1g1v0074900.1
n.a. Protein kinase family protein, putative, expressed; TAIR: AT4G18640.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|C0LGQ4|MDIS2_ARATH Protein MALE DISCOVERER 2; TrEMBL-Plants: tr|A0A151U1E4|A0A151U1E4_CAJCA Putative LRR receptor-like serine/threonine-protein kinase MRH1; Found in the gene: LotjaGi1g1v0074900 LjG1.1_chr1 10821142 10841992 +
2 domain predictions
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LotjaGi1g1v0095000.1
n.a. Receptor-like kinase; TAIR: AT1G48480.1 receptor-like kinase 1; Swiss-Prot: sp|Q9LP77|Y1848_ARATH Probable inactive receptor kinase At1g48480; TrEMBL-Plants: tr|V7B7Q2|V7B7Q2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0095000 LjG1.1_chr1 14378690 14382429 -
2 domain predictions
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LotjaGi1g1v0097100.1
n.a. Receptor protein kinase, putative; TAIR: AT1G66150.1 transmembrane kinase 1; Swiss-Prot: sp|P43298|TMK1_ARATH Receptor protein kinase TMK1; TrEMBL-Plants: tr|A0A1J7HRR5|A0A1J7HRR5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0097100 LjG1.1_chr1 14717096 14721753 -
2 domain predictions
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LotjaGi1g1v0104700.1
n.a. Protein kinase-like protein; TAIR: AT1G06840.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|C0LGD7|Y1684_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g06840; TrEMBL-Plants: tr|A0A151RLC2|A0A151RLC2_CAJCA Putative LRR receptor-like serine/threonine-protein kinase family; Found in the gene: LotjaGi1g1v0104700 LjG1.1_chr1 16127516 16139967 -
2 domain predictions
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LotjaGi1g1v0104900.1
n.a. Receptor-like kinase; TAIR: AT5G58300.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9LVM0|Y5830_ARATH Probable inactive receptor kinase At5g58300; TrEMBL-Plants: tr|I1JHM8|I1JHM8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0104900 LjG1.1_chr1 16203436 16207721 +
2 domain predictions
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LotjaGi1g1v0104900.2
n.a. Receptor-like kinase; TAIR: AT5G58300.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9LVM0|Y5830_ARATH Probable inactive receptor kinase At5g58300; TrEMBL-Plants: tr|I1JHM8|I1JHM8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0104900 LjG1.1_chr1 16205066 16207425 +
2 domain predictions
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LotjaGi1g1v0170600.1
n.a. Receptor-like kinase; TAIR: AT4G23740.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9SUQ3|Y4374_ARATH Probable inactive receptor kinase At4g23740; TrEMBL-Plants: tr|I1MAH0|I1MAH0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0170600 LjG1.1_chr1 32484299 32488453 +
2 domain predictions
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LotjaGi1g1v0193400.1
n.a. Receptor kinase; TAIR: AT1G74360.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|C0LGJ1|Y1743_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g74360; TrEMBL-Plants: tr|A0A0S3RGK7|A0A0S3RGK7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0193400 LjG1.1_chr1 38277335 38281595 -
2 domain predictions
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LotjaGi1g1v0202100.1
n.a. Receptor-like kinase; TAIR: AT2G26730.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|O48788|Y2267_ARATH Probable inactive receptor kinase At2g26730; TrEMBL-Plants: tr|A0A1J7HE04|A0A1J7HE04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0202100 LjG1.1_chr1 42976518 42979890 -
2 domain predictions
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LotjaGi1g1v0214600.1
n.a. Receptor-like protein kinase; TAIR: AT5G62710.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|C0LGF4|FEI1_ARATH LRR receptor-like serine/threonine-protein kinase FEI 1; TrEMBL-Plants: tr|K7KVW3|K7KVW3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0214600 LjG1.1_chr1 47296939 47302190 +
2 domain predictions
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LotjaGi1g1v0214600.2
n.a. Receptor-like protein kinase; TAIR: AT5G62710.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|C0LGF4|FEI1_ARATH LRR receptor-like serine/threonine-protein kinase FEI 1; TrEMBL-Plants: tr|K7KVW3|K7KVW3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0214600 LjG1.1_chr1 47296939 47302212 +
2 domain predictions
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LotjaGi1g1v0275900.1
n.a. Receptor protein kinase; TAIR: AT5G48940.1 Leucine-rich repeat transmembrane protein kinase family protein; Swiss-Prot: sp|C0LGV1|RCH1_ARATH LRR receptor-like serine/threonine-protein kinase RCH1; TrEMBL-Plants: tr|I1JYW5|I1JYW5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0275900 LjG1.1_chr1 67459819 67465951 -
2 domain predictions
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LotjaGi1g1v0276800.1
n.a. Receptor-like kinase; TAIR: AT4G23740.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9SUQ3|Y4374_ARATH Probable inactive receptor kinase At4g23740; TrEMBL-Plants: tr|A0A0B2SJ34|A0A0B2SJ34_GLYSO Putative inactive receptor kinase; Found in the gene: LotjaGi1g1v0276800 LjG1.1_chr1 67762475 67770657 -
2 domain predictions
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LotjaGi1g1v0295000.1
n.a. Receptor-kinase, putative; TAIR: AT3G47570.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570; TrEMBL-Plants: tr|G7J897|G7J897_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi1g1v0295000 LjG1.1_chr1 71475538 71482360 -
2 domain predictions
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LotjaGi1g1v0304100.1
n.a. Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT2G34930.1 disease resistance family protein / LRR family protein; Swiss-Prot: sp|Q9FIZ3|GSO2_ARATH LRR receptor-like serine/threonine-protein kinase GSO2; TrEMBL-Plants: tr|A0A072U675|A0A072U675_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi1g1v0304100 LjG1.1_chr1 74195756 74202939 -
2 domain predictions
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LotjaGi1g1v0304900.2
n.a. Receptor-like kinase; TAIR: AT5G58300.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9LVM0|Y5830_ARATH Probable inactive receptor kinase At5g58300; TrEMBL-Plants: tr|A0A0B2R180|A0A0B2R180_GLYSO Putative inactive receptor kinase; Found in the gene: LotjaGi1g1v0304900 LjG1.1_chr1 74383284 74388698 +
2 domain predictions
 –